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@Mathepia Mathematical Epidemiology and Deep Learning

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    56 repositories

    • template-computo-julia

      Public template
      Computo template and documentation for Julia users
      TeX
      •3•0•0•0•Updated Apr 10, 2024Apr 10, 2024

    • Scientific-Programming-in-Julia

      Public
      Repository for B0M36SPJ
      Jupyter Notebook
      •
      MIT License
      •16•0•0•0•Updated Feb 4, 2024Feb 4, 2024

    • Bayesian-Filtering-and-Smoothing

      Public
      Companion Matlab and Python codes for the book Bayesian Filtering and Smoothing by Simo Särkkä and Lennart Svensson
      Jupyter Notebook
      •
      MIT License
      •17•0•0•0•Updated Feb 3, 2024Feb 3, 2024

    • Modern-CPP-Programming

      Public
      Modern C++ Programming Course (C++11/14/17/20)
      834•0•0•0•Updated Nov 27, 2023Nov 27, 2023

    • quarto_chapters

      Public
      Book Chapter Drafts
      HTML
      •
      BSD 3-Clause "New" or "Revised" License
      •6•0•0•0•Updated Sep 26, 2023Sep 26, 2023

    • modernjuliaworkflows.github.io

      Public
      Blog posts on best practices for Julia development
      CSS
      •19•0•0•0•Updated Sep 26, 2023Sep 26, 2023

    • CovidTimelineCanada

      Public
      A definitive dataset for COVID-19 in Canada.
      R
      •
      Other
      •11•0•0•0•Updated Aug 17, 2023Aug 17, 2023

    • NZWastewaterModelling

      Public
      Julia
      •5•0•0•0•Updated Jul 26, 2023Jul 26, 2023

    • tutorials

      Public
      This is the official repository for the "doggo dot jl" YouTube channel (fka "julia for talented amateurs").
      HTML
      •
      MIT License
      •58•0•0•0•Updated Jul 2, 2023Jul 2, 2023

    • Fenrir.jl

      Public
      Physics-Enhanced Regression for Initial Value Problems
      Julia
      •
      MIT License
      •2•0•0•0•Updated Jun 15, 2023Jun 15, 2023

    • julia-ml-course

      Public
      Julia programming for Machine Learning course at TU Berlin
      Julia
      •
      MIT License
      •28•0•0•0•Updated Jun 10, 2023Jun 10, 2023

    • epimdj

      Public
      A Julia port of the R code from Bjornstad's Epidemics: Models and Data Using R
      HTML
      •
      MIT License
      •1•0•0•0•Updated Jun 1, 2023Jun 1, 2023

    • JuliaEpiHandbook

      Public
      Trying to recreate a version of the EpiRHandbook for new Julia users
      JavaScript
      •1•1•0•0•Updated May 20, 2023May 20, 2023

    • Mathepia

      Public
      Mathepia Ecosystem Official Website
      JavaScript
      •0•0•0•0•Updated May 7, 2023May 7, 2023

    • .github

      Public
      Descriptions of Mathepia System
      0•0•0•0•Updated Apr 19, 2023Apr 19, 2023

    • DiffEqBayes.jl

      Public
      Extension functionality which uses Stan.jl, DynamicHMC.jl, and Turing.jl to estimate the parameters to differential equations and perform Bayesian probabilistic scientific machine learning
      Julia
      •
      Other
      •29•0•0•0•Updated Apr 11, 2023Apr 11, 2023

    • machine-learning-notes

      Public
      My continuously updated Machine Learning, Probabilistic Models and Deep Learning notes and demos (2000+ slides) 我不间断更新的机器学习，概率模型和深度学习的讲义(2000+页)和视频链接
      Jupyter Notebook
      •1.7k•0•0•0•Updated Mar 24, 2023Mar 24, 2023

    • COVID-19

      Public
      Novel Coronavirus (COVID-19) Cases, provided by JHU CSSE
      18k•0•0•0•Updated Mar 23, 2023Mar 23, 2023

    • Awesome-Diffusion-Models

      Public
      A collection of resources and papers on Diffusion Models
      MIT License
      •948•0•0•0•Updated Mar 14, 2023Mar 14, 2023

    • DDEBifurcationKit.jl

      Public
      numerical bifurcation analysis for DDE
      Julia
      •
      MIT License
      •3•0•0•203•Updated Feb 25, 2023Feb 25, 2023

    • Julia-for-Optimization-and-Learning

      Public
      Julia
      •
      MIT License
      •19•0•0•0•Updated Feb 15, 2023Feb 15, 2023

    • Bayesian-Julia

      Public
      Bayesian Statistics using Julia and Turing
      Julia
      •
      Creative Commons Attribution Share Alike 4.0 International
      •28•0•0•0•Updated Jan 24, 2023Jan 24, 2023

    • ProfileLikelihood.jl

      Public
      Julia package for estimating parameters, fitting data, and generating profile likelihood plots.
      Julia
      •
      MIT License
      •1•0•0•0•Updated Jan 22, 2023Jan 22, 2023

    • estimate-emergence-from-data

      Public
      Code for reproducing the results from the preprint "Estimating the date of emergence of an epidemic outbreak from detection data: Applications to COVID-19".
      R
      •
      MIT License
      •2•0•0•0•Updated Jan 13, 2023Jan 13, 2023

    • DynamicPPL.jl

      Public
      Implementation of domain-specific language (DSL) for dynamic probabilistic programming
      Julia
      •
      MIT License
      •30•0•0•0•Updated Jan 11, 2023Jan 11, 2023

    • mcmc-demo

      Public
      Interactive Markov-chain Monte Carlo Javascript demos
      JavaScript
      •
      MIT License
      •115•0•0•0•Updated Dec 24, 2022Dec 24, 2022

    • course-101-0250-00

      Public
      ETH course - Solving PDEs in parallel on GPUs
      Julia
      •
      Other
      •28•0•0•0•Updated Dec 20, 2022Dec 20, 2022

    • MathepiaTutorial

      Public
      Jupyter Notebook
      •0•0•0•0•Updated Dec 3, 2022Dec 3, 2022

    • awesome-sciml

      Public
      Awesome-spatial-temporal-scientific-machine-learning-data-mining-packages. Julia and Python resources on spatial and temporal data mining. Mathematical epidemiology as an application. Most about package information. Data Sources Links and Epidemic Repos are also included.
      data-sciencemachine-learningdeep-learningtime-seriesjuliascientific-computingprobabilistic-programmingbayesian-inferencemathematical-biologybayesian-deep-learning
      JavaScript
      •
      MIT License
      •1•9•0•0•Updated Dec 3, 2022Dec 3, 2022

    • MathepiaPrograms

      Public
      Resources about projects on mathematical biology.
      mathematical-biologymathematical-epidemiology
      JavaScript
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      MIT License
      •0•0•0•0•Updated Dec 3, 2022Dec 3, 2022