Create scripts folder for reference scripts

README.md

@@ -7,3 +7,4 @@
 Collection of utilities aimed at simplifying the creation and handling of ACCESS-OM3 runs. It currently includes:
   - functions to read and write ACCESS-OM3 configuration files
   - functions to read and process profiling data
+  - scripts to create the CICE grid file from an existing MOM grid file

scripts/README.md

@@ -0,0 +1,5 @@
+# Scripts
+
+This folder contains scripts which are the reference implementation of how to use software within OM3 utils.
+
+i.e. run `qsub pbs_make_cice_grids.sh` to create the cice grid for ACCESS-OM3 at all three standard resolutions. After sanity checking, these are then moved by hand to the desired folder to run the model.

scripts/pbs_make_cice_grids.sh

@@ -0,0 +1,33 @@
+#!/bin/bash
+
+#PBS -W umask=0022
+#PBS -l mem=24gb
+#PBS -l storage=gdata/ik11+gdata/tm70+gdata/hh5
+#PBS -l wd
+#PBS -j oe
+
+run='python3 ../om3utils/cice_grid.py'
+
+umask 0003
+
+module purge
+module use /g/data/hh5/public/modules
+module load conda/analysis3-23.10
+
+echo "1 degree"
+$run /g/data/ik11/inputs/access-om2/input_20201102/mom_1deg/ocean_hgrid.nc /g/data/ik11/inputs/access-om2/input_20201102/mom_1deg/ocean_mask.nc
+
+mkdir 1deg
+mv grid.nc kmt.nc 1deg
+
+echo "0.25 deg"
+$run /g/data/ik11/inputs/access-om2/input_20230515_025deg_topog/mom_025deg/ocean_hgrid.nc /g/data/ik11/inputs/access-om2/input_20230515_025deg_topog/mom_025deg/ocean_mask.nc
+
+mkdir 025deg
+mv grid.nc kmt.nc 025deg
+
+echo "01 deg"
+$run /g/data/ik11/inputs/access-om2/input_20201102/mom_01deg/ocean_hgrid.nc /g/data/ik11/inputs/access-om2/input_20201102/mom_01deg/ocean_mask.nc
+
+mkdir 01deg
+mv grid.nc kmt.nc 01deg