Error in substring(line, 1, 1): invalid multibyte string at '<eb><f2>�<87><04>'

[bschilder]

1. Bug description

Error when importing peak files from ENCODE.

Console output

Processing id(s).
1 unique ENCODE id(s) identified.
Querying 1 id(s) from: ENCODE
Importing metadata via AnnotationHub.
snapshotDate(): 2022-04-21
loading from cache
Filtering by: file_type
Returning filtered metadata: 454,413 entries.
129,530 rows remain after filtering by genome build: GRCh38
Searching ENCODE metadata for: ENCSR000AKP
Identified 8 files: narrowpeak
Identified 6 files: bigwig
Processing id: >>> ENCSR000AKP <<<


Importing pre-computed narrowPeak files.
Error: BiocParallel errors
  1 remote errors, element index: 1
  0 unevaluated and other errors
  first remote error:
Error in substring(line, 1, 1): invalid multibyte string at '<eb><f2>�<87><04>'

Expected behaviour

Import all peak files

2. Reproducible example

Code

reference <- PeakyFinders::import_peaks(ids =   "ENCSR000AKP" 
                                        builds = "GRCh38")

3. Session info

R version 4.2.0 (2022-04-22)
Platform: x86_64-apple-darwin17.0 (64-bit)
Running under: macOS Monterey 12.3.1

Matrix products: default
LAPACK: /Library/Frameworks/R.framework/Versions/4.2/Resources/lib/libRlapack.dylib

locale:
[1] en_GB.UTF-8/en_GB.UTF-8/en_GB.UTF-8/C/en_GB.UTF-8/en_GB.UTF-8

attached base packages:
[1] stats4    stats     graphics  grDevices utils     datasets  methods   base     

other attached packages:
 [1] PeakyFinders_0.99.1  EpiCompare_0.99.20   Matrix_1.4-1         GenomicRanges_1.48.0 ggplot2_3.3.6       
 [6] dplyr_1.0.9          GenomeInfoDb_1.32.2  IRanges_2.30.0       S4Vectors_0.34.0     BiocGenerics_0.42.0 

loaded via a namespace (and not attached):
  [1] utf8_1.2.2                              R.utils_2.11.0                         
  [3] reticulate_1.25                         tidyselect_1.1.2                       
  [5] RSQLite_2.2.14                          AnnotationDbi_1.58.0                   
  [7] htmlwidgets_1.5.4                       grid_4.2.0                             
  [9] BiocParallel_1.30.3                     scatterpie_0.1.7                       
 [11] munsell_0.5.0                           codetools_0.2-18                       
 [13] withr_2.5.0                             colorspace_2.0-3                       
 [15] GOSemSim_2.22.0                         Biobase_2.56.0                         
 [17] filelock_1.0.2                          MACSr_1.4.0                            
 [19] knitr_1.39                              rstudioapi_0.13                        
 [21] DOSE_3.22.0                             MatrixGenerics_1.8.0                   
 [23] GenomeInfoDbData_1.2.8                  polyclip_1.10-0                        
 [25] seqPattern_1.28.0                       bit64_4.0.5                            
 [27] farver_2.1.0                            rprojroot_2.0.3                        
 [29] basilisk_1.8.0                          vctrs_0.4.1                            
 [31] treeio_1.20.0                           generics_0.1.2                         
 [33] xfun_0.31                               BiocFileCache_2.4.0                    
 [35] regioneR_1.28.0                         R6_2.5.1                               
 [37] graphlayouts_0.8.0                      locfit_1.5-9.5                         
 [39] bitops_1.0-7                            BRGenomics_1.8.0                       
 [41] cachem_1.0.6                            fgsea_1.22.0                           
 [43] gridGraphics_0.5-1                      DelayedArray_0.22.0                    
 [45] assertthat_0.2.1                        promises_1.2.0.1                       
 [47] BiocIO_1.6.0                            scales_1.2.0                           
 [49] ggraph_2.0.5                            enrichplot_1.16.1                      
 [51] gtable_0.3.0                            tidygraph_1.2.1                        
 [53] rlang_1.0.2                             genefilter_1.78.0                      
 [55] splines_4.2.0                           rtracklayer_1.56.0                     
 [57] lazyeval_0.2.2                          GEOquery_2.64.2                        
 [59] impute_1.70.0                           BiocManager_1.30.18                    
 [61] yaml_2.3.5                              reshape2_1.4.4                         
 [63] GenomicFeatures_1.48.3                  httpuv_1.6.5                           
 [65] qvalue_2.28.0                           tools_4.2.0                            
 [67] ggplotify_0.1.0                         gridBase_0.4-7                         
 [69] ellipsis_0.3.2                          gplots_3.1.3                           
 [71] RColorBrewer_1.1-3                      Rcpp_1.0.8.3                           
 [73] plyr_1.8.7                              progress_1.2.2                         
 [75] zlibbioc_1.42.0                         purrr_0.3.4                            
 [77] RCurl_1.98-1.7                          basilisk.utils_1.8.0                   
 [79] prettyunits_1.1.1                       viridis_0.6.2                          
 [81] SummarizedExperiment_1.26.1             ggrepel_0.9.1                          
 [83] magrittr_2.0.3                          data.table_1.14.2                      
 [85] DO.db_2.9                               matrixStats_0.62.0                     
 [87] pkgload_1.2.4                           hms_1.1.1                              
 [89] patchwork_1.1.1                         mime_0.12                              
 [91] evaluate_0.15                           xtable_1.8-4                           
 [93] XML_3.99-0.9                            gridExtra_2.3                          
 [95] testthat_3.1.4                          compiler_4.2.0                         
 [97] biomaRt_2.52.0                          tibble_3.1.7                           
 [99] KernSmooth_2.23-20                      crayon_1.5.1                           
[101] shadowtext_0.1.2                        R.oo_1.24.0                            
[103] htmltools_0.5.2                         ggfun_0.0.6                            
[105] later_1.3.0                             tzdb_0.3.0                             
[107] tidyr_1.2.0                             geneplotter_1.74.0                     
[109] aplot_0.1.6                             DBI_1.1.2                              
[111] ExperimentHub_2.4.0                     tweenr_1.0.2                           
[113] ChIPseeker_1.32.0                       genomation_1.28.0                      
[115] dbplyr_2.2.0                            MASS_7.3-57                            
[117] rappdirs_0.3.3                          boot_1.3-28                            
[119] readr_2.1.2                             brio_1.1.3                             
[121] cli_3.3.0                               R.methodsS3_1.8.1                      
[123] parallel_4.2.0                          igraph_1.3.1                           
[125] pkgconfig_2.0.3                         TxDb.Hsapiens.UCSC.hg19.knownGene_3.2.2
[127] dir.expiry_1.4.0                        GenomicAlignments_1.32.0               
[129] plotly_4.10.0                           xml2_1.3.3                             
[131] ggtree_3.4.0                            annotate_1.74.0                        
[133] XVector_0.36.0                          yulab.utils_0.0.4                      
[135] stringr_1.4.0                           digest_0.6.29                          
[137] Biostrings_2.64.0                       rmarkdown_2.14                         
[139] fastmatch_1.1-3                         tidytree_0.3.9                         
[141] restfulr_0.0.14                         curl_4.3.2                             
[143] shiny_1.7.1                             Rsamtools_2.12.0                       
[145] gtools_3.9.2.1                          rjson_0.2.21                           
[147] lifecycle_1.0.1                         nlme_3.1-157                           
[149] jsonlite_1.8.0                          limma_3.52.1                           
[151] desc_1.4.1                              viridisLite_0.4.0                      
[153] BSgenome_1.64.0                         fansi_1.0.3                            
[155] pillar_1.7.0                            lattice_0.20-45                        
[157] KEGGREST_1.36.0                         fastmap_1.1.0                          
[159] httr_1.4.3                              plotrix_3.8-2                          
[161] survival_3.3-1                          GO.db_3.15.0                           
[163] interactiveDisplayBase_1.34.0           glue_1.6.2                             
[165] png_0.1-7                               BiocVersion_3.15.2                     
[167] bit_4.0.4                               ggforce_0.3.3                          
[169] stringi_1.7.6                           blob_1.2.3                             
[171] DESeq2_1.36.0                           AnnotationHub_3.4.0                    
[173] caTools_1.18.2                          memoise_2.0.1                          
[175] ape_5.6-2