Make running on batch possible

[AvivCukierman]

No description provided.

[kratsg]

I honestly wrote it that it's technically easy to implement. It just needs someone to sit down and write it.

Basically, it would be a separate file -- perhaps a RootCore package that includes Optimization as a submodule and would have a script similar to optimize in that it would take in all the files to run over, and it would let SampleHandler split it up, but the job itself would be to call do_optimize over each input. You just need to specify the correct directory into the function, and it should sort of handle itself. Or just have a separate python script that import optimize to grab all the helper functions.

[kratsg]

For reference, the best kind of script will be something like this one:

https://github.com/kratsg/TheAccountant/blob/master/scripts/GetWeights.py

[kratsg]

https://github.com/kratsg/optimization#on-a-cvmfs-enabled-machine -- with the CVMFS instructions here.. it is now possible to set up a consistent python environment and create a shell script that does the setup, and then execute the commands. Let me know if this isn't sufficient.