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Output aligment stats in plain text format #104

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jtarraga opened this issue Sep 21, 2016 · 0 comments
Open

Output aligment stats in plain text format #104

jtarraga opened this issue Sep 21, 2016 · 0 comments
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@jtarraga
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Currently, the 'alginment stats' command line outputs stats in JSON format. In order to make more understable the stats, 'alignment stats' should output the stats in plain text format. A new optional parameter should be added, e.g.: --text:

./build/bin/hpg-bigdata-local.sh alignment stats --i test.bam.avro --text

@jtarraga jtarraga self-assigned this Sep 21, 2016
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