config_example.txt

## General Configuration

# specify gdal path - needed to extract HDF files
gdal_dir = "C:\\OSGeo4W64\\bin\\"

# overwrite outputs when running or skip the already processed files, set TRUE to overwrite, or FALSE to skip processed files
overwrite_files = FALSE

## This is not working for the current MCD version - keep at FALSE
# enables filtering by Quality Assessment bits (adjacent clouds and stuff), may reduce number of available pixels
is_qa_filter = TRUE

# configuration of earth data login and password - https://urs.earthdata.nasa.gov/
login_earthdata = "YOURLOGINHERE"
pwd_earthdata = "YOURPWDHERE"

# S3 configuration for uploading results
upload_to_s3 = TRUE
S3_profile = "ctrees"
S3_output_path = "s3://ctrees-input-data/AnisoVeg_MCD19A1/v061_1km/tiled/"


# Enable/Disable this setup by using TRUE or FALSE
if (TRUE) {
#####
## Setup: Test August 2021 Two tiles in the Amazon

# Product spatial resolution - either 1000 or 500 (m)
product_res = 1000
# Number of cores to use for processing
no_cores = 5
# View geometry can be one of this: "nadir", "backscat", or "forwardscat"
view_geometry = "nadir"
# Directory to place the processed data
process_dir = "/home/rstudio/_MAIAC_Month_Nadir/"
# Number of days on each composite, should be 8, 16 or 32, or "month" for monthly composites
composite_no = "month"
# Day of year of each composite (e.g. seq(16,352,16)), or months (e.g. 1:12) for monthly
#manual_doy = seq(16,352,16)
manual_doy = 1:12

# Tiles to process - 2000:2022
manual_year = c(2000:2022)
# Tiles to process - whole South America
manual_tile = c("h09v07", "h10v07", "h11v07", "h12v07", "h09v08", "h10v08", "h11v08", "h12v08", "h13v08", "h09v09", "h10v09", "h11v09", "h12v09", "h13v09", "h14v09", "h10v10", "h11v10", "h12v10", "h13v10", "h14v10", "h11v11", "h12v11", "h13v11", "h14v11", "h11v12", "h12v12", "h13v12", "h12v13", "h13v13", "h13v14", "h14v14")
# Merge info - do not change
manual_tmp_grid = expand.grid(manual_doy, manual_tile, manual_year)
# Set directory - may need to change this
manual_dir_tiles = paste0("/home/rstudio/MAIAC_Download/MCD19_", manual_tmp_grid$Var3,"/")
# Set up the vector - do not change
manual_run = cbind(manual_tmp_grid$Var1, manual_tmp_grid$Var3, manual_dir_tiles, as.character(manual_tmp_grid$Var2))
#####
}