Spatial profiling toolbox for spatial characterization of tumor immune microenvironment in multiplex images
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Updated
Jul 9, 2024 - Python
Spatial profiling toolbox for spatial characterization of tumor immune microenvironment in multiplex images
Plant phenotyping with image analysis
OHIF zero-footprint DICOM viewer and oncology specific Lesion Tracker, plus shared extension packages
Cell cortex segmentation and quantification in C. elegans PAR protein images
SimpleITK: a layer built on top of the Insight Toolkit (ITK), intended to simplify and facilitate ITK's use in rapid prototyping, education and interpreted languages.
a Stellar Dynamics Toolbox (Not Everybody Must Observe)
PixLab Resources & Code Samples
cuCIM - RAPIDS GPU-accelerated image processing library
Biological Data Science Summer School 20204. Materials for a practical course on live-cell imaging data analysis and creation of plugins for napari.
GPU-accelerated Image Processing library using OpenCL
Computational Pathology Toolbox developed by TIA Centre, University of Warwick.
GPU-accelerated Image Processing library
Exploratory code for PDF image mining
A versatile CLI and Python wrapper for Google's Gemini Pro large language models. Streamline the creation of chatbots, generate dynamic text, analyze images and transcribe audio with ease.
Tools for working with mps files
Tools for Plant Image Analysis
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Generate consensus 3D cells segmentations by combining 2D cell segmentations from any combination of xy, xz, yz views, compatible with outputs of any 2D segmentation method.
Insight Toolkit (ITK) -- Official Repository. ITK builds on a proven, spatially-oriented architecture for processing, segmentation, and registration of scientific images in two, three, or more dimensions.
Frontend application for seed classification of images acquired from digital microscopes
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