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Translated proteome of zero bytes #56

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2021JohnSheng opened this issue Jun 3, 2024 · 0 comments
Open

Translated proteome of zero bytes #56

2021JohnSheng opened this issue Jun 3, 2024 · 0 comments

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@2021JohnSheng
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Hi!
I encountered an issue while running ISEScan on a Linux system installed via Conda. The command used for execution was as follows:
cat file_paths.txt | xargs -n 1 -P 32 -I{} isescan.py --seqfile {} --output results --nthread 2 --removeShortIS
During the execution, certain files in the provided file list trigger the following error message:
No such file or Empty file results/proteome/merged_bacteria_archaea_refseq_complete.fa.split/merged_bacteria_archaea_refseq_complete.part_4656.fa.faa
Despite this error, some files from the same list execute successfully without any issues.
Could you please provide a solution to this problem? Thanks.

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