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Request: update conda package to latest version #20

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famosab opened this issue May 16, 2024 · 6 comments
Open

Request: update conda package to latest version #20

famosab opened this issue May 16, 2024 · 6 comments

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@famosab
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famosab commented May 16, 2024

I would like to integrate MuSE in a pipeline and everything would be easier if it was available as conda package. I saw that the Version 1.0 was published to bioconda. Maybe you can also do it with Version 2!

@famosab
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famosab commented May 21, 2024

FYI: I will try and update the Package recipe: https://bioconda.github.io/recipes/muse/README.html If it works I'll close the issue :)

@famosab
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famosab commented May 21, 2024

@jiyunmaths
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@famosab Thank you for working on the conda package of MuSE 2. Please note MuSE 2 relies on more C/C++ libraries than MuSE 1 and it also has a more complicated building process than the old version.

@famosab
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famosab commented May 22, 2024

Thanks for the heads up. For now the Azure CI tests in bioconda are down but when they come back up we will see if it works as I thought. Else I'll come back to you!

@famosab
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famosab commented Jun 19, 2024

I just mentioned you in the PR. I am unsure how to continue and integrate the dependencies in the build.sh

@mencian
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mencian commented Nov 14, 2024

MuSE conda package has been updated to v2.1.2 here. I've disabled the build on osx as per the documentation.

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