pg-tests.yml

name: Test PG
on: [push]

jobs:
  build:
    name: Frw-Tests (3.11 PG-SQL)
    runs-on: ubuntu-latest

    services:
      postgres:
        image: postgres:11
        env:
          POSTGRES_USER: postgres
          POSTGRES_PASSWORD: postgres
          POSTGRES_DB: tvb-test
        ports:
          - 5432:5432
        options: --health-cmd pg_isready --health-interval 10s --health-timeout 5s --health-retries 5

    steps:
      - uses: actions/checkout@v3
        with:
          fetch-depth: 0  # Shallow clones should be disabled for a better relevancy of analysis

      - name: set up Python
        uses: actions/setup-python@v4
        id: setPy
        with:
          python-version: "3.11"

      - name: put ~/.local/bin on $PATH
        run: echo "PATH=$HOME/.local/bin:$PATH" >> $GITHUB_ENV

#      - name: cache ~/.local for pip deps
#        id: cache-local
#        uses: actions/cache@v3
#        with:
#          path: ~/.local
#          key: pip--${{ hashFiles('tvb_build/docker/requirements_group') }}

      - name: install tools and dependencies
#        if: steps.cache-local.outputs.cache-hit != 'true'
        run: |
          sudo apt-get update
          sudo apt install libbz2-dev libhdf5-serial-dev liblzo2-dev
          python3 -m pip install --upgrade setuptools==59.8.0 pip wheel
          python3 -m pip install cryptography
          python3 -m pip install lockfile
          python3 -m pip install syncrypto
          python3 -m pip install -r tvb_build/docker/requirements_group
          pip3 install --user --no-build-isolation tvb-gdist

      - name: setup tvb
        run: cd tvb_build && bash install_full_tvb.sh

      - name: cache data
        id: cache-data
        uses: actions/cache@v3
        with:
          path: demo_data
          key: tvb-data-10128131

      - name: download data
        if: steps.cache-data.outputs.cache-hit != 'true'
        run: |
          wget -q https://zenodo.org/record/10128131/files/tvb_data.zip?download=1 -O tvb_data.zip
          mkdir demo_data
          unzip tvb_data.zip -d demo_data
          rm tvb_data.zip

      - name: setup data
        run: cd demo_data && python3 setup.py develop

      - name: run framework tests
        run: |
          cd tvb_framework
          pytest tvb/tests/framework --profile=TEST_POSTGRES_PROFILE