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Automatic Segmentation of Spinal Cord Gray Matter Across Multiple MRI Contrasts and Regions

Repo for train a model contrast and region agnostic for segment the spinal cord gray matter

GMseg

  1. Main Dependencies

SCT 6.3

  1. Datasets to use
Dataset Sequence Axial res (mm2) Category Region N
sct-testing-large
gmseg-challenge-2016
marseille-t2s-template
lumbar-vanderbilt 3T T2Star
exvivo-spinal-cord
ucsf-gm-psir 3T PSIR 0,78 × 0,78 HC C2-3 110