Skip to content

UVP Version 2.3.1
Compare
Choose a tag to compare
@mezewudo mezewudo released this 27 Oct 17:53
· 76 commits to master since this release
v2.3.1
c9bc063

  1. Updated NC_000962.3.gbk file (for SnpEff annotation) to reflect ReSeqTB expert panel agreed gene names and IDs

  2. Updated BED type file of H37Rv genome loci

  3. Updated annotation interpretation custom script (parse_annotation.py) to customize updated version of ReSeqTB loci of interest list and upstream regions there in.

  4. Streamlined UVP to get rid of the resistance loci only annotation

  5. Simplified the deleted loci text file to capture only sample IDs, loci coordinates, gene names, gene IDs and variant type.

Assets 2
Loading