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[ENH] - Update libstdc++.so.6 on Nebari #94

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kcpevey opened this issue Sep 8, 2023 · 5 comments
Open

[ENH] - Update libstdc++.so.6 on Nebari #94

kcpevey opened this issue Sep 8, 2023 · 5 comments

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@kcpevey
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kcpevey commented Sep 8, 2023

Feature description

Nebari comes with libstdc++.so.6 installed, but its not up to date.

scipy is looking for libstdc++.so.6: version 'GLIBCXX_3.4.29' but this isn't available on Nebari.

I can install an updated version into my conda env by installing this package libstdcxx-ng. However, scipy will still attempt to look for it here /lib/x86_64-linux-gnu/libstdc++.so.6.

The workaround is to add an extra entry to my LD_LIBRARY_PATH that points to my conda env where its installed.

export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/home/conda/[email protected]/envs/[email protected]/lib

This solution works but is rather hacky.

Value and/or benefit

An up to date Nebari that can be used without workarounds.

Anything else?

No response

@kcpevey kcpevey added the type: enhancement 💅🏼 New feature or request label Sep 8, 2023
@iameskild
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Sounds good to me, I think we only need to add it apt.txt for the JupyterLab images.

@iameskild
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@kcpevey to confirm, we need to include this in the upcoming release right?

@kcpevey
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kcpevey commented Sep 12, 2023

@iameskild this could be pushed to the next release

@iameskild
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If this package is already included but needs to be updated, perhaps rebuilding the image will be sufficient.

@kcpevey
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kcpevey commented Sep 14, 2023

This is completely outside my realm of knowledge so I'm no help here.

@iameskild iameskild transferred this issue from nebari-dev/nebari Nov 8, 2023
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