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Merge pull request #54 from paxtonfitzpatrick/master
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fixes and cleanup for bibchecker
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@jeremymanning
jeremymanning authored Nov 8, 2021
2 parents 9309c0c + 31ab9bf commit bb735e4
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4 changes: 3 additions & 1 deletion bibcheck/caps.txt
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Expand Up @@ -380,4 +380,6 @@ WAISIII
WAIS
Wechsler
Pyparse
Landauer
Landauer
EMBS
BHI
70 changes: 10 additions & 60 deletions cdl.bib
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@@ -1,9 +1,5 @@


@article{FinnBand21,
author = {E S Finn and P A Bandettini},
date-added = {2021-10-27 22:57:39 -0400},
date-modified = {2021-10-27 22:58:15 -0400},
journal = {{NeuroImage}},
pages = {117963},
title = {Movie-watching outperforms rest for functional connectivity-based prediction of behavior},
Expand All @@ -12,8 +8,6 @@ @article{FinnBand21

@article{FinnRose21,
author = {E S Finn and M D Rosenberg},
date-added = {2021-10-27 22:56:53 -0400},
date-modified = {2021-10-27 22:57:32 -0400},
journal = {{NeuroImage}},
pages = {118254},
title = {Beyond fingerprinting: choosing predictive connectomes over reliable connectomes},
Expand All @@ -22,17 +16,13 @@ @article{FinnRose21

@article{Finn21,
author = {E S Finn},
date-added = {2021-10-27 22:55:50 -0400},
date-modified = {2021-10-27 22:56:26 -0400},
journal = {Trends in Cognitive Sciences},
title = {Is it time to put rest to rest?},
volume = {doi.org/10.1016/j.tics.2021.09.005},
year = {2021}}

@article{MurpEtal13,
author = {K Murphy and R M Birn and P A Bandettini},
date-added = {2021-10-27 22:54:48 -0400},
date-modified = {2021-10-27 22:55:24 -0400},
journal = {{NeuroImage}},
pages = {349--359},
title = {Resting-state {fMRI} confounds and cleanup},
Expand All @@ -41,8 +31,6 @@ @article{MurpEtal13

@article{SmitEtal13c,
author = {S M Smith and D Vidaurre and C F Beckmann and M F Glasser and M Jenkinson and K L Miller and T E Nichols and E C Robinson and G Salimi-Khorshidi and M W Woolrich and D M Barch and K U{\u{g}}urbil and D C {Van Essen}},
date-added = {2021-10-27 22:53:31 -0400},
date-modified = {2021-10-27 22:54:43 -0400},
journal = {Trends in Cognitive Sciences},
number = {12},
pages = {666--682},
Expand All @@ -52,9 +40,7 @@ @article{SmitEtal13c

@article{LeeEtal13,
author = {M H Lee and C D Smyser and J S Shimony},
date-added = {2021-10-27 22:52:38 -0400},
date-modified = {2021-10-27 22:53:25 -0400},
journal = {American Journal of Neuroradiology},
journal = {{American} Journal of Neuroradiology},
number = {10},
pages = {1866--1872},
title = {Resting-state {fMRI}: a review of methods and clinical applications},
Expand All @@ -63,8 +49,6 @@ @article{LeeEtal13

@article{SmitEtal13b,
author = {S M Smith and C F Beckmann and J Andersson and E J Auerbach and J Bijsterbosch and G Douaud and E Duff and D A Feinberg and L Griffanti and M P Harms and M Kelly and T Laumann and K L Miller and S Moeller and S Peterson and J Power and G Salimi-Khorshidi and A Z Snyder and A T Vu and M W Woolrich and J Xu and E Yacoub and K U{\u{g}}urbil and D C {Van Essen} and M F Glasser},
date-added = {2021-10-27 22:49:31 -0400},
date-modified = {2021-10-27 22:52:27 -0400},
journal = {{NeuroImage}},
pages = {144--168},
title = {Resting-state {fMRI} in the {Human Connectome Project}},
Expand All @@ -73,17 +57,13 @@ @article{SmitEtal13b

@article{GralFinn21,
author = {C Grall and E S Finn},
date-added = {2021-10-27 22:21:50 -0400},
date-modified = {2021-10-27 22:24:22 -0400},
journal = {{PsyArXiv}},
title = {Leveraging the power of media to drive cognition: a media-informed approach to naturalistic neuroscience},
volume = {doi.org/10.31234/osf.io/c8z9t},
year = {2021}}

@article{ChenEtal15b,
author = {J Chen and U Hasson and C J Honey},
date-added = {2021-10-27 10:59:50 -0400},
date-modified = {2021-10-27 11:00:24 -0400},
journal = {Neuron},
number = {2},
pages = {244--246},
Expand All @@ -93,8 +73,6 @@ @article{ChenEtal15b

@article{YeshEtal17,
author = {Y Yeshurun and S Swanson and E Simony and J Chen and C Lazaridi and C J Honey and U Hasson},
date-added = {2021-10-27 10:58:35 -0400},
date-modified = {2021-10-27 10:59:28 -0400},
journal = {Psychological Science},
number = {3},
pages = {307--319},
Expand All @@ -104,8 +82,6 @@ @article{YeshEtal17

@article{HaufEtal18,
author = {S Haufe and P {DeGuzman} and S Henin and M Arcaro and C J Honey and U Hasson and L C Parra},
date-added = {2021-10-27 10:57:11 -0400},
date-modified = {2021-10-27 10:58:21 -0400},
journal = {{NeuroImage}},
number = {1},
pages = {79--91},
Expand All @@ -115,17 +91,13 @@ @article{HaufEtal18

@article{GoldEtal21,
author = {A Goldstein and Z Zada and E Buchnik and M Schain and A Price and B Aubrey and S A Nastase and A Feder and D Emanuel and A Cohen and A Jansen and H Gazula and G Choe and A Rao and C Kim and C Casto and F Lora and A Flinker and S Devore and W Doyle and P Dugan and D Friedman and A Hassidim and M Brenner and Y Matias and K A Norman and O Devinsky and U Hasson},
date-added = {2021-10-27 10:55:03 -0400},
date-modified = {2021-10-27 10:56:55 -0400},
journal = {{bioRxiv}},
pages = {doi.org/10.1101/2020.12.02.403477},
title = {Thinking ahead: prediction in context as a keystone of language in humans and machines},
year = {2021}}

@article{NeelKeef89,
author = {J H Neely and D E Keefe},
date-added = {2021-10-27 10:54:06 -0400},
date-modified = {2021-10-27 10:54:51 -0400},
journal = {Psychology of Learning and Motivation},
pages = {207--248},
title = {Semantic context effects on visual word processing: a hybrid prospective-retrospective processing theory},
Expand All @@ -134,8 +106,6 @@ @article{NeelKeef89

@article{Beck80,
author = {C A Becker},
date-added = {2021-10-27 10:53:27 -0400},
date-modified = {2021-10-27 10:53:58 -0400},
journal = {Memory and Cognition},
pages = {493--512},
title = {Semantic context effects in visual word recognition: an analysis of semantic strategies},
Expand All @@ -144,8 +114,6 @@ @article{Beck80

@article{WoodMcDe18,
author = {K J P Woods and J H {McDermott}},
date-added = {2021-10-27 10:52:04 -0400},
date-modified = {2021-10-27 10:52:48 -0400},
journal = {Proceedings of the National Academy of Sciences, {USA}},
number = {14},
pages = {E3313--E3322},
Expand All @@ -155,19 +123,15 @@ @article{WoodMcDe18

@article{BraiFree97,
author = {D H Brainard and W T Freeman},
date-added = {2021-10-27 10:50:19 -0400},
date-modified = {2021-10-27 10:51:05 -0400},
journal = {Journal of the Optical Society of America A},
journal = {Journal of the Optical Society of America {A}},
number = {7},
pages = {1393--1411},
title = {Bayesian color constancy},
title = {{Bayesian} color constancy},
volume = {14},
year = {1997}}

@article{Fost11,
author = {D H Foster},
date-added = {2021-10-27 10:49:35 -0400},
date-modified = {2021-10-27 10:50:13 -0400},
journal = {Vision Research},
number = {7},
pages = {674--700},
Expand All @@ -177,8 +141,6 @@ @article{Fost11

@article{AlthEtal16,
author = {T Althoff and K Clark and J Leskovec},
date-added = {2021-10-26 21:36:29 -0400},
date-modified = {2021-10-26 21:37:27 -0400},
journal = {Transactions of the Association for Computational Linguistics},
pages = {463--476},
title = {Large-scale analysis of counseling conversations: an application of natural language processing to mental health},
Expand All @@ -187,8 +149,6 @@ @article{AlthEtal16

@article{LowEtal20,
author = {D M Low and L Rumker and T Talkar and J Torous and G Cecchi and S S Chosh},
date-added = {2021-10-26 21:35:09 -0400},
date-modified = {2021-10-26 21:36:24 -0400},
journal = {Journal of Medical Internet Research},
number = {10},
pages = {e22635},
Expand All @@ -198,27 +158,22 @@ @article{LowEtal20

@article{StewVelu21,
author = {R Stewart and S Velupillai},
date-added = {2021-10-26 21:34:07 -0400},
date-modified = {2021-10-26 21:38:24 -0400},
journal = {Neuropsychopharmacology},
pages = {252--253},
title = {Applied natural language processing in mental health big data},
volume = {46},
year = {2021}}

@article{CoppEtal17,
@inproceedings{CoppEtal17,
author = {G Coppersmith and C Hilland and O Frieder and R Leary},
date-added = {2021-10-26 21:32:51 -0400},
date-modified = {2021-10-26 21:34:02 -0400},
journal = {{IEEE} {Xplore}},
pages = {doi.org/10.1109/BHI.2017.7897288},
booktitle = {2017 {IEEE} {EMBS} International Conference on Biomedical \& Health Informatics {(BHI})},
organization = {IEEE},
pages = {393--396},
title = {Scalable mental health analysis in the clinical whitespace via natural language processing},
year = {2017}}

@article{CookEtal16,
author = {B J Cook and A M Progovac and P Chen and B Mullin and S Hou and E Baca-Garcia},
date-added = {2021-10-26 21:30:46 -0400},
date-modified = {2021-10-26 21:32:36 -0400},
journal = {Computational and Mathematical Methods in Medicine},
number = {8708434},
pages = {1--9},
Expand All @@ -228,7 +183,6 @@ @article{CookEtal16

@article{OnoEtal16,
author = {M Ono and G J Devilly and D H K Shum},
date-modified = {2021-10-26 21:13:23 -0400},
journal = {Psychological Trauma: Theory, Research, Practice, and Policy},
number = {2},
pages = {157--164},
Expand Down Expand Up @@ -361,14 +315,13 @@ @article{DalgWatt90

@techreport{CartEtal16,
author = {C Carter and N Cohen and J {DeVylder} and D Dickinson and D Fair and M Kutas and S Park and L Uddin},
date-modified = {2021-10-26 21:14:23 -0400},
institution = {National Institutes of Mental Health},
title = {Behavioral assessment methods for {RDoC} constructs: cognitive systems final report},
year = {2016}}
year = {2016},
force = {True}}

@article{MannEtal21,
author = {J R Manning and G M Notaro and E Chen and P C Fitzpatrick},
date-modified = {2021-10-27 22:27:03 -0400},
journal = {{bioRxiv}},
title = {Fitness tracking reveals task-specific associations between memory, mental health, and exercise},
volume = {doi.org/10.1101/2021.10.22.465441},
Expand Down Expand Up @@ -1712,8 +1665,7 @@ @article{AdacEtal12
year = {2012}}

@article{GoniEtal14,
author = {J Go{\~ n}i and M P van den Heuvel and A Avena-Koenigsberger and N V de Mendizabal and R F Betzel and A Griffa and P Hagmann and B Corominas-Murtra and J-P Thiran and O Sporns},
date-modified = {2021-10-27 22:28:35 -0400},
author = {J Go{\~n}i and M P van den Heuvel and A Avena-Koenigsberger and N V de Mendizabal and R F Betzel and A Griffa and P Hagmann and B Corominas-Murtra and J-P Thiran and O Sporns},
journal = {Proceedings of the National Academy of Sciences, {USA}},
number = {2},
pages = {833--838},
Expand Down Expand Up @@ -6177,7 +6129,6 @@ @article{Scho66
@incollection{ChenEtal15a,
author = {P-H Chen and J Chen and Y Yeshurun and U Hasson and J Haxby and P J Ramadge},
booktitle = {Advances in Neural Information Processing Systems},
date-modified = {2021-10-27 10:59:48 -0400},
editor = {C Cortes and N D Lawrence and D D Lee and M Sugiyama and R Garnett},
pages = {460--468},
publisher = {Curran Associates, Incorporated},
Expand Down Expand Up @@ -43763,7 +43714,6 @@ @article{HiggJohn09

@article{SmitEtal13a,
author = {T A Smith and A E Hasinksi and P B Sederberg},
date-modified = {2021-10-27 22:50:24 -0400},
journal = {Journal of Experimental Psychology: General},
title = {The context repetition effect: predicted events are remembered better, even when they don't happen},
volume = {In press},
Expand Down

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