We read every piece of feedback, and take your input very seriously.
To see all available qualifiers, see our documentation.
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
The 5' and 3' markers on the fusion plot seems to be off. See the plot here.
The text was updated successfully, but these errors were encountered:
Possibly a Gviz bug. This code:
transcriptID <- "ENST00000395443" mart <- biomaRt::useMart( biomart = "ENSEMBL_MART_ENSEMBL", dataset = "hsapiens_gene_ensembl", host = "dec2013.archive.ensembl.org") # Create transcript track biomartTrack <- Gviz::BiomartGeneRegionTrack( filters = list( ensembl_transcript_id = transcriptID), biomart = mart) # Create axis track axisTrack <- Gviz::GenomeAxisTrack() displayPars(axisTrack) <- list( add53 = TRUE, labelPos = "below", cex = 1.5 ) Gviz::plotTracks( c(biomartTrack, axisTrack), chromosome = "chr3", add53 = TRUE, add35 = TRUE)
Produces this:
I've posted a question on the Bioconductor support site.
Sorry, something went wrong.
No branches or pull requests
The 5' and 3' markers on the fusion plot seems to be off. See the plot here.
The text was updated successfully, but these errors were encountered: