Incremental building of phylogenetic distance tree
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Updated
Jul 6, 2024 - C++
Incremental building of phylogenetic distance tree
Scripts and reference files relevant to the computational analysis of data generated by crosslink-ligation based experiments.
bioat, A python package & command line toolkit for Bioinformatics and data science!
BioFlask is an simple web interface for pairwise alignment.
The scramAligner pipeline is designer to align small RNA reads to references sequences with no mis-matches. There is no requirement for reference index building. The pipeline is ideally suited to analysis of siRNAs generated from transgenes or viruses. Scripts for visualising alignments are also provided
NEAT (NExt-generation Analysis Toolkit) simulates next-gen sequencing reads and can learn simulation parameters from real data.
A tool for automated alignment trimming in large-scale phylogenetic analyses. Development version: 2.0
general repo that holds all analysis and figures for the thymus spatial atlas by Yayon, Kedlian, Boehme, Radtke and many more!
This is a program written in c# for neat organization of FASTA files into one file to make multiple sequencing alignments easier.
Protein structure alignment and search algorithm
Bioinformatics package created in C# and python, which can analyze biological data such as DNA, RNA and protein sequences, Biological Databases Scrapping, As well as 'GEO Analysis' offers a variety of analysis on RNA-seq. Preprocessing, parsing various biological file formats (FASTA, PDB, SOFT, FASTQ, etc.), this all using C# language and dotnet.
Analyze your RNA sequencing data without writing a single line of code
A fast and accurate binning refinement tool to constructs high quality MAGs from the output of multiple binning tools.
Toolkit for analysis of ".hyb" format nucleotide sequence data from chimeric RNA experiments.
WebApp for DNA variants interpretation
High Throughput Sequencing at your fingertips
Nanopore long read assembly data pipeline for phage genomes
📹 Collection of my Youtube Tutorials over the years! Read, write, and share what you create ✨🎈
Illumina short read assembly data pipeline for phage
This repository wraps the pyliftover package to provide an option for lifting over common bioinformatics file types.
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