ANARCI import

[Hrovatin]

I had issues installing AbNumber due to missing HMMER dependency on Mac M3, which I solved by the following workaround:

Instal hmmer
Install anarci via: git clone https://github.com/oxpig/ANARCI.git and follow instructions on github
Install abnumber via: pip install git+https://github.com/prihoda/abnumber

However, when importing abnumber I get this error

>>> import abnumber
ANARCI module not available. Please install it separately or install AbNumber through Bioconda
See: https://abnumber.readthedocs.io/

ANARCI seems to be working, but has different import name than specified in

AbNumber/abnumber/common.py

Line 7 in c3e869a

from anarci.anarci import anarci

The below namely works:

# Command
from ANARCI import anarci
anarci(
        [(f'id{1}', 'AATATATATAT')],
        scheme='imgt',
        allowed_species=None,
    )

#Out: 
([None],
 [None],
 [[['id',
    'description',
    'evalue',
    'bitscore',
    'bias',
    'query_start',
    'query_end']]])

So maybe

AbNumber/abnumber/common.py

Line 7 in c3e869a

from anarci.anarci import anarci

should be changed to from ANARCI import anarci