Request methods to plot signals in a specific regions

[liuyang2006]

Dear ONT,

For POD5 files, I want to plot the raw signals with basecalled results in a region, e.g., 12-20 base-pairs. Is there a package or functions to extract the signal with related basecalling results together?

Thank you!

Best,
Yang

[Psy-Fer]

Hey,

I'm not from ONT but this might be the tool you are looking for

https://github.com/hiruna72/squigualiser

Cheers,
James

[liuyang2006]

Hi James,

This is indeed a beautiful tool! Thank you for sharing!

Best,
Yang