Matplotlib figures are not shown on the compiled documentation. #788
Comments
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Thanks for the report, can you please provide a minimal reproducible example? I don't have any experience with the |
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I have created #794 to test this, and it seems to work. What is different in your case? |
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Hi @mgeier - I'm facing the same issue. I have attached a zip file with Notes:
The minimal test environment was created using mambaforge with just Here's the full list of the environment (here on a mac) |
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A followup: after a few more tests, there is an option "save widget state automatically" in jupyter-lab:
Once this is activated this seems to change something in the saved processed notebook, and the rendering is then correct using both Maybe @Vital-Fernandez can confirm if this also solves the issue for him. |
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Yes, the widget state needs to be available for the widget to be shown in the HTML page. Do you want to add this to the documentation, maybe at https://nbsphinx.readthedocs.io/en/0.9.4/code-cells.html#Troubleshooting?
I'm still wondering why |
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I think it would be useful to document this - it took me a little while to find this 'widget state' option. Not sure when this was introduced. I could not see the difference between the notebook saved with and without. As to how |
Can you please make a PR? |
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Hi I have been using nbsphinx for a couple of years for my library to compile the tutorials from notebooks.
I had to reinstall python and now the figures are not longer showed on the sphinx documentation (they show fine on the jupyter notebooks with
%matplotlib widget).If I run the command:
python -c "import sys; print('\n',sys.version); import ipympl; print('ipympl version:', ipympl.__version__)" && jupyter --version && jupyter nbextension list && jupyter labextension listI get
ipympl version: 0.9.3
Selected Jupyter core packages...
IPython : 8.23.0
ipykernel : 6.29.4
ipywidgets : 8.1.2
jupyter_client : 8.6.1
jupyter_core : 5.7.2
jupyter_server : 2.13.0
jupyterlab : 4.1.6
nbclient : 0.10.0
nbconvert : 7.16.3
nbformat : 5.10.4
notebook : 7.1.2
qtconsole : 5.5.1
traitlets : 5.14.2
Known nbextensions:
config dir: /home/vital/anaconda3/etc/jupyter/nbconfig
notebook section
jupyter-matplotlib/extension enabled
- Validating: OK
nbextensions_configurator/config_menu/main enabled
- Validating: problems found:
- require? X nbextensions_configurator/config_menu/main
jupyterlab-plotly/extension enabled
- Validating: OK
pydeck/extension enabled
- Validating: problems found:
- require? X pydeck/extension
jupyter-js-widgets/extension enabled
- Validating: OK
contrib_nbextensions_help_item/main enabled
- Validating: OK
tree section
nbextensions_configurator/tree_tab/main enabled
- Validating: problems found:
- require? X nbextensions_configurator/tree_tab/main
JupyterLab v4.1.6
/home/vital/PycharmProjects/lime/venv/share/jupyter/labextensions
jupyter-matplotlib v0.11.3 enabled OK
jupyterlab_pygments v0.3.0 enabled OK (python, jupyterlab_pygments)
@jupyter-widgets/jupyterlab-manager v5.0.10 enabled OK (python, jupyterlab_widgets)
@jupyter-notebook/lab-extension v7.1.2 enabled OK
I am using ubuntu 22.04.04 with python 3.11 and these are some of the packages I have installed:
docutils 0.20.1
ipympl 0.9.3
ipython 8.23.0
jupyter 1.0.0
jupyter_client 8.6.1
jupyter-console 6.6.3
jupyter-contrib-core 0.4.2
jupyter-contrib-nbextensions 0.7.0
jupyter_core 5.7.2
jupyter-events 0.10.0
jupyter-highlight-selected-word 0.2.0
jupyter-lsp 2.2.5
jupyter-nbextensions-configurator 0.6.3
jupyter_server 2.13.0
jupyter_server_terminals 0.5.3
jupyterlab 4.1.6
jupyterlab_pygments 0.3.0
jupyterlab_server 2.26.0
jupyterlab_widgets 3.0.10
matplotlib 3.7.2
matplotlib-inline 0.1.6
mplcursors 0.5.2
nbclient 0.10.0
nbconvert 7.16.3
nbformat 5.10.4
nbsphinx 0.9.2
notebook 7.1.2
notebook_shim 0.2.4
numpy 1.24.4
pip 24.0
scipy 1.10.1
Sphinx 7.2.6
sphinx-rtd-theme 2.0.0
sphinxcontrib-applehelp 1.0.8
sphinxcontrib-devhelp 1.0.6
sphinxcontrib-htmlhelp 2.0.5
sphinxcontrib-jquery 4.1
sphinxcontrib-jsmath 1.0.1
sphinxcontrib-qthelp 1.0.7
sphinxcontrib-serializinghtml 1.1.10
Thank you very much for any advice.
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