Project to create a large reference matrix from all scRNA-seq datasets with metadata on NCBI GEO. Utilizes PCA, clustering, and UMAP/tSNE
GSE113049: Single Cell RNA Sequencing Identifies TGFβ as a Key Regenerative Cue following LPS-induced Lung Injury, Mus musculus
GSE124952: Cell type-specific transcriptional programs in mouse prefrontal cortex during adolescence and addiction, Mus musculus
GSE143435: Single-cell transcriptomic atlas of FACS-sorted mouse muscle tissue cells, Mus musculus
GSE129933: Chronic Liver Disease in Humans Causes Expansion and Differentiation of Liver Lymphatic Endothelial Cells, Homo sapiens
GSE137710: Transcriptional basis of mouse and human dendritic cell heterogeneity revealed by single-cell profiling, Homo sapiens
GSE147405: Context specificity of the EMT transcriptional response, Homo sapiens