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Implement a Python binding for Spark analysis #1

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imedina opened this issue Nov 23, 2018 · 1 comment
Open

Implement a Python binding for Spark analysis #1

imedina opened this issue Nov 23, 2018 · 1 comment
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@roldanx
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pyOskar Issues about Python binding spark-analysis New Spark analysis
Milestone
v1.0.0

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@imedina
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imedina commented Nov 23, 2018

Spark analysis are being implemented in Java. Most of the users will feel more comfortable using a Python library. This will also allow using a inotebook for interactive analysis.

A Python binding for Spark should be implemented with all functionality developed.
@imedina imedina added spark-analysis New Spark analysis pyOskar Issues about Python binding labels Nov 23, 2018
@imedina imedina added this to the v1.0.0 milestone Nov 23, 2018
@roldanx roldanx self-assigned this Nov 23, 2018
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roldanx commented Nov 29, 2018

This implementation was fulfilled on this commits, from latest to soonest:
02e0156
1a0c9bf
09a1b2d
cd40308
20f5c8c
26859c2
405737d
874e737
c9741de

@roldanx roldanx closed this as completed Nov 29, 2018
@j-coll j-coll reopened this Nov 29, 2018
imedina pushed a commit that referenced this issue Dec 10, 2018
@roldanx
Merge pull request #1 from roldanx/issue-1
603de5d 
Issue 1
imedina pushed a commit that referenced this issue Dec 10, 2018
@roldanx
spark: add comments to binding #1
ab5fa85
j-coll pushed a commit that referenced this issue Dec 14, 2018
@roldanx
spark: correct python2.7 incompatibility #1
c38d4b7 
due to a non-ascii character on core/inbreedingCoefficient
j-coll pushed a commit that referenced this issue Dec 14, 2018
@roldanx
spark: change metadata.samples return from javalist to pylist #1
ad552c3
imedina pushed a commit that referenced this issue Jan 18, 2019
@roldanx
spark: correct test_oskar errors #1
c4cd4f2
imedina pushed a commit that referenced this issue Jan 18, 2019
@roldanx
spark: change udf-test style #1
08a0eae
imedina pushed a commit that referenced this issue Jan 18, 2019
@roldanx
spark: add chromDensity transformer to python API #1
35e0bea
imedina pushed a commit that referenced this issue Jan 18, 2019
@roldanx
spark: add IBD Transformer to python API #1
d6ea5b5
imedina pushed a commit that referenced this issue Jan 18, 2019
@roldanx
spark: add oskar_test correction #1
8044aba
imedina pushed a commit that referenced this issue Feb 1, 2019
@roldanx
spark: add PCAtransformer binding and test #1
a6c3be2
imedina pushed a commit that referenced this issue Feb 1, 2019
@roldanx
Merge pull request #3 from roldanx/issue-1
055bbe9 
spark: add PCAtransformer binding and test #1
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pyOskar Issues about Python binding spark-analysis New Spark analysis
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v1.0.0
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