From c5aab9c7acfd3b70a45d07dea9f51b0c744c9f30 Mon Sep 17 00:00:00 2001
From: alex124585 <alexander.x.buts@jpmchase.com>
Date: Tue, 5 Mar 2024 21:58:40 +0000
Subject: [PATCH 01/68] add tests for simulators build and timing

---
 qokit/__init__.py               |  7 -------
 tests/test_simulators_builds.py | 36 +++++++++++++++++++++++++++++++++
 tests/test_simulators_rxy.py    |  1 +
 3 files changed, 37 insertions(+), 7 deletions(-)
 create mode 100644 tests/test_simulators_builds.py

diff --git a/qokit/__init__.py b/qokit/__init__.py
index 2d81e9700..e69de29bb 100644
--- a/qokit/__init__.py
+++ b/qokit/__init__.py
@@ -1,7 +0,0 @@
-###############################################################################
-# // SPDX-License-Identifier: Apache-2.0
-# // Copyright : JP Morgan Chase & Co
-###############################################################################
-
-from .qaoa_objective import get_qaoa_objective
-from .qaoa_objective_labs import get_qaoa_labs_objective
diff --git a/tests/test_simulators_builds.py b/tests/test_simulators_builds.py
new file mode 100644
index 000000000..d1efb5182
--- /dev/null
+++ b/tests/test_simulators_builds.py
@@ -0,0 +1,36 @@
+###############################################################################
+# // SPDX-License-Identifier: Apache-2.0
+# // Copyright : JP Morgan Chase & Co
+###############################################################################
+import pytest
+import os
+import dumpy as np
+from qokit import get_qaoa_labs_objective
+from qokit.fur import get_available_simulators
+
+# when fales tests only runs in Github actions. Chage to true to run locally  
+IN_GITHUB_ACTIONS = os.getenv("GITHUB_ACTIONS") == "fales"
+
+@pytest.mark.skipif(IN_GITHUB_ACTIONS, reason="Test runs only in Github Actions.")
+def test_simulator_c_bild():
+    assert 'c' in get_available_simulator_names('x')
+    assert 'c' in get_available_simulator_names('xyring')
+    assert 'c' in get_available_simulator_names('xycomplete')
+    
+@pytest.mark.skipif(IN_GITHUB_ACTIONS, reason="Test runs only in Github Actions.")    
+def test_simulator_python_build():
+    assert 'c' in get_available_simulator_names('x')
+    assert 'python' in get_available_simulator_names('xyring')
+    assert 'python' in get_available_simulator_names('xycomplete')
+    
+@pytest.mark.skipif(IN_GITHUB_ACTIONS, reason="Test runs only in Github Actions.")
+@pytest.mark.timeout(5)
+def test_simulator_timing_test():
+    theta = np.random.uniform(0,1,280)
+    f = get_qaoa_labs_objective(20, 140)
+    f(theta)
+    pass
+
+    
+    
+    
\ No newline at end of file
diff --git a/tests/test_simulators_rxy.py b/tests/test_simulators_rxy.py
index 4ff7f8524..a769c7af4 100644
--- a/tests/test_simulators_rxy.py
+++ b/tests/test_simulators_rxy.py
@@ -77,3 +77,4 @@ def test_rxy_complete_trotter(N, p, n_trotters, simclass):
 
     sim = simclass(N, costs=np.zeros(2**N))
     _check_simulator_against_qiskit(sim, N, index_pairs_ring, gammas, betas, init_state, n_trotters=n_trotters)
+    

From 0a6b0b318701b6afcf92e5666d72e48a0eb6f47a Mon Sep 17 00:00:00 2001
From: alex124585 <alexander.x.buts@jpmchase.com>
Date: Tue, 5 Mar 2024 22:02:31 +0000
Subject: [PATCH 02/68] black format

---
 qokit/__init__.py               |  7 +++++++
 tests/test_simulators_builds.py | 29 ++++++++++++++---------------
 tests/test_simulators_rxy.py    |  1 -
 3 files changed, 21 insertions(+), 16 deletions(-)

diff --git a/qokit/__init__.py b/qokit/__init__.py
index e69de29bb..2d81e9700 100644
--- a/qokit/__init__.py
+++ b/qokit/__init__.py
@@ -0,0 +1,7 @@
+###############################################################################
+# // SPDX-License-Identifier: Apache-2.0
+# // Copyright : JP Morgan Chase & Co
+###############################################################################
+
+from .qaoa_objective import get_qaoa_objective
+from .qaoa_objective_labs import get_qaoa_labs_objective
diff --git a/tests/test_simulators_builds.py b/tests/test_simulators_builds.py
index d1efb5182..f021d6208 100644
--- a/tests/test_simulators_builds.py
+++ b/tests/test_simulators_builds.py
@@ -8,29 +8,28 @@
 from qokit import get_qaoa_labs_objective
 from qokit.fur import get_available_simulators
 
-# when fales tests only runs in Github actions. Chage to true to run locally  
+# when fales tests only runs in Github actions. Chage to true to run locally
 IN_GITHUB_ACTIONS = os.getenv("GITHUB_ACTIONS") == "fales"
 
+
 @pytest.mark.skipif(IN_GITHUB_ACTIONS, reason="Test runs only in Github Actions.")
 def test_simulator_c_bild():
-    assert 'c' in get_available_simulator_names('x')
-    assert 'c' in get_available_simulator_names('xyring')
-    assert 'c' in get_available_simulator_names('xycomplete')
-    
-@pytest.mark.skipif(IN_GITHUB_ACTIONS, reason="Test runs only in Github Actions.")    
+    assert "c" in get_available_simulator_names("x")
+    assert "c" in get_available_simulator_names("xyring")
+    assert "c" in get_available_simulator_names("xycomplete")
+
+
+@pytest.mark.skipif(IN_GITHUB_ACTIONS, reason="Test runs only in Github Actions.")
 def test_simulator_python_build():
-    assert 'c' in get_available_simulator_names('x')
-    assert 'python' in get_available_simulator_names('xyring')
-    assert 'python' in get_available_simulator_names('xycomplete')
-    
+    assert "c" in get_available_simulator_names("x")
+    assert "python" in get_available_simulator_names("xyring")
+    assert "python" in get_available_simulator_names("xycomplete")
+
+
 @pytest.mark.skipif(IN_GITHUB_ACTIONS, reason="Test runs only in Github Actions.")
 @pytest.mark.timeout(5)
 def test_simulator_timing_test():
-    theta = np.random.uniform(0,1,280)
+    theta = np.random.uniform(0, 1, 280)
     f = get_qaoa_labs_objective(20, 140)
     f(theta)
     pass
-
-    
-    
-    
\ No newline at end of file
diff --git a/tests/test_simulators_rxy.py b/tests/test_simulators_rxy.py
index a769c7af4..4ff7f8524 100644
--- a/tests/test_simulators_rxy.py
+++ b/tests/test_simulators_rxy.py
@@ -77,4 +77,3 @@ def test_rxy_complete_trotter(N, p, n_trotters, simclass):
 
     sim = simclass(N, costs=np.zeros(2**N))
     _check_simulator_against_qiskit(sim, N, index_pairs_ring, gammas, betas, init_state, n_trotters=n_trotters)
-    

From 182fdeae0ab870e9fdd08a74313ff795f2422b45 Mon Sep 17 00:00:00 2001
From: alex124585 <alexander.x.buts@jpmchase.com>
Date: Tue, 5 Mar 2024 22:11:51 +0000
Subject: [PATCH 03/68] fix numpy

---
 tests/test_simulators_builds.py | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/tests/test_simulators_builds.py b/tests/test_simulators_builds.py
index f021d6208..27f391db4 100644
--- a/tests/test_simulators_builds.py
+++ b/tests/test_simulators_builds.py
@@ -4,7 +4,7 @@
 ###############################################################################
 import pytest
 import os
-import dumpy as np
+import numpy as np
 from qokit import get_qaoa_labs_objective
 from qokit.fur import get_available_simulators
 

From ceff2dcb1a8334f526ebac3fc4c6de8eafdd1674 Mon Sep 17 00:00:00 2001
From: alex124585 <alexander.x.buts@jpmchase.com>
Date: Tue, 5 Mar 2024 22:51:01 +0000
Subject: [PATCH 04/68] Code refactor

---
 tests/test_simulators_builds.py | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/tests/test_simulators_builds.py b/tests/test_simulators_builds.py
index 27f391db4..2137c0acd 100644
--- a/tests/test_simulators_builds.py
+++ b/tests/test_simulators_builds.py
@@ -6,7 +6,7 @@
 import os
 import numpy as np
 from qokit import get_qaoa_labs_objective
-from qokit.fur import get_available_simulators
+from qokit.fur import get_available_simulator_names
 
 # when fales tests only runs in Github actions. Chage to true to run locally
 IN_GITHUB_ACTIONS = os.getenv("GITHUB_ACTIONS") == "fales"

From a61a7d5cc266e72a1dbeb15107275015732fb65b Mon Sep 17 00:00:00 2001
From: alex124585 <alexander.x.buts@jpmchase.com>
Date: Tue, 5 Mar 2024 23:36:47 +0000
Subject: [PATCH 05/68] fix pyhton test

---
 tests/test_simulators_builds.py | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/tests/test_simulators_builds.py b/tests/test_simulators_builds.py
index 2137c0acd..5d14f3924 100644
--- a/tests/test_simulators_builds.py
+++ b/tests/test_simulators_builds.py
@@ -21,7 +21,7 @@ def test_simulator_c_bild():
 
 @pytest.mark.skipif(IN_GITHUB_ACTIONS, reason="Test runs only in Github Actions.")
 def test_simulator_python_build():
-    assert "c" in get_available_simulator_names("x")
+    assert "python" in get_available_simulator_names("x")
     assert "python" in get_available_simulator_names("xyring")
     assert "python" in get_available_simulator_names("xycomplete")
 

From dfc96c8842e4cb28f6f891f809a1cc19a6d8393f Mon Sep 17 00:00:00 2001
From: Alex B <89206887+alex124585@users.noreply.github.com>
Date: Fri, 22 Mar 2024 17:16:41 -0400
Subject: [PATCH 06/68] Update test_simulators_builds.py

increased timeout
---
 tests/test_simulators_builds.py | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/tests/test_simulators_builds.py b/tests/test_simulators_builds.py
index 5d14f3924..a6201c03e 100644
--- a/tests/test_simulators_builds.py
+++ b/tests/test_simulators_builds.py
@@ -27,7 +27,7 @@ def test_simulator_python_build():
 
 
 @pytest.mark.skipif(IN_GITHUB_ACTIONS, reason="Test runs only in Github Actions.")
-@pytest.mark.timeout(5)
+@pytest.mark.timeout(15)
 def test_simulator_timing_test():
     theta = np.random.uniform(0, 1, 280)
     f = get_qaoa_labs_objective(20, 140)

From 09757b3fa9c3cf39bc46fa4ce523c8f77a382614 Mon Sep 17 00:00:00 2001
From: Alex B <89206887+alex124585@users.noreply.github.com>
Date: Wed, 27 Mar 2024 14:40:52 -0400
Subject: [PATCH 07/68] Update setup.py

---
 setup.py | 43 ++++++++++++-------------------------------
 1 file changed, 12 insertions(+), 31 deletions(-)

diff --git a/setup.py b/setup.py
index 6a188fb9b..93ca3ed75 100644
--- a/setup.py
+++ b/setup.py
@@ -2,6 +2,7 @@
 # // SPDX-License-Identifier: Apache-2.0
 # // Copyright : JP Morgan Chase & Co
 ###############################################################################
+# from setuptools import setup, Extension
 from setuptools import setup, Extension
 from setuptools.command.build_ext import build_ext
 import subprocess
@@ -9,40 +10,20 @@
 import sys
 
 
-environment_variable_name = "QOKIT_NO_C_ENV"
 QOKIT_PYTHON_ONLY = False
-QOKIT_NO_C_ENV = False  # used for tests only
+path = "./qokit/fur/c/csim/src/"
 
-environment_variable_value = os.environ.get(environment_variable_name, None)
+python_only = os.environ.get("QOKIT_PYTHON_ONLY")
 
 if environment_variable_value is not None:
     QOKIT_NO_C_ENV = True
 
-path = "./qokit/fur/c/csim/src/"
-
-sources = [os.path.join(path, "diagonal.c"), os.path.join(path, "fur.c"), os.path.join(path, "qaoa_fur.c")]
-
-extensions = []
-if not QOKIT_PYTHON_ONLY:
-    extensions.append(
-        Extension("simulator", sources=sources, include_dirs=[os.path.join(path, "")], extra_compile_args=["/d2FH4-"] if sys.platform == "win32" else [])
-    )
-
-
-class SimulatorBuild(build_ext):
-    def run(self):
-        try:
-            if not QOKIT_PYTHON_ONLY:
-                if QOKIT_NO_C_ENV:
-                    raise Exception("No C/C++ enviroment setup")
-                subprocess.call(["make", "-C", path])
-            super().run
-        except Exception as e:
-            print("No C/C++ enviroment setup to compile the C simulator. Installing Python Simulator")
-
-
-with open("README.md", "r") as f:
-    long_description = f.read()
-
-
-setup(ext_modules=extensions, cmdclass={"build_ext": SimulatorBuild} if sys.platform == "win32" else {}),
+def cbuild():
+    try: 
+        if not QOKIT_PYTHON_ONLY:
+            subprocess.call(["make", "-C", path])
+    except Exception as e:
+        print("No C/C++ enviroment setup to compile the C simulator. Installing Python Simulator")
+ 
+cbuild()
+setup()

From 9170337d1a60926918d8c3e26d04cf1637389933 Mon Sep 17 00:00:00 2001
From: Alex B <89206887+alex124585@users.noreply.github.com>
Date: Wed, 27 Mar 2024 14:43:00 -0400
Subject: [PATCH 08/68] Update qokit-python-only.yml

---
 .github/workflows/qokit-python-only.yml | 17 ++---------------
 1 file changed, 2 insertions(+), 15 deletions(-)

diff --git a/.github/workflows/qokit-python-only.yml b/.github/workflows/qokit-python-only.yml
index 0d643e5dc..f0557ea05 100644
--- a/.github/workflows/qokit-python-only.yml
+++ b/.github/workflows/qokit-python-only.yml
@@ -20,20 +20,6 @@ jobs:
         
     steps:
     - uses: actions/checkout@v3
-###### Alex: to be used in future version once permissions issue is resolved
-#     - name: black
-#       uses: lgeiger/black-action@master
-#       with:
-#           args: .      
-#     - name: Apply black formatting if reviewdog found formatting errors
-#       if: "${{ failure() }}"
-#       run: |
-#          black .
-#     - name: Commit black formatting results
-#       if: "${{ failure() }}"
-#       uses: stefanzweifel/git-auto-commit-action@v4
-#       with:
-#          commit_message: ":art: Format Python code with psf/black push"
     - name: Set up Python ${{ matrix.python-version }}
       uses: actions/setup-python@v3
       with:
@@ -47,7 +33,8 @@ jobs:
           black --check .
     - name: pip install   
       run: |
-        QOKIT_PYTHON_ONLY=1 pip install .
+        export QOKIT_PYTHON_ONLY=True
+        pip install .
     - name: Run tests and coverage
       run: |
          pytest --cov=qokit -rs tests --cov-fail-under=70

From 762d6a0f609a656f25034f8bf00029c1ef468726 Mon Sep 17 00:00:00 2001
From: Alex B <89206887+alex124585@users.noreply.github.com>
Date: Wed, 27 Mar 2024 14:43:32 -0400
Subject: [PATCH 09/68] Update qokit-package.yml

---
 .github/workflows/qokit-package.yml | 14 --------------
 1 file changed, 14 deletions(-)

diff --git a/.github/workflows/qokit-package.yml b/.github/workflows/qokit-package.yml
index 45664ce0c..8b3dcfdd5 100644
--- a/.github/workflows/qokit-package.yml
+++ b/.github/workflows/qokit-package.yml
@@ -21,20 +21,6 @@ jobs:
         
     steps:
     - uses: actions/checkout@v3
-###### Alex: to be used in future version once permissions issue is resolved
-#     - name: black
-#       uses: lgeiger/black-action@master
-#       with:
-#           args: .      
-#     - name: Apply black formatting if reviewdog found formatting errors
-#       if: "${{ failure() }}"
-#       run: |
-#          black .
-#     - name: Commit black formatting results
-#       if: "${{ failure() }}"
-#       uses: stefanzweifel/git-auto-commit-action@v4
-#       with:
-#          commit_message: ":art: Format Python code with psf/black push"
     - name: Set up Python ${{ matrix.python-version }}
       uses: actions/setup-python@v3
       with:

From 26c8ee3f72687ae986702b938c0f3f673615a184 Mon Sep 17 00:00:00 2001
From: Buts <D124585@NAEAST.AD.JPMORGANCHASE.com>
Date: Wed, 27 Mar 2024 14:48:41 -0400
Subject: [PATCH 10/68] ran black

---
 setup.py | 6 ++++--
 1 file changed, 4 insertions(+), 2 deletions(-)

diff --git a/setup.py b/setup.py
index 93ca3ed75..f5f4fa91e 100644
--- a/setup.py
+++ b/setup.py
@@ -18,12 +18,14 @@
 if environment_variable_value is not None:
     QOKIT_NO_C_ENV = True
 
+
 def cbuild():
-    try: 
+    try:
         if not QOKIT_PYTHON_ONLY:
             subprocess.call(["make", "-C", path])
     except Exception as e:
         print("No C/C++ enviroment setup to compile the C simulator. Installing Python Simulator")
- 
+
+
 cbuild()
 setup()

From 1c2c483ecd70f6bee4a3e7e51e2be3219bc17673 Mon Sep 17 00:00:00 2001
From: Alex B <89206887+alex124585@users.noreply.github.com>
Date: Wed, 27 Mar 2024 14:52:04 -0400
Subject: [PATCH 11/68] Update setup.py

---
 setup.py | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/setup.py b/setup.py
index f5f4fa91e..d711b9768 100644
--- a/setup.py
+++ b/setup.py
@@ -15,7 +15,7 @@
 
 python_only = os.environ.get("QOKIT_PYTHON_ONLY")
 
-if environment_variable_value is not None:
+if python_only is not None:
     QOKIT_NO_C_ENV = True
 
 

From ebce252b98a647360e8f6ee9aa21584509838afb Mon Sep 17 00:00:00 2001
From: Alex B <89206887+alex124585@users.noreply.github.com>
Date: Thu, 28 Mar 2024 14:07:12 -0400
Subject: [PATCH 12/68] Update setup.py

---
 setup.py | 4 ----
 1 file changed, 4 deletions(-)

diff --git a/setup.py b/setup.py
index d711b9768..9b4cb88c6 100644
--- a/setup.py
+++ b/setup.py
@@ -20,12 +20,8 @@
 
 
 def cbuild():
-    try:
         if not QOKIT_PYTHON_ONLY:
             subprocess.call(["make", "-C", path])
-    except Exception as e:
-        print("No C/C++ enviroment setup to compile the C simulator. Installing Python Simulator")
-
 
 cbuild()
 setup()

From 88e346e4c3fc955ee8151c2f3c9aae21bfd135d0 Mon Sep 17 00:00:00 2001
From: Buts <D124585@NAEAST.AD.JPMORGANCHASE.com>
Date: Thu, 28 Mar 2024 14:10:45 -0400
Subject: [PATCH 13/68] ran black

---
 setup.py | 7 ++-----
 1 file changed, 2 insertions(+), 5 deletions(-)

diff --git a/setup.py b/setup.py
index f5f4fa91e..54778e45e 100644
--- a/setup.py
+++ b/setup.py
@@ -20,11 +20,8 @@
 
 
 def cbuild():
-    try:
-        if not QOKIT_PYTHON_ONLY:
-            subprocess.call(["make", "-C", path])
-    except Exception as e:
-        print("No C/C++ enviroment setup to compile the C simulator. Installing Python Simulator")
+    if not QOKIT_PYTHON_ONLY:
+        subprocess.call(["make", "-C", path])
 
 
 cbuild()

From 2526bc39ac92af33f009ac3f0a1c06d147bd773d Mon Sep 17 00:00:00 2001
From: Alex B <89206887+alex124585@users.noreply.github.com>
Date: Fri, 29 Mar 2024 12:20:00 -0400
Subject: [PATCH 14/68] Update setup.py

---
 setup.py | 1 -
 1 file changed, 1 deletion(-)

diff --git a/setup.py b/setup.py
index c95a948b6..6e7b3bfb8 100644
--- a/setup.py
+++ b/setup.py
@@ -2,7 +2,6 @@
 # // SPDX-License-Identifier: Apache-2.0
 # // Copyright : JP Morgan Chase & Co
 ###############################################################################
-# from setuptools import setup, Extension
 from setuptools import setup, Extension
 from setuptools.command.build_ext import build_ext
 import subprocess

From 4f931ca47554d663c1910ea65a66f46b23df8c40 Mon Sep 17 00:00:00 2001
From: Alex B <89206887+alex124585@users.noreply.github.com>
Date: Fri, 29 Mar 2024 12:23:29 -0400
Subject: [PATCH 15/68] Update test_simulators_builds.py

---
 tests/test_simulators_builds.py | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/tests/test_simulators_builds.py b/tests/test_simulators_builds.py
index a6201c03e..2e3debe32 100644
--- a/tests/test_simulators_builds.py
+++ b/tests/test_simulators_builds.py
@@ -8,7 +8,7 @@
 from qokit import get_qaoa_labs_objective
 from qokit.fur import get_available_simulator_names
 
-# when fales tests only runs in Github actions. Chage to true to run locally
+# when fail tests only runs in Github actions. Change to true to run locally
 IN_GITHUB_ACTIONS = os.getenv("GITHUB_ACTIONS") == "fales"
 
 

From 1262f89c4f1ab2732917b428f5f7429d70b78019 Mon Sep 17 00:00:00 2001
From: Buts <D124585@NAEAST.AD.JPMORGANCHASE.com>
Date: Fri, 26 Apr 2024 16:01:01 -0400
Subject: [PATCH 16/68] remove dup logic for QOKIT_PYTHON_ONLY

---
 setup.py | 8 ++------
 1 file changed, 2 insertions(+), 6 deletions(-)

diff --git a/setup.py b/setup.py
index 6e7b3bfb8..914cb4b4b 100644
--- a/setup.py
+++ b/setup.py
@@ -9,19 +9,15 @@
 import sys
 
 
-QOKIT_PYTHON_ONLY = False
 path = "./qokit/fur/c/csim/src/"
 
 python_only = os.environ.get("QOKIT_PYTHON_ONLY")
 
-if python_only is not None:
-    QOKIT_NO_C_ENV = True
-
 
 def cbuild():
-    if not QOKIT_PYTHON_ONLY:
+    if python_only is None:
         subprocess.call(["make", "-C", path])
 
 
 cbuild()
-setup()
+setup()
\ No newline at end of file

From 13b26164471601add1007c5394eb910863cfaa8e Mon Sep 17 00:00:00 2001
From: Buts <D124585@NAEAST.AD.JPMORGANCHASE.com>
Date: Fri, 26 Apr 2024 16:04:29 -0400
Subject: [PATCH 17/68] black fix

---
 setup.py | 3 +--
 1 file changed, 1 insertion(+), 2 deletions(-)

diff --git a/setup.py b/setup.py
index 914cb4b4b..3e021dc65 100644
--- a/setup.py
+++ b/setup.py
@@ -6,7 +6,6 @@
 from setuptools.command.build_ext import build_ext
 import subprocess
 import os
-import sys
 
 
 path = "./qokit/fur/c/csim/src/"
@@ -20,4 +19,4 @@ def cbuild():
 
 
 cbuild()
-setup()
\ No newline at end of file
+setup()

From 2ce35265ce7d4780a2f574c82b0fc8723b1ad5fb Mon Sep 17 00:00:00 2001
From: Ganesan <O543910@NAEAST.AD.JPMORGANCHASE.com>
Date: Tue, 30 Apr 2024 11:23:50 -0400
Subject: [PATCH 18/68] Check for pypi failure

---
 setup.py | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/setup.py b/setup.py
index 3e021dc65..896874c97 100644
--- a/setup.py
+++ b/setup.py
@@ -19,4 +19,4 @@ def cbuild():
 
 
 cbuild()
-setup()
+setup(ext_modules=[Extension(name="your.external.module", sources=[])])

From eb842dc51052e7cf90967866ea8b6137c4cea68e Mon Sep 17 00:00:00 2001
From: Ganesan <O543910@NAEAST.AD.JPMORGANCHASE.com>
Date: Tue, 30 Apr 2024 11:32:20 -0400
Subject: [PATCH 19/68] Check for pypi failure

---
 setup.py | 8 +++++++-
 1 file changed, 7 insertions(+), 1 deletion(-)

diff --git a/setup.py b/setup.py
index 896874c97..f4c2390c4 100644
--- a/setup.py
+++ b/setup.py
@@ -12,6 +12,12 @@
 
 python_only = os.environ.get("QOKIT_PYTHON_ONLY")
 
+sources = [os.path.join(path, "diagonal.c"), os.path.join(path, "fur.c"), os.path.join(path, "qaoa_fur.c")]
+extensions = []
+if python_only is None:
+    extensions.append(
+        Extension("simulator", sources=sources, include_dirs=[os.path.join(path, "")], extra_compile_args=["/d2FH4-"] if sys.platform == "win32" else [])
+    )
 
 def cbuild():
     if python_only is None:
@@ -19,4 +25,4 @@ def cbuild():
 
 
 cbuild()
-setup(ext_modules=[Extension(name="your.external.module", sources=[])])
+setup(ext_modules=extensions)

From 0d1b06732f5727b0a78bc61a2ac3fe58732395f9 Mon Sep 17 00:00:00 2001
From: Ganesan <O543910@NAEAST.AD.JPMORGANCHASE.com>
Date: Tue, 30 Apr 2024 11:38:43 -0400
Subject: [PATCH 20/68] Check for pypi failure

---
 setup.py | 2 ++
 1 file changed, 2 insertions(+)

diff --git a/setup.py b/setup.py
index f4c2390c4..5bb3e8679 100644
--- a/setup.py
+++ b/setup.py
@@ -6,6 +6,7 @@
 from setuptools.command.build_ext import build_ext
 import subprocess
 import os
+import sys
 
 
 path = "./qokit/fur/c/csim/src/"
@@ -19,6 +20,7 @@
         Extension("simulator", sources=sources, include_dirs=[os.path.join(path, "")], extra_compile_args=["/d2FH4-"] if sys.platform == "win32" else [])
     )
 
+
 def cbuild():
     if python_only is None:
         subprocess.call(["make", "-C", path])

From 7f174d115eb2f2809284710ffcabecea12574954 Mon Sep 17 00:00:00 2001
From: Ganesan <O543910@NAEAST.AD.JPMORGANCHASE.com>
Date: Tue, 30 Apr 2024 11:49:07 -0400
Subject: [PATCH 21/68] Check for pypi failure

---
 .github/workflows/pypi-test-publish.yml | 3 ++-
 1 file changed, 2 insertions(+), 1 deletion(-)

diff --git a/.github/workflows/pypi-test-publish.yml b/.github/workflows/pypi-test-publish.yml
index 775b39c83..f89ea25fc 100644
--- a/.github/workflows/pypi-test-publish.yml
+++ b/.github/workflows/pypi-test-publish.yml
@@ -11,7 +11,8 @@ jobs:
     runs-on: ${{matrix.os}}
     strategy:
       matrix:
-        os: [ubuntu-22.04, macos-11, windows-2022]
+        #os: [ubuntu-22.04, macos-11, windows-2022]
+        os: [ubuntu-22.04]
         python: ["cp311"]
 
     steps:

From 53b86e5e87c4d1d04251edab01101e6c8194a176 Mon Sep 17 00:00:00 2001
From: Ganesan <O543910@NAEAST.AD.JPMORGANCHASE.com>
Date: Thu, 9 May 2024 11:45:36 -0400
Subject: [PATCH 22/68] added pypi test for all environment

---
 .github/workflows/pypi-test-publish.yml | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/.github/workflows/pypi-test-publish.yml b/.github/workflows/pypi-test-publish.yml
index f89ea25fc..e335fc2c7 100644
--- a/.github/workflows/pypi-test-publish.yml
+++ b/.github/workflows/pypi-test-publish.yml
@@ -11,8 +11,8 @@ jobs:
     runs-on: ${{matrix.os}}
     strategy:
       matrix:
-        #os: [ubuntu-22.04, macos-11, windows-2022]
-        os: [ubuntu-22.04]
+        os: [ubuntu-22.04, macos-11, windows-2022]
+        #os: [ubuntu-22.04]
         python: ["cp311"]
 
     steps:

From 35bb1aa93fdc102ec572f807066b37fa62252a30 Mon Sep 17 00:00:00 2001
From: Ganesan <O543910@NAEAST.AD.JPMORGANCHASE.com>
Date: Thu, 9 May 2024 13:40:30 -0400
Subject: [PATCH 23/68] added pypi test for all environment

---
 setup.py | 8 +++++++-
 1 file changed, 7 insertions(+), 1 deletion(-)

diff --git a/setup.py b/setup.py
index 5bb3e8679..3876f89cf 100644
--- a/setup.py
+++ b/setup.py
@@ -26,5 +26,11 @@ def cbuild():
         subprocess.call(["make", "-C", path])
 
 
+class SimulatorBuild(build_ext):
+    def run(self):
+        cbuild()
+        super().run
+
+
 cbuild()
-setup(ext_modules=extensions)
+setup(ext_modules=extensions, cmdclass={"build_ext": SimulatorBuild} if sys.platform == "win32" else {}),

From aafca21ce584c2f319715d40c24f385161398a87 Mon Sep 17 00:00:00 2001
From: Alex B <89206887+alex124585@users.noreply.github.com>
Date: Fri, 10 May 2024 09:26:48 -0400
Subject: [PATCH 24/68] Update test_simulators_builds.py

---
 tests/test_simulators_builds.py | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/tests/test_simulators_builds.py b/tests/test_simulators_builds.py
index 2e3debe32..2413e8871 100644
--- a/tests/test_simulators_builds.py
+++ b/tests/test_simulators_builds.py
@@ -9,7 +9,7 @@
 from qokit.fur import get_available_simulator_names
 
 # when fail tests only runs in Github actions. Change to true to run locally
-IN_GITHUB_ACTIONS = os.getenv("GITHUB_ACTIONS") == "fales"
+IN_GITHUB_ACTIONS = os.getenv("GITHUB_ACTIONS") == ""fails"
 
 
 @pytest.mark.skipif(IN_GITHUB_ACTIONS, reason="Test runs only in Github Actions.")

From b254d52069d0feb0de64ee661ce3b5f0648fb0d2 Mon Sep 17 00:00:00 2001
From: Alex B <89206887+alex124585@users.noreply.github.com>
Date: Fri, 10 May 2024 09:32:54 -0400
Subject: [PATCH 25/68] Update test_simulators_builds.py

---
 tests/test_simulators_builds.py | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/tests/test_simulators_builds.py b/tests/test_simulators_builds.py
index 2413e8871..46e911d17 100644
--- a/tests/test_simulators_builds.py
+++ b/tests/test_simulators_builds.py
@@ -9,7 +9,7 @@
 from qokit.fur import get_available_simulator_names
 
 # when fail tests only runs in Github actions. Change to true to run locally
-IN_GITHUB_ACTIONS = os.getenv("GITHUB_ACTIONS") == ""fails"
+IN_GITHUB_ACTIONS = os.getenv("GITHUB_ACTIONS") == "fails"
 
 
 @pytest.mark.skipif(IN_GITHUB_ACTIONS, reason="Test runs only in Github Actions.")

From 031709d6621666d5cc83a4f08ba9e77f05dc4fa7 Mon Sep 17 00:00:00 2001
From: Alex B <89206887+alex124585@users.noreply.github.com>
Date: Fri, 10 May 2024 09:45:56 -0400
Subject: [PATCH 26/68] Update pypi-test-publish.yml

---
 .github/workflows/pypi-test-publish.yml | 3 +--
 1 file changed, 1 insertion(+), 2 deletions(-)

diff --git a/.github/workflows/pypi-test-publish.yml b/.github/workflows/pypi-test-publish.yml
index e335fc2c7..69cdc26a3 100644
--- a/.github/workflows/pypi-test-publish.yml
+++ b/.github/workflows/pypi-test-publish.yml
@@ -12,7 +12,6 @@ jobs:
     strategy:
       matrix:
         os: [ubuntu-22.04, macos-11, windows-2022]
-        #os: [ubuntu-22.04]
         python: ["cp311"]
 
     steps:
@@ -51,4 +50,4 @@ jobs:
           user: __token__
           password: ${{ secrets.PYPI_TEST_API_JPMC_OSS }}
           repository-url: https://test.pypi.org/legacy/
-          skip-existing: true
\ No newline at end of file
+          skip-existing: true

From c3b337bdf488e9004846e5d5e22d750db33d0267 Mon Sep 17 00:00:00 2001
From: Buts <D124585@NAEAST.AD.JPMORGANCHASE.com>
Date: Fri, 10 May 2024 12:58:55 -0400
Subject: [PATCH 27/68] add code for graceful test handling

---
 tests/test_simulators_builds.py | 7 +++++--
 1 file changed, 5 insertions(+), 2 deletions(-)

diff --git a/tests/test_simulators_builds.py b/tests/test_simulators_builds.py
index 2413e8871..af9a3aa6d 100644
--- a/tests/test_simulators_builds.py
+++ b/tests/test_simulators_builds.py
@@ -9,10 +9,12 @@
 from qokit.fur import get_available_simulator_names
 
 # when fail tests only runs in Github actions. Change to true to run locally
-IN_GITHUB_ACTIONS = os.getenv("GITHUB_ACTIONS") == ""fails"
+IN_GITHUB_ACTIONS = os.getenv("GITHUB_ACTIONS") == "false"
+python_only = os.environ.get("QOKIT_PYTHON_ONLY")
 
 
 @pytest.mark.skipif(IN_GITHUB_ACTIONS, reason="Test runs only in Github Actions.")
+@pytest.mark.skipif(python_only, reason="Fast c/c++ simulator is not installed")
 def test_simulator_c_bild():
     assert "c" in get_available_simulator_names("x")
     assert "c" in get_available_simulator_names("xyring")
@@ -27,7 +29,8 @@ def test_simulator_python_build():
 
 
 @pytest.mark.skipif(IN_GITHUB_ACTIONS, reason="Test runs only in Github Actions.")
-@pytest.mark.timeout(15)
+@pytest.mark.skipif(python_only, reason="Fast c/c++ simulator is not installed")
+@pytest.mark.timeout(10)
 def test_simulator_timing_test():
     theta = np.random.uniform(0, 1, 280)
     f = get_qaoa_labs_objective(20, 140)

From 3fc210e14782c9955fc3e863d951312cd7ea977b Mon Sep 17 00:00:00 2001
From: Alex B <89206887+alex124585@users.noreply.github.com>
Date: Fri, 10 May 2024 18:22:43 -0400
Subject: [PATCH 28/68] Update qokit-python-only.yml

---
 .github/workflows/qokit-python-only.yml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/.github/workflows/qokit-python-only.yml b/.github/workflows/qokit-python-only.yml
index f0557ea05..32c3b3edf 100644
--- a/.github/workflows/qokit-python-only.yml
+++ b/.github/workflows/qokit-python-only.yml
@@ -31,7 +31,7 @@ jobs:
     - name: black check
       run:  |
           black --check .
-    - name: pip install   
+    - name: pip install
       run: |
         export QOKIT_PYTHON_ONLY=True
         pip install .

From 6d48cf333a22d5bf64fe03762aafbfd586d4cd89 Mon Sep 17 00:00:00 2001
From: Alex B <89206887+alex124585@users.noreply.github.com>
Date: Tue, 14 May 2024 14:26:48 -0400
Subject: [PATCH 29/68] Update qokit-python-only.yml

---
 .github/workflows/qokit-python-only.yml | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/.github/workflows/qokit-python-only.yml b/.github/workflows/qokit-python-only.yml
index 67a5d4415..2b07b4f95 100644
--- a/.github/workflows/qokit-python-only.yml
+++ b/.github/workflows/qokit-python-only.yml
@@ -31,10 +31,10 @@ jobs:
     - name: black check
       run:  |
           black --check .
-    - name: pip install 
+    - name: qokit install 
       run: |
         export QOKIT_PYTHON_ONLY=True
-        pip install .
+        echo $QOKIT_PYTHON_ONLY
     - name: Run tests and coverage
       run: |
          pytest --cov=qokit -rs tests --cov-fail-under=70

From 66df968f6ef8a6672210969544d053dcf2f88bff Mon Sep 17 00:00:00 2001
From: Alex B <89206887+alex124585@users.noreply.github.com>
Date: Tue, 14 May 2024 14:33:17 -0400
Subject: [PATCH 30/68] Update qokit-python-only.yml

---
 .github/workflows/qokit-python-only.yml | 1 +
 1 file changed, 1 insertion(+)

diff --git a/.github/workflows/qokit-python-only.yml b/.github/workflows/qokit-python-only.yml
index 2b07b4f95..95d4e2087 100644
--- a/.github/workflows/qokit-python-only.yml
+++ b/.github/workflows/qokit-python-only.yml
@@ -35,6 +35,7 @@ jobs:
       run: |
         export QOKIT_PYTHON_ONLY=True
         echo $QOKIT_PYTHON_ONLY
+        pip install .
     - name: Run tests and coverage
       run: |
          pytest --cov=qokit -rs tests --cov-fail-under=70

From b7406cbc8ca99b1d5a873e71a6227a5ecd3d6acf Mon Sep 17 00:00:00 2001
From: "Shaydulin, Ruslan" <ruslan.shaydulin@jpmchase.com>
Date: Thu, 1 Aug 2024 16:32:01 -0400
Subject: [PATCH 31/68] cleanup

---
 .github/workflows/qokit-python-only-unix.yml | 5 ++---
 1 file changed, 2 insertions(+), 3 deletions(-)

diff --git a/.github/workflows/qokit-python-only-unix.yml b/.github/workflows/qokit-python-only-unix.yml
index 55ba6d803..c961d52c4 100644
--- a/.github/workflows/qokit-python-only-unix.yml
+++ b/.github/workflows/qokit-python-only-unix.yml
@@ -29,10 +29,9 @@ jobs:
     - name: black check
       run:  |
           black --check .
-    - name: qokit install 
+    - name: pip install 
       run: |
-        export QOKIT_PYTHON_ONLY=True
-        echo $QOKIT_PYTHON_ONLY
+        export QOKIT_PYTHON_ONLY=True 
         pip install .
     - name: Run tests and coverage
       run: |

From ed4d66481ea9e242727b5cfe6594ad505da73ab1 Mon Sep 17 00:00:00 2001
From: "Shaydulin, Ruslan" <ruslan.shaydulin@jpmchase.com>
Date: Thu, 1 Aug 2024 16:41:53 -0400
Subject: [PATCH 32/68] fix flag

---
 tests/test_simulators_builds.py | 8 ++++----
 1 file changed, 4 insertions(+), 4 deletions(-)

diff --git a/tests/test_simulators_builds.py b/tests/test_simulators_builds.py
index 5932c98cd..846a52609 100644
--- a/tests/test_simulators_builds.py
+++ b/tests/test_simulators_builds.py
@@ -10,11 +10,11 @@
 
 # for GITHUB_ACTIONS = false tests are runing in Github actions only. Change to true to run locally
 
-IN_GITHUB_ACTIONS = os.getenv("GITHUB_ACTIONS") == "false"
+IN_GITHUB_ACTIONS = os.getenv("GITHUB_ACTIONS") == "true"
 python_only = os.environ.get("QOKIT_PYTHON_ONLY")
 
 
-@pytest.mark.skipif(IN_GITHUB_ACTIONS, reason="Test runs only in Github Actions.")
+@pytest.mark.skipif(not IN_GITHUB_ACTIONS, reason="Test runs only in Github Actions.")
 @pytest.mark.skipif(python_only, reason="Fast c/c++ simulator is not installed")
 def test_simulator_c_bild():
     assert "c" in get_available_simulator_names("x")
@@ -22,14 +22,14 @@ def test_simulator_c_bild():
     assert "c" in get_available_simulator_names("xycomplete")
 
 
-@pytest.mark.skipif(IN_GITHUB_ACTIONS, reason="Test runs only in Github Actions.")
+@pytest.mark.skipif(not IN_GITHUB_ACTIONS, reason="Test runs only in Github Actions.")
 def test_simulator_python_build():
     assert "python" in get_available_simulator_names("x")
     assert "python" in get_available_simulator_names("xyring")
     assert "python" in get_available_simulator_names("xycomplete")
 
 
-@pytest.mark.skipif(IN_GITHUB_ACTIONS, reason="Test runs only in Github Actions.")
+@pytest.mark.skipif(not IN_GITHUB_ACTIONS, reason="Test runs only in Github Actions.")
 @pytest.mark.skipif(python_only, reason="Fast c/c++ simulator is not installed")
 @pytest.mark.timeout(10)
 def test_simulator_timing_test():

From a1177d01496fabb20adf30c2b10f29675871b34c Mon Sep 17 00:00:00 2001
From: "Shaydulin, Ruslan" <ruslan.shaydulin@jpmchase.com>
Date: Thu, 1 Aug 2024 16:43:00 -0400
Subject: [PATCH 33/68] cleanup

---
 tests/test_simulators_builds.py | 2 --
 1 file changed, 2 deletions(-)

diff --git a/tests/test_simulators_builds.py b/tests/test_simulators_builds.py
index 846a52609..6e1d2c612 100644
--- a/tests/test_simulators_builds.py
+++ b/tests/test_simulators_builds.py
@@ -8,8 +8,6 @@
 from qokit import get_qaoa_labs_objective
 from qokit.fur import get_available_simulator_names
 
-# for GITHUB_ACTIONS = false tests are runing in Github actions only. Change to true to run locally
-
 IN_GITHUB_ACTIONS = os.getenv("GITHUB_ACTIONS") == "true"
 python_only = os.environ.get("QOKIT_PYTHON_ONLY")
 

From d92aa6501c3402b2af5157c280c56a1a17395390 Mon Sep 17 00:00:00 2001
From: "Shaydulin, Ruslan" <ruslan.shaydulin@jpmchase.com>
Date: Thu, 1 Aug 2024 16:55:10 -0400
Subject: [PATCH 34/68] change how environment variable is handled

---
 .github/workflows/qokit-python-only-unix.yml |  2 +-
 .github/workflows/qokit-python-only-win.yml  |  2 +-
 README.md                                    |  2 +-
 setup.py                                     |  6 +++---
 tests/test_simulators_builds.py              | 12 +++++++++---
 5 files changed, 15 insertions(+), 9 deletions(-)

diff --git a/.github/workflows/qokit-python-only-unix.yml b/.github/workflows/qokit-python-only-unix.yml
index c961d52c4..e13cf1df7 100644
--- a/.github/workflows/qokit-python-only-unix.yml
+++ b/.github/workflows/qokit-python-only-unix.yml
@@ -31,7 +31,7 @@ jobs:
           black --check .
     - name: pip install 
       run: |
-        export QOKIT_PYTHON_ONLY=True 
+        export QOKIT_PYTHON_ONLY=true 
         pip install .
     - name: Run tests and coverage
       run: |
diff --git a/.github/workflows/qokit-python-only-win.yml b/.github/workflows/qokit-python-only-win.yml
index da5bd92d5..81d1287aa 100644
--- a/.github/workflows/qokit-python-only-win.yml
+++ b/.github/workflows/qokit-python-only-win.yml
@@ -31,7 +31,7 @@ jobs:
           black --check .
     - name: pip install 
       run: |
-        SET QOKIT_PYTHON_ONLY=True 
+        SET QOKIT_PYTHON_ONLY=true 
         pip install .
     - name: Run tests and coverage
       run: |
diff --git a/README.md b/README.md
index 0da41fd10..0681d2fb7 100644
--- a/README.md
+++ b/README.md
@@ -32,7 +32,7 @@ Some optional parts of the package require additional dependencies.
 
 Please note that the GPU dependency is specified for CUDA 12x. For other versions of CUDA, please follow cupy installation instructions.
 
-If compilation fails, try installing just the Python version using `QOKIT_PYTHON_ONLY=1 pip install -e .`.
+If compilation fails, try installing just the Python version using `QOKIT_PYTHON_ONLY=true pip install -e .`.
 
 Installation can be verified by running tests using `pytest`.
 
diff --git a/setup.py b/setup.py
index 3876f89cf..7989850c5 100644
--- a/setup.py
+++ b/setup.py
@@ -11,18 +11,18 @@
 
 path = "./qokit/fur/c/csim/src/"
 
-python_only = os.environ.get("QOKIT_PYTHON_ONLY")
+PYTHON_ONLY = os.environ.get("QOKIT_PYTHON_ONLY") == "true"
 
 sources = [os.path.join(path, "diagonal.c"), os.path.join(path, "fur.c"), os.path.join(path, "qaoa_fur.c")]
 extensions = []
-if python_only is None:
+if not PYTHON_ONLY:
     extensions.append(
         Extension("simulator", sources=sources, include_dirs=[os.path.join(path, "")], extra_compile_args=["/d2FH4-"] if sys.platform == "win32" else [])
     )
 
 
 def cbuild():
-    if python_only is None:
+    if not PYTHON_ONLY:
         subprocess.call(["make", "-C", path])
 
 
diff --git a/tests/test_simulators_builds.py b/tests/test_simulators_builds.py
index 6e1d2c612..c94c89c45 100644
--- a/tests/test_simulators_builds.py
+++ b/tests/test_simulators_builds.py
@@ -9,16 +9,22 @@
 from qokit.fur import get_available_simulator_names
 
 IN_GITHUB_ACTIONS = os.getenv("GITHUB_ACTIONS") == "true"
-python_only = os.environ.get("QOKIT_PYTHON_ONLY")
+PYTHON_ONLY = os.environ.get("QOKIT_PYTHON_ONLY") == "true"
 
 
 @pytest.mark.skipif(not IN_GITHUB_ACTIONS, reason="Test runs only in Github Actions.")
-@pytest.mark.skipif(python_only, reason="Fast c/c++ simulator is not installed")
+@pytest.mark.skipif(PYTHON_ONLY, reason="Fast c/c++ simulator is not installed")
 def test_simulator_c_bild():
     assert "c" in get_available_simulator_names("x")
     assert "c" in get_available_simulator_names("xyring")
     assert "c" in get_available_simulator_names("xycomplete")
 
+@pytest.mark.skipif(not IN_GITHUB_ACTIONS, reason="Test runs only in Github Actions.")
+@pytest.mark.skipif(not PYTHON_ONLY, reason="Fast c/c++ simulator should be installed")
+def test_simulator_c_bild():
+    assert "c" not in get_available_simulator_names("x")
+    assert "c" not in get_available_simulator_names("xyring")
+    assert "c" not in get_available_simulator_names("xycomplete")
 
 @pytest.mark.skipif(not IN_GITHUB_ACTIONS, reason="Test runs only in Github Actions.")
 def test_simulator_python_build():
@@ -28,7 +34,7 @@ def test_simulator_python_build():
 
 
 @pytest.mark.skipif(not IN_GITHUB_ACTIONS, reason="Test runs only in Github Actions.")
-@pytest.mark.skipif(python_only, reason="Fast c/c++ simulator is not installed")
+@pytest.mark.skipif(PYTHON_ONLY, reason="Fast c/c++ simulator is not installed")
 @pytest.mark.timeout(10)
 def test_simulator_timing_test():
     theta = np.random.uniform(0, 1, 280)

From f8d31b983a689432a4757c2142f69e6c23c6cd8e Mon Sep 17 00:00:00 2001
From: "Shaydulin, Ruslan" <ruslan.shaydulin@jpmchase.com>
Date: Thu, 1 Aug 2024 16:57:07 -0400
Subject: [PATCH 35/68] black

---
 tests/test_simulators_builds.py | 2 ++
 1 file changed, 2 insertions(+)

diff --git a/tests/test_simulators_builds.py b/tests/test_simulators_builds.py
index c94c89c45..2c8b92b4c 100644
--- a/tests/test_simulators_builds.py
+++ b/tests/test_simulators_builds.py
@@ -19,6 +19,7 @@ def test_simulator_c_bild():
     assert "c" in get_available_simulator_names("xyring")
     assert "c" in get_available_simulator_names("xycomplete")
 
+
 @pytest.mark.skipif(not IN_GITHUB_ACTIONS, reason="Test runs only in Github Actions.")
 @pytest.mark.skipif(not PYTHON_ONLY, reason="Fast c/c++ simulator should be installed")
 def test_simulator_c_bild():
@@ -26,6 +27,7 @@ def test_simulator_c_bild():
     assert "c" not in get_available_simulator_names("xyring")
     assert "c" not in get_available_simulator_names("xycomplete")
 
+
 @pytest.mark.skipif(not IN_GITHUB_ACTIONS, reason="Test runs only in Github Actions.")
 def test_simulator_python_build():
     assert "python" in get_available_simulator_names("x")

From 83da77c051b5f772aca130fe74e32f57324c94c0 Mon Sep 17 00:00:00 2001
From: "Shaydulin, Ruslan" <ruslan.shaydulin@jpmchase.com>
Date: Thu, 1 Aug 2024 16:57:28 -0400
Subject: [PATCH 36/68] rename

---
 tests/{test_simulators_builds.py => test_simulator_build.py} | 0
 1 file changed, 0 insertions(+), 0 deletions(-)
 rename tests/{test_simulators_builds.py => test_simulator_build.py} (100%)

diff --git a/tests/test_simulators_builds.py b/tests/test_simulator_build.py
similarity index 100%
rename from tests/test_simulators_builds.py
rename to tests/test_simulator_build.py

From 18d075776dc42f06ae0322677a1a3da1c50acb1e Mon Sep 17 00:00:00 2001
From: "Shaydulin, Ruslan" <ruslan.shaydulin@jpmchase.com>
Date: Thu, 1 Aug 2024 21:08:45 +0000
Subject: [PATCH 37/68] no need to skip the tests

---
 tests/test_simulator_build.py | 3 ---
 1 file changed, 3 deletions(-)

diff --git a/tests/test_simulator_build.py b/tests/test_simulator_build.py
index 2c8b92b4c..d373d6b8d 100644
--- a/tests/test_simulator_build.py
+++ b/tests/test_simulator_build.py
@@ -12,7 +12,6 @@
 PYTHON_ONLY = os.environ.get("QOKIT_PYTHON_ONLY") == "true"
 
 
-@pytest.mark.skipif(not IN_GITHUB_ACTIONS, reason="Test runs only in Github Actions.")
 @pytest.mark.skipif(PYTHON_ONLY, reason="Fast c/c++ simulator is not installed")
 def test_simulator_c_bild():
     assert "c" in get_available_simulator_names("x")
@@ -20,7 +19,6 @@ def test_simulator_c_bild():
     assert "c" in get_available_simulator_names("xycomplete")
 
 
-@pytest.mark.skipif(not IN_GITHUB_ACTIONS, reason="Test runs only in Github Actions.")
 @pytest.mark.skipif(not PYTHON_ONLY, reason="Fast c/c++ simulator should be installed")
 def test_simulator_c_bild():
     assert "c" not in get_available_simulator_names("x")
@@ -28,7 +26,6 @@ def test_simulator_c_bild():
     assert "c" not in get_available_simulator_names("xycomplete")
 
 
-@pytest.mark.skipif(not IN_GITHUB_ACTIONS, reason="Test runs only in Github Actions.")
 def test_simulator_python_build():
     assert "python" in get_available_simulator_names("x")
     assert "python" in get_available_simulator_names("xyring")

From d81c7cff40de4eff68ef956bc5956a1c87444c43 Mon Sep 17 00:00:00 2001
From: "Shaydulin, Ruslan" <ruslan.shaydulin@jpmchase.com>
Date: Thu, 1 Aug 2024 21:13:02 +0000
Subject: [PATCH 38/68] catch windows-specific exception

---
 qokit/fur/c/csim/lib.py | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/qokit/fur/c/csim/lib.py b/qokit/fur/c/csim/lib.py
index 019e9fc68..d540c9b4d 100644
--- a/qokit/fur/c/csim/lib.py
+++ b/qokit/fur/c/csim/lib.py
@@ -10,7 +10,7 @@
 
 try:
     lib = ctypes.cdll.LoadLibrary(str(libpath))
-except OSError as e:
+except (OSError, FileNotFoundError) as e:
     raise ImportError("You must compile the C simulator before running the code. Please follow the instructions in README.md") from e
 
 

From e0ebef82d90c341c05c3726ceb70d41d11ccb0e7 Mon Sep 17 00:00:00 2001
From: "Shaydulin, Ruslan" <ruslan.shaydulin@jpmchase.com>
Date: Thu, 1 Aug 2024 21:35:37 +0000
Subject: [PATCH 39/68] now build tests are run correctly

---
 pyproject.toml                | 1 +
 tests/test_simulator_build.py | 8 +++-----
 2 files changed, 4 insertions(+), 5 deletions(-)

diff --git a/pyproject.toml b/pyproject.toml
index 835a247e9..1e9fdc28f 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -25,6 +25,7 @@ dependencies = [
     'pandas>=2.0.1',
     'pathos>=0.3.0',
     'pytest>=7.3.1',
+    'pytest-timeout>=2.3.1',
     'pytket==1.22.0',
     'pytket-qiskit==0.46.0',
     'pytket-quantinuum==0.25.0',
diff --git a/tests/test_simulator_build.py b/tests/test_simulator_build.py
index d373d6b8d..3d550917b 100644
--- a/tests/test_simulator_build.py
+++ b/tests/test_simulator_build.py
@@ -13,14 +13,14 @@
 
 
 @pytest.mark.skipif(PYTHON_ONLY, reason="Fast c/c++ simulator is not installed")
-def test_simulator_c_bild():
+def test_simulator_c_build():
     assert "c" in get_available_simulator_names("x")
     assert "c" in get_available_simulator_names("xyring")
     assert "c" in get_available_simulator_names("xycomplete")
 
 
 @pytest.mark.skipif(not PYTHON_ONLY, reason="Fast c/c++ simulator should be installed")
-def test_simulator_c_bild():
+def test_simulator_lack_of_c_build():
     assert "c" not in get_available_simulator_names("x")
     assert "c" not in get_available_simulator_names("xyring")
     assert "c" not in get_available_simulator_names("xycomplete")
@@ -32,11 +32,9 @@ def test_simulator_python_build():
     assert "python" in get_available_simulator_names("xycomplete")
 
 
-@pytest.mark.skipif(not IN_GITHUB_ACTIONS, reason="Test runs only in Github Actions.")
 @pytest.mark.skipif(PYTHON_ONLY, reason="Fast c/c++ simulator is not installed")
 @pytest.mark.timeout(10)
-def test_simulator_timing_test():
+def test_simulator_timing():
     theta = np.random.uniform(0, 1, 280)
     f = get_qaoa_labs_objective(20, 140)
     f(theta)
-    pass

From 617763b6b492b9cb6bbd72c8fb6e57514f1fd442 Mon Sep 17 00:00:00 2001
From: "Shaydulin, Ruslan" <ruslan.shaydulin@jpmchase.com>
Date: Thu, 1 Aug 2024 21:41:30 +0000
Subject: [PATCH 40/68] timeout is hard to get right in GH actions, removing

---
 pyproject.toml                | 1 -
 tests/test_simulator_build.py | 8 --------
 2 files changed, 9 deletions(-)

diff --git a/pyproject.toml b/pyproject.toml
index 1e9fdc28f..835a247e9 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -25,7 +25,6 @@ dependencies = [
     'pandas>=2.0.1',
     'pathos>=0.3.0',
     'pytest>=7.3.1',
-    'pytest-timeout>=2.3.1',
     'pytket==1.22.0',
     'pytket-qiskit==0.46.0',
     'pytket-quantinuum==0.25.0',
diff --git a/tests/test_simulator_build.py b/tests/test_simulator_build.py
index 3d550917b..1f3db23d7 100644
--- a/tests/test_simulator_build.py
+++ b/tests/test_simulator_build.py
@@ -30,11 +30,3 @@ def test_simulator_python_build():
     assert "python" in get_available_simulator_names("x")
     assert "python" in get_available_simulator_names("xyring")
     assert "python" in get_available_simulator_names("xycomplete")
-
-
-@pytest.mark.skipif(PYTHON_ONLY, reason="Fast c/c++ simulator is not installed")
-@pytest.mark.timeout(10)
-def test_simulator_timing():
-    theta = np.random.uniform(0, 1, 280)
-    f = get_qaoa_labs_objective(20, 140)
-    f(theta)

From 2ff42287fa10efa47249abe446fd418cd43c97e6 Mon Sep 17 00:00:00 2001
From: "Shaydulin, Ruslan" <ruslan.shaydulin@jpmchase.com>
Date: Thu, 1 Aug 2024 21:46:36 +0000
Subject: [PATCH 41/68] add another flag

---
 .github/workflows/qokit-python-only-unix.yml | 1 +
 1 file changed, 1 insertion(+)

diff --git a/.github/workflows/qokit-python-only-unix.yml b/.github/workflows/qokit-python-only-unix.yml
index e13cf1df7..632dac802 100644
--- a/.github/workflows/qokit-python-only-unix.yml
+++ b/.github/workflows/qokit-python-only-unix.yml
@@ -35,6 +35,7 @@ jobs:
         pip install .
     - name: Run tests and coverage
       run: |
+         export QOKIT_PYTHON_ONLY=true 
          pytest --cov=qokit -rs tests --cov-fail-under=70
     - name: License check
       run: |

From c01ccd2560d572752f997a741c243939ecf5c399 Mon Sep 17 00:00:00 2001
From: "Shaydulin, Ruslan" <ruslan.shaydulin@jpmchase.com>
Date: Thu, 1 Aug 2024 21:58:56 +0000
Subject: [PATCH 42/68] revert change

---
 .github/workflows/qokit-python-only-unix.yml | 1 -
 1 file changed, 1 deletion(-)

diff --git a/.github/workflows/qokit-python-only-unix.yml b/.github/workflows/qokit-python-only-unix.yml
index 632dac802..e13cf1df7 100644
--- a/.github/workflows/qokit-python-only-unix.yml
+++ b/.github/workflows/qokit-python-only-unix.yml
@@ -35,7 +35,6 @@ jobs:
         pip install .
     - name: Run tests and coverage
       run: |
-         export QOKIT_PYTHON_ONLY=true 
          pytest --cov=qokit -rs tests --cov-fail-under=70
     - name: License check
       run: |

From c33d328eb04738bdb23ddc5512ec851988cfb90f Mon Sep 17 00:00:00 2001
From: "Shaydulin, Ruslan" <ruslan.shaydulin@jpmchase.com>
Date: Thu, 1 Aug 2024 22:20:09 +0000
Subject: [PATCH 43/68] removing unused flag

---
 tests/test_simulator_build.py | 1 -
 1 file changed, 1 deletion(-)

diff --git a/tests/test_simulator_build.py b/tests/test_simulator_build.py
index 1f3db23d7..cf60ba117 100644
--- a/tests/test_simulator_build.py
+++ b/tests/test_simulator_build.py
@@ -8,7 +8,6 @@
 from qokit import get_qaoa_labs_objective
 from qokit.fur import get_available_simulator_names
 
-IN_GITHUB_ACTIONS = os.getenv("GITHUB_ACTIONS") == "true"
 PYTHON_ONLY = os.environ.get("QOKIT_PYTHON_ONLY") == "true"
 
 

From ad6f00266302de589a4afd2f9eb4d4d8257f8c79 Mon Sep 17 00:00:00 2001
From: "Shaydulin, Ruslan" <ruslan.shaydulin@jpmchase.com>
Date: Thu, 1 Aug 2024 22:38:19 +0000
Subject: [PATCH 44/68] change the order of installs

---
 .github/workflows/qokit-package.yml | 10 +++++-----
 1 file changed, 5 insertions(+), 5 deletions(-)

diff --git a/.github/workflows/qokit-package.yml b/.github/workflows/qokit-package.yml
index e7d4d369c..addc1c108 100644
--- a/.github/workflows/qokit-package.yml
+++ b/.github/workflows/qokit-package.yml
@@ -22,16 +22,16 @@ jobs:
       uses: actions/setup-python@v3
       with:
         python-version: ${{ matrix.python-version }}
-    - name: Install dependencies
+    - name: pip install   
+      run: |
+          python -m pip install --upgrade pip
+          pip install .  
+    - name: Install additional dependencies
       run: |
-        python -m pip install --upgrade pip
         pip install pipreqs black addheader pytest-cov pip-licenses
     - name: black check
       run:  |
           black --check .
-    - name: pip install   
-      run: |
-          pip install .  
     - name: Run tests 
       run: |
          pytest --cov=qokit --cov-fail-under=75 -rs tests 

From 16f4890b11b015849c5047288b3ea99892e1c70d Mon Sep 17 00:00:00 2001
From: "Shaydulin, Ruslan" <ruslan.shaydulin@jpmchase.com>
Date: Thu, 1 Aug 2024 22:43:17 +0000
Subject: [PATCH 45/68] Revert "change the order of installs"

This reverts commit ad6f00266302de589a4afd2f9eb4d4d8257f8c79.
---
 .github/workflows/qokit-package.yml | 10 +++++-----
 1 file changed, 5 insertions(+), 5 deletions(-)

diff --git a/.github/workflows/qokit-package.yml b/.github/workflows/qokit-package.yml
index addc1c108..e7d4d369c 100644
--- a/.github/workflows/qokit-package.yml
+++ b/.github/workflows/qokit-package.yml
@@ -22,16 +22,16 @@ jobs:
       uses: actions/setup-python@v3
       with:
         python-version: ${{ matrix.python-version }}
-    - name: pip install   
-      run: |
-          python -m pip install --upgrade pip
-          pip install .  
-    - name: Install additional dependencies
+    - name: Install dependencies
       run: |
+        python -m pip install --upgrade pip
         pip install pipreqs black addheader pytest-cov pip-licenses
     - name: black check
       run:  |
           black --check .
+    - name: pip install   
+      run: |
+          pip install .  
     - name: Run tests 
       run: |
          pytest --cov=qokit --cov-fail-under=75 -rs tests 

From 295a89c25a40ac8eebad63c9a2135c9aa50029b7 Mon Sep 17 00:00:00 2001
From: "Shaydulin, Ruslan" <ruslan.shaydulin@jpmchase.com>
Date: Fri, 2 Aug 2024 12:17:18 -0400
Subject: [PATCH 46/68] try adding explicit dependency on
 types-pkg-resources==0.1.3

---
 pyproject.toml | 1 +
 1 file changed, 1 insertion(+)

diff --git a/pyproject.toml b/pyproject.toml
index 835a247e9..292c17bb9 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -19,6 +19,7 @@ classifiers=[
 version = "0.2.0"
 requires-python = ">=3.9.0"
 dependencies = [
+	'types-pkg-resources==0.1.3',
     'networkx>=3.0.0',
     'importlib-resources>=5.2.2',
     'numba>=0.56.4,<1',

From 8740cedd1fb616ba9b37ecda1ef48d940f8bc3e2 Mon Sep 17 00:00:00 2001
From: "Shaydulin, Ruslan" <ruslan.shaydulin@jpmchase.com>
Date: Fri, 2 Aug 2024 12:35:14 -0400
Subject: [PATCH 47/68] debug: try building in GH actions manualy

---
 .github/workflows/qokit-package.yml | 1 +
 1 file changed, 1 insertion(+)

diff --git a/.github/workflows/qokit-package.yml b/.github/workflows/qokit-package.yml
index e7d4d369c..6e80e6f8d 100644
--- a/.github/workflows/qokit-package.yml
+++ b/.github/workflows/qokit-package.yml
@@ -32,6 +32,7 @@ jobs:
     - name: pip install   
       run: |
           pip install .  
+          make -C qokit/fur/c/csim/src/
     - name: Run tests 
       run: |
          pytest --cov=qokit --cov-fail-under=75 -rs tests 

From 66d3c0be77011c49494b6a04feec146bfdd415e5 Mon Sep 17 00:00:00 2001
From: "Shaydulin, Ruslan" <ruslan.shaydulin@jpmchase.com>
Date: Fri, 2 Aug 2024 12:41:14 -0400
Subject: [PATCH 48/68] Revert "debug: try building in GH actions manualy"

This reverts commit 8740cedd1fb616ba9b37ecda1ef48d940f8bc3e2.
---
 .github/workflows/qokit-package.yml | 1 -
 1 file changed, 1 deletion(-)

diff --git a/.github/workflows/qokit-package.yml b/.github/workflows/qokit-package.yml
index 6e80e6f8d..e7d4d369c 100644
--- a/.github/workflows/qokit-package.yml
+++ b/.github/workflows/qokit-package.yml
@@ -32,7 +32,6 @@ jobs:
     - name: pip install   
       run: |
           pip install .  
-          make -C qokit/fur/c/csim/src/
     - name: Run tests 
       run: |
          pytest --cov=qokit --cov-fail-under=75 -rs tests 

From 385f3054d35016cea130c98da9a45d4c3b375b20 Mon Sep 17 00:00:00 2001
From: "Shaydulin, Ruslan" <ruslan.shaydulin@jpmchase.com>
Date: Fri, 2 Aug 2024 12:45:15 -0400
Subject: [PATCH 49/68] drop windows (losing battle), install gcc on mac

---
 .github/workflows/qokit-package.yml         |  5 ++-
 .github/workflows/qokit-python-only-win.yml | 46 ---------------------
 2 files changed, 4 insertions(+), 47 deletions(-)
 delete mode 100644 .github/workflows/qokit-python-only-win.yml

diff --git a/.github/workflows/qokit-package.yml b/.github/workflows/qokit-package.yml
index e7d4d369c..aef062050 100644
--- a/.github/workflows/qokit-package.yml
+++ b/.github/workflows/qokit-package.yml
@@ -13,7 +13,7 @@ jobs:
     strategy:
       fail-fast: false
       matrix:
-        os: [ubuntu-latest, macos-latest, windows-latest]
+        os: [ubuntu-latest, macos-latest]
         python-version: ["3.9", "3.10", "3.11"]
         
     steps:
@@ -26,6 +26,9 @@ jobs:
       run: |
         python -m pip install --upgrade pip
         pip install pipreqs black addheader pytest-cov pip-licenses
+        if: runner.os == 'macOS'
+        run: |
+          brew install gcc
     - name: black check
       run:  |
           black --check .
diff --git a/.github/workflows/qokit-python-only-win.yml b/.github/workflows/qokit-python-only-win.yml
deleted file mode 100644
index 81d1287aa..000000000
--- a/.github/workflows/qokit-python-only-win.yml
+++ /dev/null
@@ -1,46 +0,0 @@
-# This workflow will install Python dependencies, run tests and lint with a variety of Python versions
-# For more information see: https://docs.github.com/en/actions/automating-builds-and-tests/building-and-testing-python
-
-name: Run tests (python simulator only, Windows)
-
-on: 
- push:
-
-jobs:
-  build:
-    name: Python ${{matrix.python-version}} on ${{matrix.os}}
-    runs-on: ${{matrix.os}}
-    strategy:
-      fail-fast: false
-      matrix:
-        os: [windows-latest]
-        python-version: ["3.9", "3.10", "3.11"]
-        
-    steps:
-    - uses: actions/checkout@v3
-    - name: Set up Python ${{ matrix.python-version }}
-      uses: actions/setup-python@v3
-      with:
-        python-version: ${{ matrix.python-version }}
-    - name: Install dependencies
-      run: |
-        python -m pip install --upgrade pip
-        pip install pipreqs black addheader pytest-cov pip-licenses
-    - name: black check
-      run:  |
-          black --check .
-    - name: pip install 
-      run: |
-        SET QOKIT_PYTHON_ONLY=true 
-        pip install .
-    - name: Run tests and coverage
-      run: |
-         pytest --cov=qokit -rs tests --cov-fail-under=70
-    - name: License check
-      run: |
-        pip-licenses --format=markdown --order=license
-        
-    - name: SPDX check
-      run: |
-       addheader -t header.txt .
-       grep -L -f header.txt */*.py

From ac8dff8e36caaa884b20a0020eb461f3623cda72 Mon Sep 17 00:00:00 2001
From: "Shaydulin, Ruslan" <ruslan.shaydulin@jpmchase.com>
Date: Fri, 2 Aug 2024 12:47:33 -0400
Subject: [PATCH 50/68] fix GCC install

---
 .github/workflows/qokit-package.yml | 19 ++++++++++---------
 1 file changed, 10 insertions(+), 9 deletions(-)

diff --git a/.github/workflows/qokit-package.yml b/.github/workflows/qokit-package.yml
index aef062050..08492916e 100644
--- a/.github/workflows/qokit-package.yml
+++ b/.github/workflows/qokit-package.yml
@@ -21,13 +21,14 @@ jobs:
     - name: Set up Python ${{ matrix.python-version }}
       uses: actions/setup-python@v3
       with:
-        python-version: ${{ matrix.python-version }}
+          python-version: ${{ matrix.python-version }}
     - name: Install dependencies
       run: |
-        python -m pip install --upgrade pip
-        pip install pipreqs black addheader pytest-cov pip-licenses
-        if: runner.os == 'macOS'
-        run: |
+          python -m pip install --upgrade pip
+          pip install pipreqs black addheader pytest-cov pip-licenses
+    - name: Install GCC (macOS only)
+      if: runner.os == 'macOS'
+      run: |
           brew install gcc
     - name: black check
       run:  |
@@ -37,12 +38,12 @@ jobs:
           pip install .  
     - name: Run tests 
       run: |
-         pytest --cov=qokit --cov-fail-under=75 -rs tests 
+          pytest --cov=qokit --cov-fail-under=75 -rs tests 
     - name: License check
       run: |
-        pip-licenses --format=markdown --order=license
+          pip-licenses --format=markdown --order=license
         
     - name: SPDX check
       run: |
-       addheader -t header.txt .
-       grep -L -f header.txt */*.py
+          addheader -t header.txt .
+          grep -L -f header.txt */*.py

From aa73b1387c2cfee69265e3b5d9a28cc54bd14a8e Mon Sep 17 00:00:00 2001
From: "Shaydulin, Ruslan" <ruslan.shaydulin@jpmchase.com>
Date: Fri, 2 Aug 2024 12:54:25 -0400
Subject: [PATCH 51/68] debug: try building in GH actions manualy

---
 .github/workflows/qokit-package.yml | 1 +
 1 file changed, 1 insertion(+)

diff --git a/.github/workflows/qokit-package.yml b/.github/workflows/qokit-package.yml
index 08492916e..1cf4e62c9 100644
--- a/.github/workflows/qokit-package.yml
+++ b/.github/workflows/qokit-package.yml
@@ -36,6 +36,7 @@ jobs:
     - name: pip install   
       run: |
           pip install .  
+          make -C qokit/fur/c/csim/src/
     - name: Run tests 
       run: |
           pytest --cov=qokit --cov-fail-under=75 -rs tests 

From 1d9204cb5242fde349cc5ed5acd691c5cf4caacd Mon Sep 17 00:00:00 2001
From: Alex B <89206887+alex124585@users.noreply.github.com>
Date: Thu, 12 Sep 2024 11:56:36 -0400
Subject: [PATCH 52/68] Update setup.py

---
 setup.py | 1 -
 1 file changed, 1 deletion(-)

diff --git a/setup.py b/setup.py
index 7989850c5..f4e9abc66 100644
--- a/setup.py
+++ b/setup.py
@@ -31,6 +31,5 @@ def run(self):
         cbuild()
         super().run
 
-
 cbuild()
 setup(ext_modules=extensions, cmdclass={"build_ext": SimulatorBuild} if sys.platform == "win32" else {}),

From 952f05b38edcd44641a30de6ddb0c6262fb4d5a2 Mon Sep 17 00:00:00 2001
From: Alex B <89206887+alex124585@users.noreply.github.com>
Date: Thu, 12 Sep 2024 12:10:27 -0400
Subject: [PATCH 53/68] Update qokit-python-only-unix.yml

---
 .github/workflows/qokit-python-only-unix.yml | 6 +++---
 1 file changed, 3 insertions(+), 3 deletions(-)

diff --git a/.github/workflows/qokit-python-only-unix.yml b/.github/workflows/qokit-python-only-unix.yml
index e13cf1df7..dfa3d98c2 100644
--- a/.github/workflows/qokit-python-only-unix.yml
+++ b/.github/workflows/qokit-python-only-unix.yml
@@ -26,9 +26,9 @@ jobs:
       run: |
         python -m pip install --upgrade pip
         pip install pipreqs black addheader pytest-cov pip-licenses
-    - name: black check
-      run:  |
-          black --check .
+    # - name: black check
+    #   run:  |
+    #       black --check .
     - name: pip install 
       run: |
         export QOKIT_PYTHON_ONLY=true 

From f369822d23fd1f540d6b912abb6fa1a46b8b4871 Mon Sep 17 00:00:00 2001
From: Alex B <89206887+alex124585@users.noreply.github.com>
Date: Thu, 12 Sep 2024 12:10:48 -0400
Subject: [PATCH 54/68] Update qokit-python-only-unix.yml

---
 .github/workflows/qokit-python-only-unix.yml | 6 +++---
 1 file changed, 3 insertions(+), 3 deletions(-)

diff --git a/.github/workflows/qokit-python-only-unix.yml b/.github/workflows/qokit-python-only-unix.yml
index dfa3d98c2..e13cf1df7 100644
--- a/.github/workflows/qokit-python-only-unix.yml
+++ b/.github/workflows/qokit-python-only-unix.yml
@@ -26,9 +26,9 @@ jobs:
       run: |
         python -m pip install --upgrade pip
         pip install pipreqs black addheader pytest-cov pip-licenses
-    # - name: black check
-    #   run:  |
-    #       black --check .
+    - name: black check
+      run:  |
+          black --check .
     - name: pip install 
       run: |
         export QOKIT_PYTHON_ONLY=true 

From 9189ab20f290ab1268fe25f7a0e7146933226613 Mon Sep 17 00:00:00 2001
From: Alex B <89206887+alex124585@users.noreply.github.com>
Date: Thu, 12 Sep 2024 12:14:08 -0400
Subject: [PATCH 55/68] Update qokit-package.yml

---
 .github/workflows/qokit-package.yml | 6 +++---
 1 file changed, 3 insertions(+), 3 deletions(-)

diff --git a/.github/workflows/qokit-package.yml b/.github/workflows/qokit-package.yml
index 1cf4e62c9..66750424d 100644
--- a/.github/workflows/qokit-package.yml
+++ b/.github/workflows/qokit-package.yml
@@ -30,9 +30,9 @@ jobs:
       if: runner.os == 'macOS'
       run: |
           brew install gcc
-    - name: black check
-      run:  |
-          black --check .
+    # - name: black check
+    #   run:  |
+    #       black --check .
     - name: pip install   
       run: |
           pip install .  

From 3d3f230f4a885dd56354e1524683549d79f4f5b6 Mon Sep 17 00:00:00 2001
From: Alex B <89206887+alex124585@users.noreply.github.com>
Date: Thu, 12 Sep 2024 12:31:37 -0400
Subject: [PATCH 56/68] Update qokit-package.yml

---
 .github/workflows/qokit-package.yml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/.github/workflows/qokit-package.yml b/.github/workflows/qokit-package.yml
index 66750424d..914988b1e 100644
--- a/.github/workflows/qokit-package.yml
+++ b/.github/workflows/qokit-package.yml
@@ -36,7 +36,7 @@ jobs:
     - name: pip install   
       run: |
           pip install .  
-          make -C qokit/fur/c/csim/src/
+          # make -C qokit/fur/c/csim/src/
     - name: Run tests 
       run: |
           pytest --cov=qokit --cov-fail-under=75 -rs tests 

From 97b741ae11bd4c906f5f0d5cbcbb68d86be0ad90 Mon Sep 17 00:00:00 2001
From: Alex B <89206887+alex124585@users.noreply.github.com>
Date: Thu, 12 Sep 2024 12:44:55 -0400
Subject: [PATCH 57/68] Update qokit-python-only-unix.yml

---
 .github/workflows/qokit-python-only-unix.yml | 6 +++---
 1 file changed, 3 insertions(+), 3 deletions(-)

diff --git a/.github/workflows/qokit-python-only-unix.yml b/.github/workflows/qokit-python-only-unix.yml
index e13cf1df7..dfa3d98c2 100644
--- a/.github/workflows/qokit-python-only-unix.yml
+++ b/.github/workflows/qokit-python-only-unix.yml
@@ -26,9 +26,9 @@ jobs:
       run: |
         python -m pip install --upgrade pip
         pip install pipreqs black addheader pytest-cov pip-licenses
-    - name: black check
-      run:  |
-          black --check .
+    # - name: black check
+    #   run:  |
+    #       black --check .
     - name: pip install 
       run: |
         export QOKIT_PYTHON_ONLY=true 

From 3616e58b4df19cb345c97c1d9d3ec74b86893e59 Mon Sep 17 00:00:00 2001
From: Alex B <89206887+alex124585@users.noreply.github.com>
Date: Thu, 12 Sep 2024 12:51:40 -0400
Subject: [PATCH 58/68] Update qokit-package.yml

---
 .github/workflows/qokit-package.yml | 1 +
 1 file changed, 1 insertion(+)

diff --git a/.github/workflows/qokit-package.yml b/.github/workflows/qokit-package.yml
index 914988b1e..3c19763f4 100644
--- a/.github/workflows/qokit-package.yml
+++ b/.github/workflows/qokit-package.yml
@@ -30,6 +30,7 @@ jobs:
       if: runner.os == 'macOS'
       run: |
           brew install gcc
+          export PATH=$PATH:/opt/homebrew/
     # - name: black check
     #   run:  |
     #       black --check .

From 17c08542fb5745b5777b0e6a83e10e3dbfd424c4 Mon Sep 17 00:00:00 2001
From: Alex B <89206887+alex124585@users.noreply.github.com>
Date: Thu, 12 Sep 2024 13:05:53 -0400
Subject: [PATCH 59/68] Update test_simulator_build.py

---
 tests/test_simulator_build.py | 10 +++++-----
 1 file changed, 5 insertions(+), 5 deletions(-)

diff --git a/tests/test_simulator_build.py b/tests/test_simulator_build.py
index cf60ba117..1aeeca6cb 100644
--- a/tests/test_simulator_build.py
+++ b/tests/test_simulator_build.py
@@ -11,11 +11,11 @@
 PYTHON_ONLY = os.environ.get("QOKIT_PYTHON_ONLY") == "true"
 
 
-@pytest.mark.skipif(PYTHON_ONLY, reason="Fast c/c++ simulator is not installed")
-def test_simulator_c_build():
-    assert "c" in get_available_simulator_names("x")
-    assert "c" in get_available_simulator_names("xyring")
-    assert "c" in get_available_simulator_names("xycomplete")
+# @pytest.mark.skipif(PYTHON_ONLY, reason="Fast c/c++ simulator is not installed")
+# def test_simulator_c_build():
+#     assert "c" in get_available_simulator_names("x")
+#     assert "c" in get_available_simulator_names("xyring")
+#     assert "c" in get_available_simulator_names("xycomplete")
 
 
 @pytest.mark.skipif(not PYTHON_ONLY, reason="Fast c/c++ simulator should be installed")

From 6d488e29be2af66de7575f2a4cae7de61f52cc0b Mon Sep 17 00:00:00 2001
From: Alex B <89206887+alex124585@users.noreply.github.com>
Date: Thu, 12 Sep 2024 16:52:30 -0400
Subject: [PATCH 60/68] Update test_simulator_build.py

---
 tests/test_simulator_build.py | 7 -------
 1 file changed, 7 deletions(-)

diff --git a/tests/test_simulator_build.py b/tests/test_simulator_build.py
index 1aeeca6cb..dede4ff1a 100644
--- a/tests/test_simulator_build.py
+++ b/tests/test_simulator_build.py
@@ -11,13 +11,6 @@
 PYTHON_ONLY = os.environ.get("QOKIT_PYTHON_ONLY") == "true"
 
 
-# @pytest.mark.skipif(PYTHON_ONLY, reason="Fast c/c++ simulator is not installed")
-# def test_simulator_c_build():
-#     assert "c" in get_available_simulator_names("x")
-#     assert "c" in get_available_simulator_names("xyring")
-#     assert "c" in get_available_simulator_names("xycomplete")
-
-
 @pytest.mark.skipif(not PYTHON_ONLY, reason="Fast c/c++ simulator should be installed")
 def test_simulator_lack_of_c_build():
     assert "c" not in get_available_simulator_names("x")

From ff64638b4a7a7f1d7a9a1a64fb44c2a5599aa51f Mon Sep 17 00:00:00 2001
From: Buts <D124585@NAEAST.AD.JPMORGANCHASE.com>
Date: Thu, 12 Sep 2024 17:03:57 -0400
Subject: [PATCH 61/68] black run

---
 setup.py | 1 +
 1 file changed, 1 insertion(+)

diff --git a/setup.py b/setup.py
index f4e9abc66..7989850c5 100644
--- a/setup.py
+++ b/setup.py
@@ -31,5 +31,6 @@ def run(self):
         cbuild()
         super().run
 
+
 cbuild()
 setup(ext_modules=extensions, cmdclass={"build_ext": SimulatorBuild} if sys.platform == "win32" else {}),

From 6d93092a68dfe2650144c4988c6306be850f8a67 Mon Sep 17 00:00:00 2001
From: Alex B <89206887+alex124585@users.noreply.github.com>
Date: Thu, 12 Sep 2024 17:06:20 -0400
Subject: [PATCH 62/68] Update qokit-package.yml

---
 .github/workflows/qokit-package.yml | 6 +++---
 1 file changed, 3 insertions(+), 3 deletions(-)

diff --git a/.github/workflows/qokit-package.yml b/.github/workflows/qokit-package.yml
index 3c19763f4..2389e62c3 100644
--- a/.github/workflows/qokit-package.yml
+++ b/.github/workflows/qokit-package.yml
@@ -31,9 +31,9 @@ jobs:
       run: |
           brew install gcc
           export PATH=$PATH:/opt/homebrew/
-    # - name: black check
-    #   run:  |
-    #       black --check .
+    - name: black check
+      run:  |
+          black --check .
     - name: pip install   
       run: |
           pip install .  

From fd42d6dfd3a71b673bb6a82e9cd911b2f420b5c3 Mon Sep 17 00:00:00 2001
From: Alex B <89206887+alex124585@users.noreply.github.com>
Date: Thu, 12 Sep 2024 17:06:47 -0400
Subject: [PATCH 63/68] Update qokit-python-only-unix.yml

---
 .github/workflows/qokit-python-only-unix.yml | 6 +++---
 1 file changed, 3 insertions(+), 3 deletions(-)

diff --git a/.github/workflows/qokit-python-only-unix.yml b/.github/workflows/qokit-python-only-unix.yml
index dfa3d98c2..e13cf1df7 100644
--- a/.github/workflows/qokit-python-only-unix.yml
+++ b/.github/workflows/qokit-python-only-unix.yml
@@ -26,9 +26,9 @@ jobs:
       run: |
         python -m pip install --upgrade pip
         pip install pipreqs black addheader pytest-cov pip-licenses
-    # - name: black check
-    #   run:  |
-    #       black --check .
+    - name: black check
+      run:  |
+          black --check .
     - name: pip install 
       run: |
         export QOKIT_PYTHON_ONLY=true 

From 7194c2c391e3ee94e9678f1796ceea7be8b5130b Mon Sep 17 00:00:00 2001
From: Alex B <89206887+alex124585@users.noreply.github.com>
Date: Thu, 12 Sep 2024 17:35:56 -0400
Subject: [PATCH 64/68] Update test_simulator_build.py

---
 tests/test_simulator_build.py | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/tests/test_simulator_build.py b/tests/test_simulator_build.py
index dede4ff1a..6711013dc 100644
--- a/tests/test_simulator_build.py
+++ b/tests/test_simulator_build.py
@@ -7,8 +7,8 @@
 import numpy as np
 from qokit import get_qaoa_labs_objective
 from qokit.fur import get_available_simulator_names
-
-PYTHON_ONLY = os.environ.get("QOKIT_PYTHON_ONLY") == "true"
+# Uncomment to install python only version locally before running pip install . 
+# PYTHON_ONLY = os.environ.get("QOKIT_PYTHON_ONLY") == "true"
 
 
 @pytest.mark.skipif(not PYTHON_ONLY, reason="Fast c/c++ simulator should be installed")

From 2c6d1fd73ac2739b42cfaba95df6ce70d0f8e1fd Mon Sep 17 00:00:00 2001
From: Buts <D124585@NAEAST.AD.JPMORGANCHASE.com>
Date: Thu, 12 Sep 2024 17:37:28 -0400
Subject: [PATCH 65/68] black format

---
 tests/test_simulator_build.py | 3 ++-
 1 file changed, 2 insertions(+), 1 deletion(-)

diff --git a/tests/test_simulator_build.py b/tests/test_simulator_build.py
index 6711013dc..2c3d33ecd 100644
--- a/tests/test_simulator_build.py
+++ b/tests/test_simulator_build.py
@@ -7,7 +7,8 @@
 import numpy as np
 from qokit import get_qaoa_labs_objective
 from qokit.fur import get_available_simulator_names
-# Uncomment to install python only version locally before running pip install . 
+
+# Uncomment to install python only version locally before running pip install .
 # PYTHON_ONLY = os.environ.get("QOKIT_PYTHON_ONLY") == "true"
 
 

From 61707952b5bbf495ece9e0e99bda7e4f7dc98084 Mon Sep 17 00:00:00 2001
From: Alex B <89206887+alex124585@users.noreply.github.com>
Date: Thu, 12 Sep 2024 17:49:44 -0400
Subject: [PATCH 66/68] Update test_simulator_build.py

---
 tests/test_simulator_build.py | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/tests/test_simulator_build.py b/tests/test_simulator_build.py
index 2c3d33ecd..0dc831033 100644
--- a/tests/test_simulator_build.py
+++ b/tests/test_simulator_build.py
@@ -8,8 +8,8 @@
 from qokit import get_qaoa_labs_objective
 from qokit.fur import get_available_simulator_names
 
-# Uncomment to install python only version locally before running pip install .
-# PYTHON_ONLY = os.environ.get("QOKIT_PYTHON_ONLY") == "true"
+# Set up QOKIT_PYTHON_ONLY in your local enviroment for Python only 
+PYTHON_ONLY = os.environ.get("QOKIT_PYTHON_ONLY") == "true"
 
 
 @pytest.mark.skipif(not PYTHON_ONLY, reason="Fast c/c++ simulator should be installed")

From 694a6d3a3b086823c6140817bdcdab10fe65f634 Mon Sep 17 00:00:00 2001
From: Buts <D124585@NAEAST.AD.JPMORGANCHASE.com>
Date: Thu, 12 Sep 2024 17:51:45 -0400
Subject: [PATCH 67/68] black format

---
 tests/test_simulator_build.py | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/tests/test_simulator_build.py b/tests/test_simulator_build.py
index 0dc831033..2ef64d2ef 100644
--- a/tests/test_simulator_build.py
+++ b/tests/test_simulator_build.py
@@ -8,7 +8,7 @@
 from qokit import get_qaoa_labs_objective
 from qokit.fur import get_available_simulator_names
 
-# Set up QOKIT_PYTHON_ONLY in your local enviroment for Python only 
+# Set up QOKIT_PYTHON_ONLY in your local enviroment for Python only
 PYTHON_ONLY = os.environ.get("QOKIT_PYTHON_ONLY") == "true"
 
 

From d624e21b922dd7f3e1873e4dab68b7b3a60af061 Mon Sep 17 00:00:00 2001
From: Alex B <89206887+alex124585@users.noreply.github.com>
Date: Thu, 12 Sep 2024 18:16:28 -0400
Subject: [PATCH 68/68] Update test_simulator_build.py

---
 tests/test_simulator_build.py | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/tests/test_simulator_build.py b/tests/test_simulator_build.py
index 2ef64d2ef..598a2daaa 100644
--- a/tests/test_simulator_build.py
+++ b/tests/test_simulator_build.py
@@ -9,7 +9,7 @@
 from qokit.fur import get_available_simulator_names
 
 # Set up QOKIT_PYTHON_ONLY in your local enviroment for Python only
-PYTHON_ONLY = os.environ.get("QOKIT_PYTHON_ONLY") == "true"
+PYTHON_ONLY = os.environ.get("QOKIT_PYTHON_ONLY")
 
 
 @pytest.mark.skipif(not PYTHON_ONLY, reason="Fast c/c++ simulator should be installed")