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Update exes to latest release: 1deg_jra55_iaf_bgc #123

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merged 3 commits into from
Jul 10, 2024
Merged

Update exes to latest release: 1deg_jra55_iaf_bgc #123

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a281f25
New CICE grid
anton-seaice Apr 17, 2024
bae0ba7
Updated CI in line with 0e6c9b61abeb51bbb6074af4ff8a66845d958bb9
CodeGat Jun 19, 2024
dcc2e79
Update to access-om2-bgc 2024.07.0
dougiesquire Jul 3, 2024
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25 changes: 0 additions & 25 deletions .github/workflows/call-pr-1-ci.yml
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19 changes: 0 additions & 19 deletions .github/workflows/call-pr-3-bump-tag.yml
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51 changes: 51 additions & 0 deletions .github/workflows/ci.yml
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Original file line number Diff line number Diff line change
@@ -0,0 +1,51 @@
name: CI
run-name: CI (${{ github.event_name }}) for ${{ github.ref_name }}
on:
pull_request:
branches:
- 'release-*'
- 'dev-*'
paths-ignore:
# These are ignored because they don't have anything to do with the model itself
- .github/**
- tools/**
- doc/**
- config/**
- .*
- README.md
push:
branches:
- 'release-*'
paths:
- 'metadata.yaml'
issue_comment:
types:
- created
- edited
jobs:
pr:
name: PR
if: github.event_name == 'pull_request'
uses: access-nri/model-config-tests/.github/workflows/config-pr-1-ci.yml@main
secrets: inherit
permissions:
contents: write
pull-requests: write # For pull request comments denoting failure of the workflow
checks: write

pr-comment:
name: Comment
if: github.event_name == 'issue_comment'
uses: access-nri/model-config-tests/.github/workflows/config-pr-2-confirm.yml@main
secrets: inherit
permissions:
contents: write # For updating metadata.yaml version and committing checksums
pull-requests: write # For commenting on PR

bump-tag:
name: Tag Bump
if: github.event_name == 'push'
uses: access-nri/model-config-tests/.github/workflows/config-pr-3-bump-tag.yml@main
secrets: inherit
permissions:
contents: write # For creating a new release
13 changes: 0 additions & 13 deletions .github/workflows/validate-json.yml
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12 changes: 6 additions & 6 deletions config.yaml
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Original file line number Diff line number Diff line change
Expand Up @@ -31,7 +31,7 @@ input:
submodels:
- name: atmosphere
model: yatm
exe: /g/data/vk83/apps/spack/0.20/release/linux-rocky8-x86_64/intel-19.0.5.281/libaccessom2-git.2023.10.26=2023.10.26-ltfg7jcn6t4cefotvj3kjnyu5nru26xo/bin/yatm.exe
exe: /g/data/vk83/apps/spack/0.22/release/linux-rocky8-x86_64/intel-19.0.5.281/libaccessom2-git.2023.10.26_2023.10.26-xarvbgn4yf4mxy5hxixm4gfbp7rbzsfh/bin/yatm.exe
input:
- /g/data/vk83/experiments/inputs/access-om2/remapping_weights/JRA55/global.1deg/2020.05.30/rmp_jrar_to_cict_CONSERV.nc
- /g/data/qv56/replicas/input4MIPs/CMIP6/OMIP/MRI/MRI-JRA55-do-1-4-0/atmos/3hr/rsds/gr/v20190429
Expand All @@ -49,7 +49,7 @@ submodels:

- name: ocean
model: mom
exe: /g/data/vk83/apps/spack/0.20/release/linux-rocky8-x86_64/intel-19.0.5.281/mom5-git.2023.11.09=2023.11.09-64l5azdtcoxhrgb5ynn2vued5lmjvn33/bin/fms_ACCESS-OM-BGC.x
exe: /g/data/vk83/apps/spack/0.22/release/linux-rocky8-x86_64/intel-19.0.5.281/mom5-git.2024.06.27_2024.06.27-q6bpwu526xql2gm6dbpnvf36yvnfxynj/bin/fms_ACCESS-OM-BGC.x
input:
- /g/data/vk83/experiments/inputs/access-om2/ocean/biogeochemistry/global.1deg/2022.02.24/bgc_param.nc
- /g/data/vk83/experiments/inputs/access-om2/ocean/biogeochemistry/global.1deg/2022.02.24/co2_iaf.nc
Expand All @@ -74,12 +74,12 @@ submodels:

- name: ice
model: cice5
exe: /g/data/vk83/apps/spack/0.20/release/linux-rocky8-x86_64/intel-19.0.5.281/cice5-git.2023.10.19=2023.10.19-v3zncpqjj2gyseudbwiudolcjq3k3leo/bin/cice_auscom_360x300_24x1_24p.exe
exe: /g/data/vk83/apps/spack/0.22/release/linux-rocky8-x86_64/intel-19.0.5.281/cice5-git.2023.10.19_2023.10.19-4tttbvaxg4afg3hjcrfaah6qngp43e5e/bin/cice_auscom_360x300_24x1_24p.exe
input:
- /g/data/vk83/experiments/inputs/access-om2/ice/grids/global.1deg/2024.04.17/grid.nc
- /g/data/vk83/experiments/inputs/access-om2/ice/grids/global.1deg/2024.04.17/kmt.nc
- /g/data/vk83/experiments/inputs/access-om2/ice/initial_conditions_biogeochemistry/global.1deg/2022.02.24/i2o.nc
- /g/data/vk83/experiments/inputs/access-om2/ice/initial_conditions_biogeochemistry/global.1deg/2022.02.24/o2i.nc
- /g/data/vk83/experiments/inputs/access-om2/ice/grids/global.1deg/2020.05.30/grid.nc
- /g/data/vk83/experiments/inputs/access-om2/ice/grids/global.1deg/2020.10.22/kmt.nc
- /g/data/vk83/experiments/inputs/access-om2/ice/initial_conditions/global.1deg/2020.05.30/u_star.nc
- /g/data/vk83/experiments/inputs/access-om2/ice/initial_conditions/global.1deg/2020.05.30/monthly_sstsss.nc
ncpus: 24
Expand All @@ -91,7 +91,7 @@ collate:
mem: 30GB
ncpus: 4
queue: normal
exe: /g/data/vk83/apps/spack/0.20/release/linux-rocky8-x86_64/intel-19.0.5.281/mom5-git.2023.11.09=2023.11.09-64l5azdtcoxhrgb5ynn2vued5lmjvn33/bin/mppnccombine.spack
exe: /g/data/vk83/apps/spack/0.22/release/linux-rocky8-x86_64/intel-19.0.5.281/mom5-git.2024.06.27_2024.06.27-q6bpwu526xql2gm6dbpnvf36yvnfxynj/bin/mppnccombine.spack

manifest:
reproduce:
Expand Down
18 changes: 9 additions & 9 deletions manifests/exe.yaml
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Expand Up @@ -2,17 +2,17 @@ format: yamanifest
version: 1.0
---
work/atmosphere/yatm.exe:
fullpath: /g/data/vk83/apps/spack/0.20/release/linux-rocky8-x86_64/intel-19.0.5.281/libaccessom2-git.2023.10.26=2023.10.26-ltfg7jcn6t4cefotvj3kjnyu5nru26xo/bin/yatm.exe
fullpath: /g/data/vk83/apps/spack/0.22/release/linux-rocky8-x86_64/intel-19.0.5.281/libaccessom2-git.2023.10.26_2023.10.26-xarvbgn4yf4mxy5hxixm4gfbp7rbzsfh/bin/yatm.exe
hashes:
binhash: 4e8b4ef76e971c4af3b26cfac632e160
md5: 5baa1d417fe6708fc30cbeaa57d82f96
binhash: 4f968e4cf41d6e51cf3cd59bd070e393
md5: eccfeb3f49d620b4e5f6b8c2bc5d8c36
work/ice/cice_auscom_360x300_24x1_24p.exe:
fullpath: /g/data/vk83/apps/spack/0.20/release/linux-rocky8-x86_64/intel-19.0.5.281/cice5-git.2023.10.19=2023.10.19-v3zncpqjj2gyseudbwiudolcjq3k3leo/bin/cice_auscom_360x300_24x1_24p.exe
fullpath: /g/data/vk83/apps/spack/0.22/release/linux-rocky8-x86_64/intel-19.0.5.281/cice5-git.2023.10.19_2023.10.19-4tttbvaxg4afg3hjcrfaah6qngp43e5e/bin/cice_auscom_360x300_24x1_24p.exe
hashes:
binhash: 3a65f67d21152e77034da28c22a94c66
md5: 37866455b057c85c3ea50c0ef0ea840b
binhash: 6d1d90c6ba37b4dbbd3173fab98d32d1
md5: 1ee0b63f488f38619cba0000586bc0c4
work/ocean/fms_ACCESS-OM-BGC.x:
fullpath: /g/data/vk83/apps/spack/0.20/release/linux-rocky8-x86_64/intel-19.0.5.281/mom5-git.2023.11.09=2023.11.09-64l5azdtcoxhrgb5ynn2vued5lmjvn33/bin/fms_ACCESS-OM-BGC.x
fullpath: /g/data/vk83/apps/spack/0.22/release/linux-rocky8-x86_64/intel-19.0.5.281/mom5-git.2024.06.27_2024.06.27-q6bpwu526xql2gm6dbpnvf36yvnfxynj/bin/fms_ACCESS-OM-BGC.x
hashes:
binhash: 45352e33876da49ca042014a9f6686e5
md5: a909552e85690be692ad3ec94016181b
binhash: efb3edca9d546723c29f92f7c8eb1856
md5: 1297c30c1b945e55fa08acdeb301b3d0
14 changes: 7 additions & 7 deletions manifests/input.yaml
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Expand Up @@ -3443,10 +3443,10 @@ work/atmosphere/INPUT/vas_input4MIPs_atmosphericState_OMIP_MRI-JRA55-do-1-4-0_gr
md5: b0e514bfac0d9dfbf538d36b8ecd17f9
work/ice/RESTART/grid.nc:
copy: true
fullpath: /g/data/vk83/experiments/inputs/access-om2/ice/grids/global.1deg/2020.05.30/grid.nc
fullpath: /g/data/vk83/experiments/inputs/access-om2/ice/grids/global.1deg/2024.04.17/grid.nc
hashes:
binhash: e7108317ae28b1f9ae77711728925cb6
md5: 1213e346055ee073fe33dc12578d99c6
binhash: 588f0b40bf750559434e425e7d039bca
md5: 7dd9ee5bce7f2eaeb75355684ddba599
work/ice/RESTART/i2o.nc:
copy: true
fullpath: /g/data/vk83/experiments/inputs/access-om2/ice/initial_conditions_biogeochemistry/global.1deg/2022.02.24/i2o.nc
Expand All @@ -3455,10 +3455,10 @@ work/ice/RESTART/i2o.nc:
md5: cc4cc9b60706470beddce59b600fef9f
work/ice/RESTART/kmt.nc:
copy: true
fullpath: /g/data/vk83/experiments/inputs/access-om2/ice/grids/global.1deg/2020.10.22/kmt.nc
fullpath: /g/data/vk83/experiments/inputs/access-om2/ice/grids/global.1deg/2024.04.17/kmt.nc
hashes:
binhash: 13a23d6d9331abc9d677c6fd466a4433
md5: 1f9806c646a620378e5257e480bc9df7
binhash: 2b659d429cbf9e12701709ff0185405f
md5: 9609d3db04f58cba200d7186dfe68ebd
work/ice/RESTART/monthly_sstsss.nc:
copy: true
fullpath: /g/data/vk83/experiments/inputs/access-om2/ice/initial_conditions/global.1deg/2020.05.30/monthly_sstsss.nc
Expand Down Expand Up @@ -3505,7 +3505,7 @@ work/ocean/INPUT/csiro_bgc.res.nc:
work/ocean/INPUT/csiro_bgc_sediment.res.nc:
fullpath: /g/data/vk83/experiments/inputs/access-om2/ocean/biogeochemistry/global.1deg/2022.02.24/csiro_bgc_sediment.res.nc
hashes:
binhash: 5dcf7a15477f488cd7d2f85a1d39a176
binhash: fff3375ad2ae36b7d0521dd67912a9fd
md5: 12488f7cf8f9c2f714c0ff2dbbb33a9b
work/ocean/INPUT/dust.nc:
fullpath: /g/data/vk83/experiments/inputs/access-om2/ocean/biogeochemistry/global.1deg/2022.02.24/dust.nc
Expand Down
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