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add conversion from SAM to BAM #234

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add conversion from SAM to BAM

add conversion from SAM to BAM #234

Triggered via pull request March 20, 2024 10:39
@jonathanBielerjonathanBieler
synchronize #63
jonathanBieler:sam_to_bam
Status Success
Total duration 2m 14s
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10 warnings and 1 notice
Documentation: ../../../.julia/packages/Documenter/bYYzK/src/Utilities/Utilities.jl#L34
duplicate docs found for 'XAM.SAM.Header' in src/man/api.md:20-23 ```@autodocs Modules = [XAM.SAM] public = false ```
Documentation: ../../../.julia/packages/Documenter/bYYzK/src/Utilities/Utilities.jl#L34
duplicate docs found for 'XAM.SAM.MetaInfo' in src/man/api.md:20-23 ```@autodocs Modules = [XAM.SAM] public = false ```
Documentation: ../../../.julia/packages/Documenter/bYYzK/src/Utilities/Utilities.jl#L34
duplicate docs found for 'XAM.SAM.MetaInfo' in src/man/api.md:20-23 ```@autodocs Modules = [XAM.SAM] public = false ```
Documentation: ../../../.julia/packages/Documenter/bYYzK/src/Utilities/Utilities.jl#L34
duplicate docs found for 'XAM.SAM.Reader' in src/man/api.md:20-23 ```@autodocs Modules = [XAM.SAM] public = false ```
Documentation: ../../../.julia/packages/Documenter/bYYzK/src/Utilities/Utilities.jl#L34
duplicate docs found for 'XAM.SAM.Record' in src/man/api.md:20-23 ```@autodocs Modules = [XAM.SAM] public = false ```
Documentation: ../../../.julia/packages/Documenter/bYYzK/src/Utilities/Utilities.jl#L34
duplicate docs found for 'XAM.SAM.Record' in src/man/api.md:20-23 ```@autodocs Modules = [XAM.SAM] public = false ```
Documentation: ../../../.julia/packages/Documenter/bYYzK/src/Utilities/Utilities.jl#L34
duplicate docs found for 'XAM.SAM.Record' in src/man/api.md:20-23 ```@autodocs Modules = [XAM.SAM] public = false ```
Documentation: ../../../.julia/packages/Documenter/bYYzK/src/Utilities/Utilities.jl#L34
duplicate docs found for 'XAM.SAM.Writer' in src/man/api.md:20-23 ```@autodocs Modules = [XAM.SAM] public = false ```
Documentation: ../../../.julia/packages/Documenter/bYYzK/src/Utilities/Utilities.jl#L34
duplicate docs found for 'Base.findall' in src/man/api.md:20-23 ```@autodocs Modules = [XAM.SAM] public = false ```
Documentation: ../../../.julia/packages/Documenter/bYYzK/src/Utilities/Utilities.jl#L34
duplicate docs found for 'Base.read!' in src/man/api.md:20-23 ```@autodocs Modules = [XAM.SAM] public = false ```
[julia-buildpkg] Caching of the julia depot was not detected
Consider using `julia-actions/cache` to speed up runs https://github.com/julia-actions/cache. To ignore, set input `ignore-no-cache: true`