Run pytest using local conda installation #148

	name: CI

	on: [pull_request]

	jobs:
	pytest:

	runs-on: ubuntu-latest

	# This is required to activate conda environment in GitHub Actions:
	# See https://stackoverflow.com/questions/72703363/how-to-activate-conda-environment-in-github-actions
	defaults:
	run:
	shell: bash -l {0}

	steps:
	- uses: actions/checkout@v3
	- uses: conda-incubator/setup-miniconda@v2
	with:
	python-version: '3.9'
	auto-activate-base: false
	activate-environment: benchcab-dev
	environment-file: .conda/benchcab-dev.yaml
	- name: Test with pytest
	run: \|
	pytest --cov=./ --cov-report=xml
	- name: Upload coverage reports to Codecov
	uses: codecov/codecov-action@v3
	env:
	CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }}
	files: ./coverage.xml

	test_conda_package_install:

	runs-on: ubuntu-latest

	# This is required to activate conda environment in GitHub Actions:
	# See https://stackoverflow.com/questions/72703363/how-to-activate-conda-environment-in-github-actions
	defaults:
	run:
	shell: bash -l {0}

	steps:
	- uses: actions/checkout@v3
	#with:
	#fetch-depth: 0
	- uses: conda-incubator/setup-miniconda@v2
	with:
	python-version: '3.9'
	- name: Build and install conda package
	run: \|
	conda install conda-build
	conda build -c conda-forge -c accessnri -c coecms .
	conda install --no-channel-priority -c $CONDA_PREFIX/conda-bld -c conda-forge -c accessnri -c coecms benchcab
	conda uninstall conda-build
	- name: Pytest
	run: \|
	conda install pytest
	pytest

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