forked from rwth-i6/returnn
-
Notifications
You must be signed in to change notification settings - Fork 0
/
TFNetworkLayer.py
2550 lines (2305 loc) · 98.5 KB
/
TFNetworkLayer.py
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
497
498
499
500
501
502
503
504
505
506
507
508
509
510
511
512
513
514
515
516
517
518
519
520
521
522
523
524
525
526
527
528
529
530
531
532
533
534
535
536
537
538
539
540
541
542
543
544
545
546
547
548
549
550
551
552
553
554
555
556
557
558
559
560
561
562
563
564
565
566
567
568
569
570
571
572
573
574
575
576
577
578
579
580
581
582
583
584
585
586
587
588
589
590
591
592
593
594
595
596
597
598
599
600
601
602
603
604
605
606
607
608
609
610
611
612
613
614
615
616
617
618
619
620
621
622
623
624
625
626
627
628
629
630
631
632
633
634
635
636
637
638
639
640
641
642
643
644
645
646
647
648
649
650
651
652
653
654
655
656
657
658
659
660
661
662
663
664
665
666
667
668
669
670
671
672
673
674
675
676
677
678
679
680
681
682
683
684
685
686
687
688
689
690
691
692
693
694
695
696
697
698
699
700
701
702
703
704
705
706
707
708
709
710
711
712
713
714
715
716
717
718
719
720
721
722
723
724
725
726
727
728
729
730
731
732
733
734
735
736
737
738
739
740
741
742
743
744
745
746
747
748
749
750
751
752
753
754
755
756
757
758
759
760
761
762
763
764
765
766
767
768
769
770
771
772
773
774
775
776
777
778
779
780
781
782
783
784
785
786
787
788
789
790
791
792
793
794
795
796
797
798
799
800
801
802
803
804
805
806
807
808
809
810
811
812
813
814
815
816
817
818
819
820
821
822
823
824
825
826
827
828
829
830
831
832
833
834
835
836
837
838
839
840
841
842
843
844
845
846
847
848
849
850
851
852
853
854
855
856
857
858
859
860
861
862
863
864
865
866
867
868
869
870
871
872
873
874
875
876
877
878
879
880
881
882
883
884
885
886
887
888
889
890
891
892
893
894
895
896
897
898
899
900
901
902
903
904
905
906
907
908
909
910
911
912
913
914
915
916
917
918
919
920
921
922
923
924
925
926
927
928
929
930
931
932
933
934
935
936
937
938
939
940
941
942
943
944
945
946
947
948
949
950
951
952
953
954
955
956
957
958
959
960
961
962
963
964
965
966
967
968
969
970
971
972
973
974
975
976
977
978
979
980
981
982
983
984
985
986
987
988
989
990
991
992
993
994
995
996
997
998
999
1000
from __future__ import print_function
import tensorflow as tf
import TFUtil
from TFUtil import Data, OutputWithActivation, reuse_name_scope, var_creation_scope, dimshuffle, swapaxes
class LayerBase(object):
"""
This is the base class for all layers.
Every layer by default has a list of source layers `sources` and defines `self.output` which is of type Data.
It shares some common functionality across all layers, such as explicitly defining the output format,
some parameter regularization, and more.
"""
layer_class = None # type: str|None # for get_layer_class()
recurrent = False # if the order in the time-dimension is relevant
def __init__(self, name, network, output=None, n_out=None, out_type=None, sources=(),
target=None, loss=None, size_target=None,
L2=None, is_output_layer=None,
batch_norm=False,
spatial_smoothing=0.0,
initial_output=None,
rec_previous_layer=None,
trainable=True):
"""
:param str name:
:param TFNetwork.TFNetwork network:
:param Data output:
:param None|int n_out: output dim
:param dict[str] out_type: kwargs for Data class. more explicit than n_out.
:param list[LayerBase] sources: via self.transform_config_dict()
:param str|None target: if some loss is set, this is the target data-key, i.e. network.extern_data.get_data(target)
alternatively, this also can be a layer name.
:param str|None size_target: like target but this is only used to set our output size in case of training
:param Loss|None loss: via self.transform_config_dict()
:param float|None L2: for constraints
:param bool|None is_output_layer:
:param bool|dict batch_norm: see self.batch_norm()
:param str|float initial_output: used for recurrent layer, see self.get_rec_initial_output()
:param LayerBase|None rec_previous_layer: via the recurrent layer, layer (template) which represents the past of us
:param bool trainable: whether the parameters of this layer will be trained
"""
self.name = name
self.network = network
if loss and not target:
target = self.network.extern_data.default_target
self.target = target
self.loss = loss
if self.loss and self.loss.recurrent:
self.recurrent = True
if output:
self.output = output
if n_out:
assert self.output.dim == n_out
if out_type:
if "shape" in out_type:
assert self.output.shape == out_type["shape"]
if "dim" in out_type:
assert self.output.dim == out_type["dim"]
else:
self.output = self.get_out_data_from_opts(
out_type=out_type, n_out=n_out,
network=network, name=name, target=target, size_target=size_target,
sources=sources, loss=loss)
self.output_before_activation = None # type: None|OutputWithActivation
self.rec_vars_outputs = {} # type: dict[str,tf.Tensor]
self.search_choices = None # type: SearchChoices
self._initial_output = initial_output
self._rec_previous_layer = rec_previous_layer
self.sources = sources
self.params = {} # type: dict[str,tf.Variable]
self.L2 = L2
self._is_output_layer = is_output_layer
self.use_batch_norm = batch_norm
self.spatial_smoothing = spatial_smoothing
self.trainable = trainable
# Stats will be collected by the engine.
self.stats = {} # type: dict[str,tf.Tensor]
def post_init(self):
"""
This gets called right after self.__init__().
"""
if self.use_batch_norm:
opts = {}
if isinstance(self.use_batch_norm, dict):
opts = self.use_batch_norm
self.output.placeholder = self.batch_norm(self.output, **opts)
def __repr__(self):
return "<%s %r out_type=%s>" % (
self.__class__.__name__, self.name, self.output.get_description(with_name=False) if self.output else None)
@classmethod
def get_out_data_from_opts(cls, **kwargs):
"""
Gets a Data template (i.e. shape etc is set but not the placeholder) for our __init__ args.
The purpose of having this as a separate classmethod is to be able to infer the shape information
without having to construct the layer.
This function should not create any nodes in the computation graph.
:param kwargs: all the same kwargs as for self.__init__()
:return: Data template (placeholder not set)
:rtype: Data
"""
return cls._base_get_out_data_from_opts(**kwargs)
@classmethod
def _base_get_out_data_from_opts(cls, network, name, out_type=None, n_out=None, target=None, size_target=None,
sources=(), loss=None,
**kwargs):
"""
Called via BaseLayer.get_out_data_from_opts().
:param TFNetwork.TFNetwork network:
:param str name:
:param dict[str]|None out_type:
:param int|None n_out:
:param str|None target:
:param str|None size_target:
:param list[LayerBase] sources:
:param Loss|None loss:
:param kwargs: remaining kwargs of self.__init__(), ignored here
:return: Data template (placeholder not set)
:rtype: Data
"""
if loss and not target:
target = network.extern_data.default_target
if n_out is None and target:
n_out = cls._static_get_target_value(target=target, network=network, mark_data_key_as_used=False).dim
if loss:
n_out = loss.get_auto_output_layer_dim(n_out)
if out_type is None:
assert n_out
out_type = {"dim": n_out}
out_type = out_type.copy()
out_type.setdefault("name", "%s_output" % name)
if sources and not sources[0].output.sparse and not out_type.get("sparse", False):
out_type.setdefault("dtype", sources[0].output.dtype)
if n_out is not None:
out_type.setdefault("dim", n_out)
assert out_type["dim"] == n_out
if sources:
if out_type.get("sparse", False):
out_type.setdefault("shape", sources[0].output.shape_dense[:-1])
else:
out_type.setdefault("shape", sources[0].output.shape_dense[:-1] + (out_type.get("dim"),))
# You are supposed to set self.output.{batch_dim_axis,time_dim_axis} explicitly,
# as well as check the inputs if they are as you would suggest.
# However, a good default is often to use the same as the input.
if sources and "batch_dim_axis" not in out_type:
out_type.setdefault("batch_dim_axis", sources[0].output.batch_dim_axis)
out_type.setdefault("time_dim_axis", sources[0].output.time_dim_axis)
beam_size = None
for src in sources:
beam_size = beam_size or src.output.beam_size
out_type.setdefault("beam_size", beam_size)
output = Data(**out_type)
cls._post_init_output(
output=output, network=network, target=target, size_target=size_target, sources=sources, **kwargs)
return output
@classmethod
def _post_init_output(cls, output, network, target=None, size_target=None, sources=(), **kwargs):
"""
:param Data output:
:param TFNetwork.TFNetwork network:
:param str|None target:
:param str|None size_target:
:param list[LayerBase] sources:
"""
# You are supposed to set self.output.placeholder to the value which you want to return by the layer.
# Normally you are also supposed to set self.output.size_placeholder explicitly, just like self.output.placeholder.
# However, in many cases, this will just be {0: time-lengths} and the same as from the input.
# We check for this case and preset it by that if possible.
# If you want to have it different in your layer, just overwrite it.
if sources and sources[0].output.matches_var_dim_pattern(output):
output.size_placeholder = sources[0].output.size_placeholder.copy()
elif target or size_target:
if network.train_flag is not False:
# TODO: In training, this is ok. Maybe as well as for eval but not clear.
# In forward, mark_data_key_as_used=False should be used and anyway that target value is not available.
output.size_placeholder = cls._static_get_target_value(
target=target or size_target, network=network,
mark_data_key_as_used=network.train_flag is not False).size_placeholder.copy()
if any([(not src.output.available_for_inference) for src in sources]):
output.available_for_inference = False
@classmethod
def cls_get_tf_scope_name(cls, name):
"""
:param str name: layer name
:return: scope name, might be just name
"""
return name.replace(":", "__")
@classmethod
def transform_config_dict(cls, d, network, get_layer):
"""
:param dict[str] d: will modify inplace
:param TFNetwork.TFNetwork network:
:param ((str) -> LayerBase) get_layer: function to get or construct another layer
Will modify `d` such that it becomes the kwargs for `self.__init__()`.
Mostly leaves `d` as-is.
This is used by TFNetwork.construct_from_dict().
"""
src_names = d.pop("from", ["data"])
if not isinstance(src_names, (list, tuple)):
src_names = [src_names]
d["sources"] = [
get_layer(src_name)
for src_name in src_names
if not src_name == "none"]
if d.get("loss"):
loss_class = get_loss_class(d["loss"])
loss = loss_class(**d.pop("loss_opts", {}))
assert isinstance(loss, Loss)
d["loss"] = loss
if d.get("target"):
# Not resolving this in the dict, but call get_layer to make it available.
assert isinstance(d["target"], str)
if d["target"].startswith("layer:"):
get_layer(d["target"][len("layer:"):])
@property
def tf_scope_name(self):
return self.cls_get_tf_scope_name(name=self.name)
def is_output_layer(self):
"""
Some code differs between an output layer and other layers.
It is a bit arbitrary what we define as output layer.
:rtype: bool
"""
if self._is_output_layer is not None:
return self._is_output_layer
if self.target:
return True
if self.name == "output":
return True
return False
def get_dep_layers(self):
"""
:return: list of layers this layer depends on.
normally this is just self.sources but e.g. the attention layer in addition has a base, etc.
:rtype: list[LayerBase]
"""
return list(self.sources)
def get_search_beam_size(self):
"""
:return: beam size if there was a choice layer and we do search
:rtype: int|None
"""
if self.network.search_flag:
choices = self.network.get_search_choices(src=self)
if choices:
return choices.search_choices.beam_size
return None
def get_batch_dim(self):
"""
The batch dim by this layer, not taken from our output but calculated.
Normally it is self.network.get_batch_dim()
but if we do search and there was a choice layer, it it multiplied by the beam size.
:return: batch dim * beam size
:rtype: tf.Tensor
"""
batch_dim = self.network.get_batch_dim()
beam_size = self.get_search_beam_size()
if beam_size is not None:
batch_dim *= beam_size
return batch_dim
def add_param(self, param):
"""
:param tf.Variable param:
:return: param
:rtype tf.Variable
"""
assert param.name
self.params[param.name] = param
return param
def set_param_values_by_dict(self, values_dict, session):
"""
:param dict[str,numpy.ndarray] values_dict:
:param tf.Session session:
"""
for param_name, values in values_dict.items():
param = self.params[param_name]
assert isinstance(param, tf.Variable)
shape = param.get_shape()
assert isinstance(shape, tf.TensorShape)
assert shape.is_fully_defined()
assert tuple(shape.as_list()) == values.shape
self.network.get_var_assigner(param).assign(values, session=session)
def get_param_values_dict(self, session):
"""
:param tf.Session session:
:return: dict name -> values
:rtype: dict[str,numpy.ndarray]
"""
d = {}
for param_name, param in self.params.items():
d[param_name] = param.eval(session)
return d
@staticmethod
def _static_get_target_value(target, network, mark_data_key_as_used=True):
"""
:param str target:
:param TFNetwork.TFNetwork network:
:param bool mark_data_key_as_used: forwarded self.network.get_extern_data()
:rtype: Data | None
"""
if not target or target == "none":
return None
if target.startswith("layer:"):
return network.layers[target[len("layer:"):]].output
assert network.extern_data.has_data(target), "target %r unknown" % target
return network.get_extern_data(target, mark_data_key_as_used=mark_data_key_as_used)
def _get_target_value(self, mark_data_key_as_used=True):
"""
:param bool mark_data_key_as_used: forwarded self.network.get_extern_data()
:rtype: Data | None
"""
return self._static_get_target_value(
target=self.target, network=self.network, mark_data_key_as_used=mark_data_key_as_used)
def _init_loss(self):
if self.loss.output is self.output:
return
self.loss.init(
output=self.output,
output_with_activation=self.output_before_activation,
target=self._get_target_value())
def get_loss_value(self):
"""
:return: the loss, a scalar value, or None if not set
:rtype: tf.Tensor | None
"""
if not self.loss:
return None
self._init_loss()
with tf.name_scope("loss"):
return self.loss.get_value()
def get_error_value(self):
"""
:return: usually the frame error rate, or None if not defined
:rtype: tf.Tensor | None
"""
if not self.loss:
return None
self._init_loss()
with tf.name_scope("error"):
return self.loss.get_error()
def get_loss_normalization_factor(self):
if not self.loss:
return None
self._init_loss()
return self.loss.get_normalization_factor()
def get_params_l2_norm(self):
return 2 * sum([tf.nn.l2_loss(param) for (name, param) in sorted(self.params.items())])
def get_output_spatial_smoothing_energy(self):
from TFUtil import spatial_smoothing_energy, flatten_with_seq_len_mask
energy = spatial_smoothing_energy(self.output.placeholder, dim=self.output.dim) # (batch,time)
assert self.output.have_tim_axis()
energy = flatten_with_seq_len_mask(
energy,
seq_lens=self.output.size_placeholder[self.output.time_dim_axis_excluding_batch],
time_major=self.output.is_time_major) # (time')
energy = tf.reduce_sum(energy)
return energy
def get_constraints_value(self):
c = 0
if self.L2:
c += self.L2 * self.get_params_l2_norm()
if self.spatial_smoothing:
c += self.spatial_smoothing * self.get_output_spatial_smoothing_energy()
if c is 0:
return None
return c
def batch_norm(self, data,
use_shift=True, use_std=True, use_sample=0.0, force_sample=False,
momentum=0.99, epsilon=1e-3,
sample_mean=None, sample_variance=None,
gamma=None, beta=None):
"""
:param Data data:
:param bool use_shift:
:param bool use_std:
:param float use_sample: defaults to 0.0 which is used in training
:param bool force_sample: even in eval, use the use_sample factor
:param float momentum: for the running average of sample_mean and sample_std
:param float epsilon:
:param tf.Tensor sample_mean:
:param tf.Tensor sample_variance:
:param tf.Tensor gamma:
:param tf.Tensor beta:
:rtype: tf.Tensor
http://arxiv.org/abs/1502.03167
Also see:
tf.nn.batch_normalization()
https://github.com/deepmind/sonnet/blob/master/sonnet/python/modules/batch_norm.py
"""
with tf.name_scope("batch_norm"):
x = data.get_placeholder_flattened(keep_dims=True) # shape (time',...)
mean, variance = tf.nn.moments(x, axes=[0], keep_dims=True)
if sample_mean is None:
with var_creation_scope():
sample_mean = self.add_param(tf.Variable(
initial_value=tf.zeros(data.non_dynamic_batch_shape),
name="%s_%s_mean" % (self.name, data.name),
trainable=False))
# Use exponential moving average of batch mean.
# Note: We could also use cumulative moving average. Our Theano implementation does that for inference.
sample_mean = tf.assign_add(sample_mean, (mean - sample_mean) * momentum)
if sample_variance is None:
# Note: Our Theano implementation does not use a moving average for this.
with var_creation_scope():
sample_variance = self.add_param(tf.Variable(
initial_value=tf.ones(data.non_dynamic_batch_shape),
name="%s_%s_variance" % (self.name, data.name),
trainable=False))
sample_variance = tf.assign_add(sample_variance, (variance - sample_variance) * momentum)
# If train or if force_sample, use default use_sample=0.0, otherwise use_sample=1.0.
use_sample = 1.0 + tf.cast(tf.logical_or(self.network.train_flag, force_sample), tf.float32) * (use_sample - 1.0)
mean = (1. - use_sample) * mean + use_sample * sample_mean
variance = (1. - use_sample) * variance + use_sample * sample_variance
bn = (data.placeholder - mean) * tf.rsqrt(variance + epsilon)
if use_std:
if gamma is None:
with var_creation_scope():
gamma = self.add_param(tf.Variable(
initial_value=tf.ones(data.non_dynamic_batch_shape),
name="%s_%s_gamma" % (self.name, data.name),
trainable=True))
bn *= gamma
if use_shift:
if beta is None:
with var_creation_scope():
beta = self.add_param(tf.Variable(
initial_value=tf.zeros(data.non_dynamic_batch_shape),
name="%s_%s_beta" % (self.name, data.name),
trainable=True))
bn += beta
return bn
def get_hidden_state(self):
"""
If this is a recurrent layer, this would return the hidden state.
This is used e.g. for the RnnCellLayer class.
:rtype: tf.Tensor | list[tf.Tensor] | None
:return: optional tensor(s) with shape (time, batch, dim)
"""
return None
def get_last_hidden_state(self):
"""
If this is a recurrent layer, this would return the last hidden state.
If not, as a fallback, we recursively check our sources.
:rtype: tf.Tensor | None
:return: optional tensor with shape (batch, dim)
"""
# This is the generic fallback code.
hidden_states = []
for s in self.sources:
h = s.get_last_hidden_state()
if h is not None:
assert h.get_shape().ndims == 2
hidden_states += [h]
if not hidden_states:
return None
if len(hidden_states) == 1:
return hidden_states[0]
return tf.concat(hidden_states, axis=1, name="concat_hidden_states")
@classmethod
def get_rec_initial_output(cls, batch_dim, name, output, initial_output=None, **kwargs):
v = initial_output
data = output
if isinstance(v, tf.Tensor):
return v
if v is None and data.sparse:
raise Exception(
("You must explicitly provide an initial output value for sparse data %r." % data) +
(" E.g. '%s': {'initial_output': 'zeros'}." % name))
if v is None:
v = "zeros"
assert all([d is not None for d in data.shape])
shape = [batch_dim] + list(data.shape)
if isinstance(v, (float, int)):
with tf.name_scope("init_%s_const" % name):
from TFUtil import constant_with_shape
return tf.cast(constant_with_shape(v, shape=shape), dtype=data.dtype)
assert isinstance(v, str)
if v == "zeros":
return tf.zeros(shape, dtype=data.dtype, name="init_%s_zeros" % name)
elif v == "ones":
return tf.ones(shape, dtype=data.dtype, name="init_%s_ones" % name)
else:
raise Exception("invalid initial output type %r for sub-layer %r" % (v, name))
@classmethod
def get_rec_initial_extra_outputs(cls, batch_dim, **kwargs):
return {}
class SearchChoices(object):
def __init__(self, owner, src_beams=None, beam_size=None, is_decided=False):
"""
:param LayerBase owner:
:param tf.Tensor|None src_beams: (batch, beam) -> src beam index
:param int|None beam_size:
:param bool is_decided: by decide layer
"""
self.owner = owner
self._done_src_layer = False
self._src_layer = None # type: LayerBase
self.src_beams = src_beams
self.beam_size = beam_size
self.beam_scores = None # type: tf.Tensor
self.is_decided = is_decided
def __repr__(self):
s = " beam_size=%r" % self.beam_size
if self._done_src_layer:
s += " src_layer=%r" % self._src_layer
s += " beam_scores=%r" % self.beam_scores
if self.is_decided:
s += " is_decided"
return "<SearchChoices owner=%r%s>" % (self.owner, s)
@property
def src_layer(self):
"""
:rtype: LayerBase
"""
if not self._done_src_layer:
self._src_layer = self.owner.network.get_search_choices(sources=self.owner.sources)
self._done_src_layer = True
return self._src_layer
def set_beam_scores_from_own_rec(self):
self.set_beam_scores_from_rec(self.owner.rec_vars_outputs)
def set_beam_scores_from_rec(self, rev_vars_outputs):
"""
:param dict[str,tf.Tensor] rev_vars_outputs:
"""
assert rev_vars_outputs.get("choice_scores", None) is not None
self.beam_scores = rev_vars_outputs["choice_scores"] # (batch, beam)
if self.src_beams is not None:
self.beam_scores.set_shape(self.src_beams.get_shape())
def set_beam_scores(self, scores):
"""
:param tf.Tensor scores: (batch, beam) -> log score
"""
self.beam_scores = scores
self.owner.rec_vars_outputs["choice_scores"] = scores
def filter_seqs(self, seq_filter):
"""
:param tf.Tensor seq_filter: (batch, beam) of type bool
"""
with tf.name_scope("search_filter_seqs"):
from TFUtil import expand_dims_unbroadcast, get_shape_dim
beam_size = get_shape_dim(self.beam_scores, axis=-1)
src_layer = self.src_layer
src_search = src_layer.search_choices
self.beam_scores = tf.where(seq_filter, self.beam_scores, src_search.beam_scores)
initial_src_beams = tf.range(0, beam_size, dtype=self.src_beams.dtype) # (beam,)
initial_src_beams = expand_dims_unbroadcast(
initial_src_beams, axis=0, dim=get_shape_dim(self.beam_scores, axis=0)) # (batch, beam)
self.src_beams = tf.where(seq_filter, self.src_beams, initial_src_beams)
class SourceLayer(LayerBase):
layer_class = "source"
def __init__(self, network, data_key=None, sources=(), **kwargs):
"""
:param TFNetwork.TFNetwork network:
:param str|None data_key:
:param tuple sources:
"""
if data_key is None:
data_key = network.extern_data.default_input
assert not sources, "source layer does not expect sources"
data = network.get_extern_data(data_key, mark_data_key_as_used=True)
super(SourceLayer, self).__init__(network=network, **kwargs)
self.output = data
@classmethod
def get_out_data_from_opts(cls, network, data_key=None, **kwargs):
if data_key is None:
data_key = network.extern_data.default_input
return network.get_extern_data(data_key, mark_data_key_as_used=False)
def concat_sources(src_layers):
"""
:param list[LayerBase] src_layers:
:return: data with placeholders set
:rtype: Data
"""
assert src_layers, "need source layers"
if len(src_layers) == 1:
return src_layers[0].output
network = src_layers[0].network
if (tuple(src_layers), 0.0) in network.concat_sources_dropout_cache:
return network.concat_sources_dropout_cache[(tuple(src_layers), 0.0)].copy()
data = get_concat_sources_data_template(src_layers)
prefix_shape = data.shape[:-1] # without batch-dim
for layer in src_layers:
assert not layer.output.sparse, "sparse concat not supported"
assert layer.output.dtype == data.dtype, "incompatible dtype with layer %r" % layer
assert layer.output.time_dim_axis_excluding_batch == data.time_dim_axis_excluding_batch
shape = layer.output.shape
assert layer.output.placeholder.get_shape().ndims == len(shape) + 1 # with batch-dim
assert shape, "source must not be a scalar of layer %r" % layer
assert shape[:-1] == prefix_shape, "incompatible concat with layer %r" % layer
assert shape[-1], "source last-dim must be specified of layer %r" % layer
data.placeholder = tf.concat(
axis=len(prefix_shape) + 1, # one more because this is with batch-dim
values=[layer.output.get_placeholder_with_specific_batch_dim_axis(data.batch_dim_axis) for layer in src_layers])
data.size_placeholder = src_layers[0].output.size_placeholder.copy()
network.concat_sources_dropout_cache[(tuple(src_layers), 0.0)] = data.copy()
return data
def get_concat_sources_data_template(src_layers):
"""
:param list[LayerBase] src_layers:
:return: data with no placeholders set
:rtype: Data
"""
assert src_layers, "need source layers"
dim = 0
beam_size = None
for layer in src_layers:
shape = layer.output.shape
assert shape[-1], "source last-dim must be specified of layer %r" % layer
dim += shape[-1]
beam_size = beam_size or layer.output.beam_size
data = Data(
name="concat_sources",
shape=src_layers[0].output.shape[:-1] + (dim,),
dim=dim,
sparse=False,
batch_dim_axis=src_layers[0].output.batch_dim_axis,
time_dim_axis=src_layers[0].output.time_dim_axis,
dtype=src_layers[0].output.dtype,
beam_size=beam_size)
return data
def concat_sources_with_opt_dropout(src_layers, dropout=0):
"""
:param list[LayerBase] src_layers:
:param float dropout: will be applied if train_flag is set
:return: data with placeholders set
:rtype: Data
"""
assert src_layers, "need source layers"
data = concat_sources(src_layers)
network = src_layers[0].network
if network.train_flag is False:
# If we know that we are not training, we always disable dropout.
dropout = 0
if not dropout:
return data
if (tuple(src_layers), float(dropout)) in network.concat_sources_dropout_cache:
return network.concat_sources_dropout_cache[(tuple(src_layers), float(dropout))].copy()
data = data.copy()
assert 0.0 < dropout < 1.0
fn_train = lambda: tf.nn.dropout(
data.placeholder,
keep_prob=1 - dropout,
# noise_shape is like old behavior for now:
# all dynamic dimensions (batch,time) will use the same dropout-mask broadcasted.
noise_shape=data.non_dynamic_batch_shape,
seed=network.random.randint(2 ** 31))
fn_eval = lambda: data.placeholder
data.placeholder = network.cond_on_train(fn_train, fn_eval)
network.concat_sources_dropout_cache[(tuple(src_layers), float(dropout))] = data.copy()
return data
class _ConcatInputLayer(LayerBase):
"""
Base layer which concatenates all incoming source layers in the feature dimension,
and provides that as `self.input_data`.
This is the most common thing what many layers do with the input sources.
If there is only a single source, will not do anything.
This layer also optionally can do dropout on the input.
"""
def __init__(self, dropout=0, mask=None, **kwargs):
"""
:param float dropout: 0.0 means to apply no dropout. dropout will only be applied during training
:param str|None mask: "dropout" or "unity" or None. this is obsolete and only here for historical reasons
"""
super(_ConcatInputLayer, self).__init__(**kwargs)
assert mask in ['dropout', 'unity', None], "invalid mask: %r" % mask
if mask == "unity":
assert not dropout
elif mask == "dropout":
assert dropout > 0
self.input_data = None
if self.sources:
self.input_data = concat_sources_with_opt_dropout(self.sources, dropout=dropout)
class CopyLayer(_ConcatInputLayer):
"""
This layer does nothing, it copies its input.
If multiple sources are provided, they are concatenated in the feature-dim.
"""
layer_class = "copy"
def __init__(self, **kwargs):
super(CopyLayer, self).__init__(**kwargs)
self.output = self.input_data
@classmethod
def get_out_data_from_opts(cls, sources=(), out_type=None, n_out=None, **kwargs):
if out_type or n_out:
return super(CopyLayer, cls).get_out_data_from_opts(out_type=out_type, n_out=n_out, sources=sources, **kwargs)
return get_concat_sources_data_template(sources)
class InternalLayer(LayerBase):
"""
This is not supposed to be used by the user.
It is used by some code to construct a wrapper layer or so.
"""
class ActivationLayer(CopyLayer):
"""
This layer just applies an activation function.
"""
layer_class = "activation"
def __init__(self, activation, **kwargs):
"""
:param str activation: e.g. "relu", "tanh", etc
"""
super(ActivationLayer, self).__init__(**kwargs)
x = self.input_data.placeholder
if activation:
from TFUtil import get_activation_function
act_func = get_activation_function(activation)
self.output_before_activation = OutputWithActivation(x, act_func=act_func)
else:
self.output_before_activation = OutputWithActivation(x)
self.output.placeholder = self.output_before_activation.y
class BatchNormLayer(CopyLayer):
"""
Implements batch-normalization (http://arxiv.org/abs/1502.03167) as a separate layer.
"""
layer_class = "batch_norm"
def __init__(self, **kwargs):
"""
All kwargs which are present in our base class are passed to our base class.
All remaining kwargs are used for self.batch_norm().
"""
kwargs = kwargs.copy()
import inspect
batch_norm_kwargs = inspect.getargspec(self.batch_norm).args[1:] # first is self, ignore
batch_norm_opts = {key: kwargs.pop(key)
for key in batch_norm_kwargs
if key in kwargs}
super(BatchNormLayer, self).__init__(use_batch_norm=batch_norm_opts or True, **kwargs)
class SliceLayer(_ConcatInputLayer):
"""
Slicing on the input, i.e. x[start:end:step] in some axis.
"""
layer_class = "slice"
def __init__(self, axis=None, axis_kind=None,
slice_start=None, slice_end=None, slice_step=None,
**kwargs):
"""
:param int|None axis:
:param str|None axis_kind: "T" for time, "B" for batch, "F" for feature
:param int|None slice_start:
:param int|None slice_end:
:param int|None slice_step:
:param int|None n_out:
"""
super(SliceLayer, self).__init__( **kwargs)
axis = self._get_axis(axis=axis, axis_kind=axis_kind, input_data=self.input_data)
dim_slice = slice(slice_start, slice_end, slice_step)
slices = [slice(None, None)] * axis + [dim_slice]
axis_wo_batch = self.input_data.get_batch_axis_excluding_batch(axis)
self.output.size_placeholder = self.input_data.size_placeholder
if axis == self.input_data.time_dim_axis:
if slice_start:
assert slice_start > 0
self.output.size_placeholder[self.input_data.time_dim_axis_excluding_batch] = \
tf.maximum(0, self.output.size_placeholder[self.input_data.time_dim_axis_excluding_batch] - slice_start)
if slice_end:
assert slice_end > 0
self.output.size_placeholder[self.input_data.time_dim_axis_excluding_batch] = \
tf.minimum(
tf.shape(self.input_data.placeholder)[self.input_data.time_dim_axis] - slice_end,
self.output.size_placeholder[self.input_data.time_dim_axis_excluding_batch])
if slice_step:
self.output.size_placeholder[self.input_data.time_dim_axis_excluding_batch] //= slice_step
elif axis_wo_batch is not None:
assert axis_wo_batch not in self.output.size_placeholder
self.output.placeholder = self.input_data.placeholder[slices]
@classmethod
def _get_axis(cls, axis, axis_kind, input_data):
"""
:param int|None axis:
:param str|None axis_kind: "T" for time, "B" for batch, "F" for feature
:param Data input_data:
:return: axis
:rtype: int
"""
if axis is not None:
assert not axis_kind
assert 0 <= axis < len(input_data.batch_shape)
else:
assert axis_kind
axis_kind = axis_kind.upper()
if axis_kind == "T":
assert input_data.time_dim_axis is not None
axis = input_data.time_dim_axis
elif axis_kind == "B":
assert input_data.batch_dim_axis is not None
axis = input_data.batch_dim_axis
elif axis_kind == "F":
axes = input_data.get_axes(exclude_time=True, exclude_batch=True)
assert len(axes) == 1
axis = axes[0]
return axis
@classmethod
def get_out_data_from_opts(
cls, axis=None, axis_kind=None, sources=(),
slice_start=None, slice_end=None, slice_step=None, **kwargs):
input_data = get_concat_sources_data_template(sources)
axis = cls._get_axis(axis=axis, axis_kind=axis_kind, input_data=input_data)
out_type = input_data.get_kwargs()
axis_wo_batch = input_data.get_batch_axis_excluding_batch(axis)
dim_slice = slice(slice_start, slice_end, slice_step)
if axis_wo_batch is not None:
out_type["shape"] = list(out_type["shape"])
if out_type["shape"][axis_wo_batch] is not None:
out_type["shape"][axis_wo_batch] = len(range(out_type["shape"][axis_wo_batch])[dim_slice])
if axis_wo_batch == len(out_type["shape"]) - 1 and not out_type["sparse"]:
out_type["dim"] = out_type["shape"][axis_wo_batch]
return Data(**out_type)
class LinearLayer(_ConcatInputLayer):
"""
Linear/forward/fully-connected/1x1-conv layer.
Does a linear transformation on the feature-dimension of the input
with an optional bias term and an optional activation function.
"""
layer_class = "linear"
def __init__(self, activation, with_bias=True, grad_filter=None, **kwargs):
"""
:param str|None activation: e.g. "relu", or None
:param bool with_bias:
:param float|None grad_filter: if grad norm is higher than this threshold (before activation), the grad is removed
"""
super(LinearLayer, self).__init__(**kwargs)
self.activation = activation
self.with_bias = with_bias
input_data = self.input_data
n_in = input_data.dim
n_out = self.output.dim
assert n_in and n_out, "%r and %r" % (input_data, self.output)
with var_creation_scope():
W = self.add_param(tf.Variable(
name="W",
initial_value=tf.contrib.layers.xavier_initializer(seed=self.network.random.randint(2**31))(
shape=(n_in, n_out))))
if self.with_bias:
b = self.add_param(tf.Variable(
name="b",
initial_value=tf.constant_initializer(value=0, dtype=tf.float32)(
shape=(n_out,))))
else:
b = None
with tf.name_scope("linear"):
from TFUtil import dot
x = input_data.placeholder
ndim = x.get_shape().ndims
if self.input_data.sparse:
if x.dtype in [tf.uint8, tf.int8, tf.uint16, tf.int16]:
x = tf.cast(x, tf.int32)
# Maybe optionally we could also use tf.contrib.layers.safe_embedding_lookup_sparse().
x = tf.nn.embedding_lookup(W, x)
ndim += 1
else:
x = dot(x, W)
assert x.get_shape().ndims == ndim
if self.with_bias:
x = tf.add(x, b, name="add_bias")
assert x.get_shape().ndims == ndim
if grad_filter:
x = TFUtil.filter_grad(
x,
threshold=grad_filter,
axis=[i for i in range(input_data.batch_ndim) if i != input_data.batch_dim_axis])
if self.activation:
from TFUtil import get_activation_function
act_func = get_activation_function(self.activation)
self.output_before_activation = OutputWithActivation(x, act_func=act_func)
else:
self.output_before_activation = OutputWithActivation(x)
x = self.output_before_activation.y
assert self.output.batch_dim_axis == self.input_data.batch_dim_axis
assert self.output.time_dim_axis == self.input_data.time_dim_axis
self.output.placeholder = x
class SoftmaxLayer(LinearLayer):
"""
Just a LinearLayer with activation="softmax" by default.
"""
layer_class = "softmax"
def __init__(self, activation="softmax", **kwargs):
super(SoftmaxLayer, self).__init__(activation=activation, **kwargs)
class ConstantLayer(LayerBase):
"""
Output is a constant value.
"""
layer_class = "constant"
def __init__(self, sources, value=0, dtype=None, **kwargs):
assert not sources, "constant layer cannot have sources"
super(ConstantLayer, self).__init__(**kwargs)
# Add batch-dim to the constant.
self.output.placeholder = tf.expand_dims(tf.constant(value, dtype=dtype), axis=0)
@classmethod
def get_out_data_from_opts(cls, name, dtype="float32", **kwargs):
return Data(
name="%s_const" % name, shape=(), batch_dim_axis=0, time_dim_axis=None, dtype=dtype)
class GatingLayer(_ConcatInputLayer):
"""
Splits the output into two equal parts, applies the gate_activation (sigmoid by default)
on the one part, some other activation (e.g. tanh) on the other part and then
element-wise multiplies them.
Thus, the output dimension is input-dimension / 2.
"""
layer_class = "gating"
def __init__(self, activation, gate_activation="sigmoid", **kwargs):
super(GatingLayer, self).__init__(**kwargs)