CITATION.cff

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cff-version: 1.2.0
title: waveorder
message: >-
  Wave optical models and inverse algorithms for label-agnostic imaging of density & orientation.
type: software
authors:
  - given-names: Talon
    family-names: Chandler
    affiliation: Chan Zuckerberg Biohub San Francisco
    orcid: 'https://orcid.org/0000-0002-3033-674X'
  - given-names: Li-Hao
    family-names: Yeh
    affiliation: Chan Zuckerberg Biohub San Francisco
    orcid: 'https://orcid.org/0000-0003-2803-5996'
  - given-names: Ivan
    family-names: Ivanov
    affiliation: Chan Zuckerberg Biohub San Francisco
    orcid: 'https://orcid.org/0000-0002-4675-5287'
  - given-names: Cameron
    family-names: Foltz
    affiliation: Chan Zuckerberg Biohub San Francisco
    orcid: 'https://orcid.org/0000-0001-8933-2172'
  - given-names: Ziwen
    family-names: Liu
    affiliation: Chan Zuckerberg Biohub San Francisco
    orcid: 'https://orcid.org/0000-0001-7482-1299'
  - given-names: Shalin
    family-names: Mehta
    affiliation: Chan Zuckerberg Biohub San Francisco
    orcid: 'https://orcid.org/0000-0002-2542-3582'
identifiers:
  - type: doi
    value: 10.1101/2020.12.15.422951
    description: Preprint on permittivity tensor imaging
  - type: doi
    value: 10.7554/eLife.55502
    description: >-
      Publication: Quantitative label-free imaging with
      phase & polarization
  - type: url
    value: 'https://www.napari-hub.org/plugins/recOrder-napari'
    description: >-
      recOrder-napari plugin for label-free imaging that
      depends on waveOrder library
  - type: doi
    value: 10.1364/BOE.455770
    description: >-
      Publication: Correlative imaging of spatio-angular
      dynamics
repository-code: 'https://github.com/mehta-lab/waveorder'
url: 'https://www.czbiohub.org/comp-micro/'
abstract: >-
  This package enables wave-optical simulation and
  reconstruction of optical properties that report
  microscopic architectural order. This software is of
  potential interest to computational imaging, physical
  biology, and high-content screening communities.
keywords:
  - optics
  - phase
  - polarization
  - permittivity
  - scattering
  - label-free imaging
  - permittivity-tensor-imaging
  - qlipp
  - mipolscope
  - simulation
  - reconstruction
license: BSD-3-Clause
version: 2.1.0
date-released: '2024-03-12'