-
Notifications
You must be signed in to change notification settings - Fork 130
/
genome-annotation.yaml.lock
321 lines (321 loc) · 6.14 KB
/
genome-annotation.yaml.lock
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
install_repository_dependencies: true
install_resolver_dependencies: true
install_tool_dependencies: false
tools:
- name: repeatexplorer_clustering
owner: gga
revisions:
- 6eec21828dd4
tool_panel_section_label: Annotation
- name: aegean_canongff3
owner: iuc
revisions:
- 3f438bf5475d
- c45c9dd066e2
tool_panel_section_label: Annotation
- name: apollo_fetch_jbrowse
owner: gga
revisions:
- d91f4bc313d3
tool_panel_section_label: Apollo
- name: apollo_feat_from_gff3
owner: gga
revisions:
- 250745643de2
tool_panel_section_label: Apollo
- name: apollo_export
owner: gga
revisions:
- f6e09a37bc8b
tool_panel_section_label: Apollo
- name: apollo_iframe
owner: gga
revisions:
- 29159d9ce6f0
- 300a6bebd790
- 3b6e8fd61dad
- 4a51a32cfecd
- 8585783deb07
- 860ca63f4a59
- c6172b538caf
- e1346ad005b3
- f4e3f9480307
tool_panel_section_label: Apollo
- name: apollo_create_or_update
owner: gga
revisions:
- 3d693b93991f
tool_panel_section_label: Apollo
- name: apollo_delete_organism
owner: gga
revisions:
- 8f4c1d40e893
tool_panel_section_label: Apollo
- name: apollo_create_account
owner: gga
revisions:
- 0929c15c3d70
- 115d5e5c88d4
- 1a2404ca43f9
- 3323060ba9a6
- 7e15490c2e58
- 8fadbd5cadff
- a46a509386d3
- d6f1caebd5a4
- e80d29fd2a33
tool_panel_section_label: Apollo
- name: apollo_list_organism
owner: gga
revisions:
- 06254eb0cb13
- 1cab73e6bf13
- 2c749ed310da
- 78abc724d792
- 8dc690130172
- a31493bc7952
- b31da15420e2
- bc2b80fc7e30
- f515aa0b0437
tool_panel_section_label: Apollo
- name: apollo_delete_features
owner: gga
revisions:
- f8d6315223d8
tool_panel_section_label: Apollo
- name: staramr
owner: nml
revisions:
- 141afacabcfa
- 2fd4d4c9c5c2
- 3548a93b39c1
- 3b22de20bd4b
- 4b9a8031ab74
- 4d83eccf5f81
- 5f43703968cf
- 930893c83a1a
- aeaa20b96ef2
- be818ae858e4
- da787fc8b740
tool_panel_section_label: Metagenomic Analysis
- name: busco
owner: iuc
revisions:
- 0d243f458b53
- 1440ae06552f
- 1e62c28ba91d
- 2a5b8b9936bf
- 2babe6d5c561
- 2dd755c1c6ff
- 4048d82f0c88
- 41030a6c03b7
- 46ae58b1d792
- 5ecdeca79a0d
- 602fb8e63aa7
- 94170eee0ad8
- bb935709506a
- cf13a1e03e5b
- e4bd1e99bacf
- e5c372c91e46
- e824f5d958d0
- ea8146ee148f
tool_panel_section_label: Annotation
- name: augustus
owner: bgruening
revisions:
- 09855551d713
- 0fc0f9cf035a
- 28433faa6e42
- bd0e53f3a891
- ca6d970d931c
- f5075dee9d6b
tool_panel_section_label: Annotation
- name: augustus_training
owner: bgruening
revisions:
- 1fbb1135da16
- 6519ebe25019
- 7be22100e5e1
- 86c89c3bd99d
- aada0deea587
- dc027fa56d55
- f1e653756174
tool_panel_section_label: Annotation
- name: fasta_stats
owner: simon-gladman
revisions:
- 20ca2574216a
tool_panel_section_label: Annotation
- name: maker
owner: iuc
revisions:
- 370c210d9541
- 3c1a01127868
- 5201ec38c01f
- 5e96efe6e6c6
- 73a79dec987b
- 7bac6f5fcfa2
- a444254e9a57
- d3a2072d8745
- d46d803ca6cc
tool_panel_section_label: Annotation
- name: maker_map_ids
owner: iuc
revisions:
- 1b3626164087
- 2e3535db1bfa
- 326f9c294b09
- 9e0cc465595e
- e408aa831db3
- e906fa778440
- f1912d5575df
tool_panel_section_label: Annotation
- name: aegean_locuspocus
owner: iuc
revisions:
- 1fdc517743e6
- c4ac24510b55
tool_panel_section_label: Annotation
- name: snap_training
owner: iuc
revisions:
- 2a598c0aa042
tool_panel_section_label: Annotation
- name: aegean_parseval
owner: iuc
revisions:
- 1b52f0c8ad7f
- d6c074a93c51
tool_panel_section_label: Annotation
- name: progressivemauve
owner: iuc
revisions:
- 4d869208bd52
- 97a43bcbf44d
- bdb752f3c6bb
- ce795616bd9c
tool_panel_section_label: Annotation
- name: bp_genbank2gff3
owner: iuc
revisions:
- 11c3eb512633
- a0d092f27fdf
tool_panel_section_label: Annotation
- name: blastxml_to_gapped_gff3
owner: iuc
revisions:
- 561e827baa5f
tool_panel_section_label: Annotation
- name: aegean_gaeval
owner: iuc
revisions:
- 1dd7adc21b6d
- 8dc7512c9dc9
tool_panel_section_label: Annotation
- name: gff_to_prot
owner: iuc
revisions:
- 07d7991bf205
- 2aea122fbd25
- 79261884facd
- b12ff7a3ee41
tool_panel_section_label: Annotation
- name: transit_gumbel
owner: iuc
revisions:
- 8fc50fe60127
- ecce0cbe659f
- f50807720df1
tool_panel_section_label: Annotation
- name: transit_hmm
owner: iuc
revisions:
- 532a84f0de1e
- 7db455b6434b
- a15f2773a7d7
tool_panel_section_label: Annotation
- name: transit_resampling
owner: iuc
revisions:
- 0e0618c96ca4
- 885459e1c83b
- ad4d42fabf32
tool_panel_section_label: Annotation
- name: transit_tn5gaps
owner: iuc
revisions:
- 3f5fc4b09496
- 4aaabd55eab8
- c68753eedf72
tool_panel_section_label: Annotation
- name: tbl2gff3
owner: iuc
revisions:
- 4a7f4b0cc0a3
tool_panel_section_label: Annotation
- name: helixer
owner: genouest
revisions:
- 1b08e39cc52d
- 7bc75dd0f782
- 7c1dc010a819
- c2fc4ac35199
- e3846dc36c4d
- ec1a90b97047
tool_panel_section_label: Annotation
- name: manta
owner: artbio
revisions:
- 555971edd46e
- cb5691381acb
tool_panel_section_label: Variant Calling
- name: braker3
owner: genouest
revisions:
- 3452c806c478
- 3c0865d1172f
- 5460380cc057
- 96ad8f880755
- bbe51a1c2b6b
- bd103884a09c
- c42bf6424ba4
- ea8c29a71a76
tool_panel_section_label: Annotation
- name: deepsig
owner: iuc
revisions:
- 8d9746627f77
tool_panel_section_label: Annotation
- name: genenotebook_genenotebook_build
owner: gga
revisions:
- 12494257f0f0
- 29eeddd8ea62
- 4398a6fea625
- a0358a5ab3ae
- bd94e502872a
- dfb2bc3aedbd
- e98f93ba54cd
tool_panel_section_label: Annotation
- name: omark
owner: iuc
revisions:
- 2eebe7f521f3
- 6f570ba54b41
- 9607b69326e1
- ce13b4c42256
tool_panel_section_label: Annotation
- name: data_manager_omamer
owner: iuc
revisions:
- 57db282ca204
- e1502e4f8725
- f8d72275878e
- name: compleasm
owner: iuc
revisions:
- 07a74537acd5
- 47f9f4d13d2c
- 79413aecc398
- 8f20a5b9b282
- cfec9601b25d
tool_panel_section_label: Annotation