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Problem encoutered while reading image file : single-channel.ome.tif
itk::ExceptionObject (0x81520e0)
Location: "unknown"
File: /home/michael/Colocalization/ITK-4.5.1-build/Modules/Remote/SCIFIO
/src/itkSCIFIOImageIO.cxx
Line: 180
Description: itk::ERROR: SCIFIOImageIO(0x8150fb0): SCIFIOImageIO
exited abnormally. Exception in thread "main"
java.lang.IllegalStateException: ImageReader.getSeries: Current file
should not be null; call setId(String) first
at loci.formats.FormatTools.assertId(FormatTools.java:724)
at loci.formats.ImageReader.getReader(ImageReader.java:200)
at loci.formats.ImageReader.getSeries(ImageReader.java:441)
at loci.formats.ReaderWrapper.getSeries(ReaderWrapper.java:343)
at loci.scifio.itk.SCIFIOITKBridge.executeCommand(SCIFIOITKBridge.java:116)
at loci.scifio.itk.SCIFIOITKBridge.executeCommand(SCIFIOITKBridge.java:108)
at loci.scifio.itk.SCIFIOITKBridge.waitForInput(SCIFIOITKBridge.java:83)
at loci.scifio.itk.SCIFIOITKBridge.executeCommand(SCIFIOITKBridge.java:161)
at loci.scifio.itk.SCIFIOITKBridge.main(SCIFIOITKBridge.java:693)
There could be an issue where the reader can be constructed with a null id, and then its getSeries method checked. Should probably at least check if the current file is null before checking the series...
The text was updated successfully, but these errors were encountered:
Reported by Michael Meuli:
There could be an issue where the reader can be constructed with a null id, and then its getSeries method checked. Should probably at least check if the current file is null before checking the series...
The text was updated successfully, but these errors were encountered: