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could not find file basename.sessionInfo.mat #110

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Batter-Wang opened this issue Jun 19, 2024 · 1 comment
Open

could not find file basename.sessionInfo.mat #110

Batter-Wang opened this issue Jun 19, 2024 · 1 comment
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bug Something isn't working enhancement New feature or request

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@Batter-Wang
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Operating system
Windows11

Matlab version
matlab2021a

Describe the bug
I load kilosort rez.mat into cellexplorer and get a basename.session.mat. Then I try to use neuroScope2 to run sleepScore and it come an error said no basename.sessionInfo.mat. I wonder if there is some option to get basename.sessionInfo.mat from basename.session.mat

Matlab error log

NeuroScope2('session',session)
Scoring Recording: bandpass_diference
Warning: could not find file bandpass_diference.sessionInfo.mat running LoadParameters instead..
In bz_getSessionInfo (line 53)
In SleepScoreMaster (line 209)
In analysis_tools.states.run_SleepScoreMaster (line 23)
In NeuroScope2/analysis_wrapper (line 6647)
In uiwait (line 81)
In NeuroScope2 (line 161)
Warning: Escaped character '\B' is not valid. See 'doc sprintf' for supported special characters.
In LoadParameters (line 40)
In bz_getSessionInfo (line 55)
In SleepScoreMaster (line 209)
In analysis_tools.states.run_SleepScoreMaster (line 23)
In NeuroScope2/analysis_wrapper (line 6647)
In uiwait (line 81)
In NeuroScope2 (line 161)
Error using LoadParameters (line 40)
No .xml in FatterDocument

Error in bz_getSessionInfo (line 55)
sessionInfo = LoadParameters(basePath);

Error in SleepScoreMaster (line 209)
sessionInfo = bz_getSessionInfo(basePath,'noPrompts',noPrompts);

Error in analysis_tools.states.run_SleepScoreMaster (line 23)
SleepScoreMaster(data.session.general.basePath);

Error in NeuroScope2/analysis_wrapper (line 6647)
out = analysis_tools.states.(function1)('ephys',ephys,'UI',UI,'data',data);

Error while evaluating Menu Callback.

Operation terminated by user during uiwait (line 81)

In NeuroScope2 (line 161)
uiwait(UI.fig);

@Batter-Wang Batter-Wang added the bug Something isn't working label Jun 19, 2024
@petersenpeter
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Hi

The sleep scoring is dependent on the package Buzcode. It has been on my to-do list to make it independent, but I have not found the time. You have to put buzcode in your Matlab path and familiarize yourself a little with the metadata struct sessionInfo: https://github.com/buzsakilab/buzcode

@petersenpeter petersenpeter added the enhancement New feature or request label Nov 28, 2024
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