diff --git a/CHANGELOG-publication-vignettes.md b/CHANGELOG-publication-vignettes.md
new file mode 100644
index 0000000000..4fa1c1c6a8
--- /dev/null
+++ b/CHANGELOG-publication-vignettes.md
@@ -0,0 +1 @@
+- Add visualization vignettes section to publication page.
\ No newline at end of file
diff --git a/context/app/api/client.py b/context/app/api/client.py
index 0d82edaa0b..d2e20f2e54 100644
--- a/context/app/api/client.py
+++ b/context/app/api/client.py
@@ -5,7 +5,7 @@
from flask import abort, current_app
import requests
-
+import frontmatter
from hubmap_commons.type_client import TypeClient
from .client_utils import files_from_response
@@ -209,6 +209,55 @@ def get_assay(name):
vitessce_conf=vitessce_conf,
vis_lifted_uuid=vis_lifted_uuid)
+ def _file_request(self, url, body_json=None):
+ headers = {'Authorization': 'Bearer ' + self.groups_token} if self.groups_token else {}
+
+ if self.groups_token:
+ url += f"?token={self.groups_token}"
+ try:
+ response = (
+ requests.get(url, headers=headers)
+ )
+ except requests.exceptions.ConnectTimeout as error:
+ current_app.logger.error(error)
+ abort(504)
+ try:
+ response.raise_for_status()
+ except requests.exceptions.HTTPError as error:
+ current_app.logger.error(error.response.text)
+ status = error.response.status_code
+ if status in [400, 404]:
+ # The same 404 page will be returned,
+ # whether it's a missing route in portal-ui,
+ # or a missing entity in the API.
+ abort(status)
+ if status in [401]:
+ # I believe we have 401 errors when the globus credentials
+ # have expired, but are still in the flask session.
+ abort(status)
+ raise
+ return response.text
+
+ def get_publication_vignettes(self, uuid):
+ vignettes_path = f"{current_app.config['ASSETS_ENDPOINT']}/{uuid}/vignettes/"
+ vignette_data = {}
+
+ i = 1
+ while True:
+ try:
+ vignette_dir_name = _get_vignette_dir_name(i)
+ description_text = self._file_request(
+ f"{vignettes_path}/{vignette_dir_name}/description.md")
+ metadata_content = frontmatter.loads(description_text)
+ vignette_data[vignette_dir_name] = {
+ **metadata_content.metadata,
+ 'vignette_description_md': metadata_content.content}
+ i += 1
+ except Exception:
+ break
+
+ return vignette_data
+
def _make_query(constraints, uuids):
'''
@@ -463,3 +512,7 @@ def _get_latest_uuid(revisions):
]
return max(clean_revisions,
key=lambda revision: revision['revision_number'])['uuid']
+
+
+def _get_vignette_dir_name(vignette_number):
+ return f"vignette_{vignette_number:02}"
diff --git a/context/app/routes_browse.py b/context/app/routes_browse.py
index 318b72398b..ff26598b19 100644
--- a/context/app/routes_browse.py
+++ b/context/app/routes_browse.py
@@ -64,6 +64,9 @@ def details(type, uuid):
'vis_lifted_uuid': conf_cells_uuid.vis_lifted_uuid
})
+ if type == 'publication':
+ flask_data.update({'vignette_data': client.get_publication_vignettes(uuid)})
+
template = 'base-pages/react-content.html'
return render_template(
template,
diff --git a/context/app/static/js/components/Routes/Routes.jsx b/context/app/static/js/components/Routes/Routes.jsx
index c87e3dbbb9..ce2f6decdd 100644
--- a/context/app/static/js/components/Routes/Routes.jsx
+++ b/context/app/static/js/components/Routes/Routes.jsx
@@ -48,6 +48,7 @@ function Routes({ flaskData }) {
organs,
organs_count,
organ,
+ vignette_data,
} = flaskData;
const urlPath = window.location.pathname;
const url = window.location.href;
@@ -100,7 +101,7 @@ function Routes({ flaskData }) {
if (urlPath.startsWith('/browse/publication/')) {
return (
-
+
);
}
@@ -296,6 +297,7 @@ Routes.propTypes = {
organs: PropTypes.object,
metadata: PropTypes.object,
organs_count: PropTypes.number,
+ vignette_data: PropTypes.object,
}),
};
diff --git a/context/app/static/js/components/detailPage/visualization/Visualization/style.js b/context/app/static/js/components/detailPage/visualization/Visualization/style.js
index 6b2e9d21f9..dad7aacde5 100644
--- a/context/app/static/js/components/detailPage/visualization/Visualization/style.js
+++ b/context/app/static/js/components/detailPage/visualization/Visualization/style.js
@@ -75,12 +75,13 @@ const StyledFooterText = styled(Typography)`
`;
const StyledDetailPageSection = styled(DetailPageSection)`
+ width: 100%;
${(props) =>
props.$vizIsFullscreen &&
css`
z-index: ${props.theme.zIndex.visualization};
position: relative;
- `}
+ `};
`;
const bodyExpandedCSS = css`
diff --git a/context/app/static/js/components/publications/PublicationVignette/PublicationVignette.jsx b/context/app/static/js/components/publications/PublicationVignette/PublicationVignette.jsx
new file mode 100644
index 0000000000..757637165b
--- /dev/null
+++ b/context/app/static/js/components/publications/PublicationVignette/PublicationVignette.jsx
@@ -0,0 +1,70 @@
+import React, { useContext, useEffect, useState } from 'react';
+import ReactMarkdown from 'react-markdown';
+
+import { AppContext } from 'js/components/Providers';
+import VisualizationWrapper from 'js/components/detailPage/visualization/VisualizationWrapper';
+
+import { fillUrls } from './utils';
+
+async function fetchVitessceConf({ assetsEndpoint, uuid, filePath, groupsToken, vignetteDirName }) {
+ const urlHandler = (url, isZarr) => {
+ return `${url.replace('{{ base_url }}', `${assetsEndpoint}/${uuid}/data`)}${isZarr ? '' : `?token=${groupsToken}`}`;
+ };
+
+ const requestInitHandler = () => {
+ return {
+ headers: { Authorization: `Bearer ${groupsToken}` },
+ };
+ };
+ const response = await fetch(
+ `${assetsEndpoint}/${uuid}/vignettes/${vignetteDirName}/${filePath}?token=${groupsToken}`,
+ {
+ headers: {
+ 'Content-Type': 'application/json',
+ },
+ },
+ );
+
+ if (!response.ok) {
+ console.error('Assets API failed', response);
+ return undefined;
+ }
+ const conf = await response.json();
+ return fillUrls(conf, urlHandler, requestInitHandler);
+}
+
+function PublicationVignette({ vignette, vignetteDirName, uuid }) {
+ const { assetsEndpoint, groupsToken } = useContext(AppContext);
+
+ const [vitessceConfs, setVitessceConfs] = useState(undefined);
+
+ useEffect(() => {
+ async function getAndSetVitessceConf() {
+ const figuresConfs = await Promise.all(
+ vignette.figures.map((figure) => {
+ return fetchVitessceConf({ assetsEndpoint, uuid, filePath: figure.file, groupsToken, vignetteDirName });
+ }),
+ );
+ setVitessceConfs(figuresConfs);
+ }
+ getAndSetVitessceConf();
+ }, [assetsEndpoint, groupsToken, uuid, vignette.figures, vignetteDirName]);
+
+ if (vitessceConfs) {
+ return (
+ <>
+ {vignette.vignette_description_md}
+
+ >
+ );
+ }
+
+ return null;
+}
+
+export default PublicationVignette;
diff --git a/context/app/static/js/components/publications/PublicationVignette/index.js b/context/app/static/js/components/publications/PublicationVignette/index.js
new file mode 100644
index 0000000000..ed320e09fb
--- /dev/null
+++ b/context/app/static/js/components/publications/PublicationVignette/index.js
@@ -0,0 +1,3 @@
+import PublicationVignette from './PublicationVignette';
+
+export default PublicationVignette;
diff --git a/context/app/static/js/components/publications/PublicationVignette/utils.js b/context/app/static/js/components/publications/PublicationVignette/utils.js
new file mode 100644
index 0000000000..ae32b4b1ae
--- /dev/null
+++ b/context/app/static/js/components/publications/PublicationVignette/utils.js
@@ -0,0 +1,53 @@
+/**
+ * @param {object} config The "template" config containing URLs with "{{ base_url }}".
+ * @param {function} handleUrl Function that takes in a (potentially template) URL string and returns a filled-in URL string.
+ * @returns {object} The config with handleUrl having been called to process every URL.
+ */
+const fillUrls = (config, handleUrl, handleRequestInit) => {
+ return {
+ ...config,
+ datasets: config.datasets.map((datasetDef) => {
+ return {
+ ...datasetDef,
+ files: datasetDef.files.map((fileDef) => {
+ return {
+ ...fileDef,
+ ...(fileDef.url
+ ? {
+ url: handleUrl(fileDef.url, fileDef.fileType.includes('zarr')),
+ }
+ : {}),
+ ...(fileDef.fileType.includes('zarr')
+ ? {
+ requestInit: handleRequestInit(),
+ }
+ : {}),
+ ...(fileDef.options?.images
+ ? {
+ options: {
+ ...fileDef.options,
+ images: fileDef.options.images.map((imageDef) => {
+ return {
+ ...imageDef,
+ url: handleUrl(imageDef.url, false),
+ ...(imageDef.metadata?.omeTiffOffsetsUrl
+ ? {
+ metadata: {
+ ...imageDef.metadata,
+ omeTiffOffsetsUrl: handleUrl(imageDef.metadata.omeTiffOffsetsUrl, false),
+ },
+ }
+ : {}),
+ };
+ }),
+ },
+ }
+ : {}),
+ };
+ }),
+ };
+ }),
+ };
+};
+
+export { fillUrls };
diff --git a/context/app/static/js/components/publications/PublicationVisualizationsSection/PublicationsVisualizationSection.jsx b/context/app/static/js/components/publications/PublicationVisualizationsSection/PublicationsVisualizationSection.jsx
new file mode 100644
index 0000000000..9ef47a7750
--- /dev/null
+++ b/context/app/static/js/components/publications/PublicationVisualizationsSection/PublicationsVisualizationSection.jsx
@@ -0,0 +1,43 @@
+import React, { useState } from 'react';
+import Accordion from '@material-ui/core/ExpansionPanel';
+import Typography from '@material-ui/core/Typography';
+import ArrowDropUpRoundedIcon from '@material-ui/icons/ArrowDropUpRounded';
+
+import SectionHeader from 'js/shared-styles/sections/SectionHeader';
+import { DetailPageSection } from 'js/components/detailPage/style';
+import PublicationVignette from 'js/components/publications/PublicationVignette';
+import PrimaryColorAccordionSummary from 'js/shared-styles/accordions/PrimaryColorAccordionSummary';
+import { StyledAccordionDetails } from './style';
+
+function PublicationsVisualizationSection({ vignette_data, uuid }) {
+ const [expandedIndex, setExpandedIndex] = useState(0);
+
+ const handleChange = (i) => (event, isExpanded) => {
+ setExpandedIndex(isExpanded ? i : false);
+ };
+
+ return (
+
+ Visualizations
+ {Object.entries(vignette_data).map(([k, v], i) => {
+ return (
+
+ }>
+ {`Vignette ${i + 1}: ${v.name}`}
+
+
+ ;
+
+
+ );
+ })}
+
+ );
+}
+
+export default PublicationsVisualizationSection;
diff --git a/context/app/static/js/components/publications/PublicationVisualizationsSection/index.js b/context/app/static/js/components/publications/PublicationVisualizationsSection/index.js
new file mode 100644
index 0000000000..7d1b15d3db
--- /dev/null
+++ b/context/app/static/js/components/publications/PublicationVisualizationsSection/index.js
@@ -0,0 +1,3 @@
+import PublicationsVisualizationSection from './PublicationsVisualizationSection';
+
+export default PublicationsVisualizationSection;
diff --git a/context/app/static/js/components/publications/PublicationVisualizationsSection/style.js b/context/app/static/js/components/publications/PublicationVisualizationsSection/style.js
new file mode 100644
index 0000000000..3d63d34806
--- /dev/null
+++ b/context/app/static/js/components/publications/PublicationVisualizationsSection/style.js
@@ -0,0 +1,9 @@
+import styled from 'styled-components';
+
+import AccordionDetails from '@material-ui/core/AccordionDetails';
+
+const StyledAccordionDetails = styled(AccordionDetails)`
+ flex-direction: column;
+`;
+
+export { StyledAccordionDetails };
diff --git a/context/app/static/js/pages/Publication/Publication.jsx b/context/app/static/js/pages/Publication/Publication.jsx
index 5aa043182a..4a352d0ed5 100644
--- a/context/app/static/js/pages/Publication/Publication.jsx
+++ b/context/app/static/js/pages/Publication/Publication.jsx
@@ -6,13 +6,14 @@ import OutboundIconLink from 'js/shared-styles/Links/iconLinks/OutboundIconLink'
import { getCombinedDatasetStatus, getSectionOrder } from 'js/components/detailPage/utils';
import ContributorsTable from 'js/components/detailPage/ContributorsTable/ContributorsTable';
import PublicationsDataSection from 'js/components/publications/PublicationsDataSection';
+import PublicationsVisualizationSection from 'js/components/publications/PublicationVisualizationsSection/';
import ProvSection from 'js/components/detailPage/provenance/ProvSection';
import DetailLayout from 'js/components/detailPage/DetailLayout';
import useEntityStore from 'js/stores/useEntityStore';
const entityStoreSelector = (state) => state.setAssayMetadata;
-function Publication({ publication }) {
+function Publication({ publication, vignette_data }) {
const {
title,
uuid,
@@ -35,7 +36,7 @@ function Publication({ publication }) {
const setAssayMetadata = useEntityStore(entityStoreSelector);
setAssayMetadata({ hubmap_id, entity_type, title, publication_venue });
- const sectionOrder = getSectionOrder(['summary', 'data', 'authors', 'provenance'], {});
+ const sectionOrder = getSectionOrder(['summary', 'data', 'visualizations', 'authors', 'provenance'], {});
const combinedStatus = getCombinedDatasetStatus({ sub_status, status });
@@ -60,6 +61,7 @@ function Publication({ publication }) {
{hasDOI && {doi_url}}
+
diff --git a/context/app/static/js/shared-styles/accordions/PrimaryColorAccordionSummary/index.js b/context/app/static/js/shared-styles/accordions/PrimaryColorAccordionSummary/index.js
new file mode 100644
index 0000000000..0c2b52ad6a
--- /dev/null
+++ b/context/app/static/js/shared-styles/accordions/PrimaryColorAccordionSummary/index.js
@@ -0,0 +1,3 @@
+import { PrimaryColorAccordionSummary } from './style';
+
+export default PrimaryColorAccordionSummary;
diff --git a/context/app/static/js/shared-styles/accordions/PrimaryColorAccordionSummary/style.js b/context/app/static/js/shared-styles/accordions/PrimaryColorAccordionSummary/style.js
new file mode 100644
index 0000000000..5acf726310
--- /dev/null
+++ b/context/app/static/js/shared-styles/accordions/PrimaryColorAccordionSummary/style.js
@@ -0,0 +1,17 @@
+import styled, { css } from 'styled-components';
+
+import AccordionSummary from '@material-ui/core/ExpansionPanelSummary';
+
+const PrimaryColorAccordionSummary = styled(AccordionSummary)`
+ ${(props) =>
+ props.$isExpanded &&
+ css`
+ background-color: ${props.$isExpanded ? props.theme.palette.primary.main : '#E0E0E0'};
+
+ div > * {
+ color: ${props.$isExpanded ? '#fff' : props.theme.palette.text.primary};
+ }
+ `}
+`;
+
+export { PrimaryColorAccordionSummary };
diff --git a/context/package-lock.json b/context/package-lock.json
index d722bb0eae..0294efda63 100644
--- a/context/package-lock.json
+++ b/context/package-lock.json
@@ -58,6 +58,7 @@
"react-hook-form": "^7.38.0",
"react-intersection-observer": "^8.28.6",
"react-joyride": "^2.2.1",
+ "react-markdown": "^8.0.6",
"react-pdf": "^5.3.2",
"react-spring": "^8.0.27",
"react-vega": "^7.3.0",
@@ -19107,6 +19108,14 @@
"resolved": "https://registry.npmjs.org/@types/d3-time-format/-/d3-time-format-2.3.1.tgz",
"integrity": "sha512-fck0Z9RGfIQn3GJIEKVrp15h9m6Vlg0d5XXeiE/6+CQiBmMDZxfR21XtjEPuDeg7gC3bBM0SdieA5XF3GW1wKA=="
},
+ "node_modules/@types/debug": {
+ "version": "4.1.7",
+ "resolved": "https://registry.npmjs.org/@types/debug/-/debug-4.1.7.tgz",
+ "integrity": "sha512-9AonUzyTjXXhEOa0DnqpzZi6VHlqKMswga9EXjpXnnqxwLtdvPPtlO8evrI5D9S6asFRCQ6v+wpiUKbw+vKqyg==",
+ "dependencies": {
+ "@types/ms": "*"
+ }
+ },
"node_modules/@types/detect-browser": {
"version": "4.0.0",
"resolved": "https://registry.npmjs.org/@types/detect-browser/-/detect-browser-4.0.0.tgz",
@@ -19313,6 +19322,11 @@
"integrity": "sha512-fZQQafSREFyuZcdWFAExYjBiCL7AUCdgsk80iO0q4yihYYdcIiH28CcuPTGFgLOCC8RlW49GSQxdHwZP+I7CNg==",
"dev": true
},
+ "node_modules/@types/ms": {
+ "version": "0.7.31",
+ "resolved": "https://registry.npmjs.org/@types/ms/-/ms-0.7.31.tgz",
+ "integrity": "sha512-iiUgKzV9AuaEkZqkOLDIvlQiL6ltuZd9tGcW3gwpnX8JbuiuhFlEGmmFXEXkN50Cvq7Os88IY2v0dkDqXYWVgA=="
+ },
"node_modules/@types/node": {
"version": "14.18.36",
"resolved": "https://registry.npmjs.org/@types/node/-/node-14.18.36.tgz",
@@ -26446,6 +26460,27 @@
"@deck.gl/react": "8.8.27"
}
},
+ "node_modules/decode-named-character-reference": {
+ "version": "1.0.2",
+ "resolved": "https://registry.npmjs.org/decode-named-character-reference/-/decode-named-character-reference-1.0.2.tgz",
+ "integrity": "sha512-O8x12RzrUF8xyVcY0KJowWsmaJxQbmy0/EtnNtHRpsOcT7dFk5W598coHqBVpmWo1oQQfsCqfCmkZN5DJrZVdg==",
+ "dependencies": {
+ "character-entities": "^2.0.0"
+ },
+ "funding": {
+ "type": "github",
+ "url": "https://github.com/sponsors/wooorm"
+ }
+ },
+ "node_modules/decode-named-character-reference/node_modules/character-entities": {
+ "version": "2.0.2",
+ "resolved": "https://registry.npmjs.org/character-entities/-/character-entities-2.0.2.tgz",
+ "integrity": "sha512-shx7oQ0Awen/BRIdkjkvz54PnEEI/EjwXDSIZp86/KKdbafHh1Df/RYGBhn4hbe2+uKC9FnT5UCEdyPz3ai9hQ==",
+ "funding": {
+ "type": "github",
+ "url": "https://github.com/sponsors/wooorm"
+ }
+ },
"node_modules/decode-uri-component": {
"version": "0.2.0",
"resolved": "https://registry.npmjs.org/decode-uri-component/-/decode-uri-component-0.2.0.tgz",
@@ -26807,6 +26842,14 @@
"node": ">=0.4.0"
}
},
+ "node_modules/diff": {
+ "version": "5.1.0",
+ "resolved": "https://registry.npmjs.org/diff/-/diff-5.1.0.tgz",
+ "integrity": "sha512-D+mk+qE8VC/PAUrlAU34N+VfXev0ghe5ywmpqrawphmVZc1bEfn56uo9qpyGp1p4xpzOHkSW4ztBd6L7Xx4ACw==",
+ "engines": {
+ "node": ">=0.3.1"
+ }
+ },
"node_modules/diff-sequences": {
"version": "25.2.6",
"resolved": "https://registry.npmjs.org/diff-sequences/-/diff-sequences-25.2.6.tgz",
@@ -38368,6 +38411,53 @@
"url": "https://opencollective.com/unified"
}
},
+ "node_modules/mdast-util-from-markdown": {
+ "version": "1.3.0",
+ "resolved": "https://registry.npmjs.org/mdast-util-from-markdown/-/mdast-util-from-markdown-1.3.0.tgz",
+ "integrity": "sha512-HN3W1gRIuN/ZW295c7zi7g9lVBllMgZE40RxCX37wrTPWXCWtpvOZdfnuK+1WNpvZje6XuJeI3Wnb4TJEUem+g==",
+ "dependencies": {
+ "@types/mdast": "^3.0.0",
+ "@types/unist": "^2.0.0",
+ "decode-named-character-reference": "^1.0.0",
+ "mdast-util-to-string": "^3.1.0",
+ "micromark": "^3.0.0",
+ "micromark-util-decode-numeric-character-reference": "^1.0.0",
+ "micromark-util-decode-string": "^1.0.0",
+ "micromark-util-normalize-identifier": "^1.0.0",
+ "micromark-util-symbol": "^1.0.0",
+ "micromark-util-types": "^1.0.0",
+ "unist-util-stringify-position": "^3.0.0",
+ "uvu": "^0.5.0"
+ },
+ "funding": {
+ "type": "opencollective",
+ "url": "https://opencollective.com/unified"
+ }
+ },
+ "node_modules/mdast-util-from-markdown/node_modules/mdast-util-to-string": {
+ "version": "3.1.1",
+ "resolved": "https://registry.npmjs.org/mdast-util-to-string/-/mdast-util-to-string-3.1.1.tgz",
+ "integrity": "sha512-tGvhT94e+cVnQt8JWE9/b3cUQZWS732TJxXHktvP+BYo62PpYD53Ls/6cC60rW21dW+txxiM4zMdc6abASvZKA==",
+ "dependencies": {
+ "@types/mdast": "^3.0.0"
+ },
+ "funding": {
+ "type": "opencollective",
+ "url": "https://opencollective.com/unified"
+ }
+ },
+ "node_modules/mdast-util-from-markdown/node_modules/unist-util-stringify-position": {
+ "version": "3.0.3",
+ "resolved": "https://registry.npmjs.org/unist-util-stringify-position/-/unist-util-stringify-position-3.0.3.tgz",
+ "integrity": "sha512-k5GzIBZ/QatR8N5X2y+drfpWG8IDBzdnVj6OInRNWm1oXrzydiaAT2OQiA8DPRRZyAKb9b6I2a6PxYklZD0gKg==",
+ "dependencies": {
+ "@types/unist": "^2.0.0"
+ },
+ "funding": {
+ "type": "opencollective",
+ "url": "https://opencollective.com/unified"
+ }
+ },
"node_modules/mdast-util-to-hast": {
"version": "10.0.1",
"resolved": "https://registry.npmjs.org/mdast-util-to-hast/-/mdast-util-to-hast-10.0.1.tgz",
@@ -38530,6 +38620,428 @@
"integrity": "sha512-jo1OfR4TaEwd5HOrt5+tAZ9mqT4jmpNAusXtyfNzqVm9uiSYFZlKM1wYL4oU7azZW/PxQW53wM0S6OR1JHNa2g==",
"dev": true
},
+ "node_modules/micromark": {
+ "version": "3.1.0",
+ "resolved": "https://registry.npmjs.org/micromark/-/micromark-3.1.0.tgz",
+ "integrity": "sha512-6Mj0yHLdUZjHnOPgr5xfWIMqMWS12zDN6iws9SLuSz76W8jTtAv24MN4/CL7gJrl5vtxGInkkqDv/JIoRsQOvA==",
+ "funding": [
+ {
+ "type": "GitHub Sponsors",
+ "url": "https://github.com/sponsors/unifiedjs"
+ },
+ {
+ "type": "OpenCollective",
+ "url": "https://opencollective.com/unified"
+ }
+ ],
+ "dependencies": {
+ "@types/debug": "^4.0.0",
+ "debug": "^4.0.0",
+ "decode-named-character-reference": "^1.0.0",
+ "micromark-core-commonmark": "^1.0.1",
+ "micromark-factory-space": "^1.0.0",
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+ "resolved": "https://registry.npmjs.org/unist-util-visit/-/unist-util-visit-4.1.2.tgz",
+ "integrity": "sha512-MSd8OUGISqHdVvfY9TPhyK2VdUrPgxkUtWSuMHF6XAAFuL4LokseigBnZtPnJMu+FbynTkFNnFlyjxpVKujMRg==",
+ "requires": {
+ "@types/unist": "^2.0.0",
+ "unist-util-is": "^5.0.0",
+ "unist-util-visit-parents": "^5.1.1"
+ }
+ },
+ "unist-util-visit-parents": {
+ "version": "5.1.3",
+ "resolved": "https://registry.npmjs.org/unist-util-visit-parents/-/unist-util-visit-parents-5.1.3.tgz",
+ "integrity": "sha512-x6+y8g7wWMyQhL1iZfhIPhDAs7Xwbn9nRosDXl7qoPTSCy0yNxnKc+hWokFifWQIDGi154rdUqKvbCa4+1kLhg==",
+ "requires": {
+ "@types/unist": "^2.0.0",
+ "unist-util-is": "^5.0.0"
+ }
+ },
+ "vfile": {
+ "version": "5.3.7",
+ "resolved": "https://registry.npmjs.org/vfile/-/vfile-5.3.7.tgz",
+ "integrity": "sha512-r7qlzkgErKjobAmyNIkkSpizsFPYiUPuJb5pNW1RB4JcYVZhs4lIbVqk8XPk033CV/1z8ss5pkax8SuhGpcG8g==",
+ "requires": {
+ "@types/unist": "^2.0.0",
+ "is-buffer": "^2.0.0",
+ "unist-util-stringify-position": "^3.0.0",
+ "vfile-message": "^3.0.0"
+ }
+ },
+ "vfile-message": {
+ "version": "3.1.4",
+ "resolved": "https://registry.npmjs.org/vfile-message/-/vfile-message-3.1.4.tgz",
+ "integrity": "sha512-fa0Z6P8HUrQN4BZaX05SIVXic+7kE3b05PWAtPuYP9QLHsLKYR7/AlLW3NtOrpXRLeawpDLMsVkmk5DG0NXgWw==",
+ "requires": {
+ "@types/unist": "^2.0.0",
+ "unist-util-stringify-position": "^3.0.0"
+ }
+ }
+ }
+ },
"react-move": {
"version": "6.4.0",
"resolved": "https://registry.npmjs.org/react-move/-/react-move-6.4.0.tgz",
@@ -85483,6 +86850,14 @@
"tslib": "^1.9.0"
}
},
+ "sade": {
+ "version": "1.8.1",
+ "resolved": "https://registry.npmjs.org/sade/-/sade-1.8.1.tgz",
+ "integrity": "sha512-xal3CZX1Xlo/k4ApwCFrHVACi9fBqJ7V+mwhBsuf/1IOKbBy098Fex+Wa/5QMubw09pSZ/u8EY8PWgevJsXp1A==",
+ "requires": {
+ "mri": "^1.1.0"
+ }
+ },
"safe-buffer": {
"version": "5.1.2",
"resolved": "https://registry.npmjs.org/safe-buffer/-/safe-buffer-5.1.2.tgz",
@@ -87444,6 +88819,11 @@
"resolved": "https://registry.npmjs.org/trim/-/trim-0.0.1.tgz",
"integrity": "sha1-WFhUf2spB1fulczMZm+1AITEYN0="
},
+ "trim-lines": {
+ "version": "3.0.1",
+ "resolved": "https://registry.npmjs.org/trim-lines/-/trim-lines-3.0.1.tgz",
+ "integrity": "sha512-kRj8B+YHZCc9kQYdWfJB2/oUl9rA99qbowYYBtr4ui4mZyAQ2JpvVBd/6U2YloATfqBhBTSMhTpgBHtU0Mf3Rg=="
+ },
"trim-newlines": {
"version": "3.0.1",
"resolved": "https://registry.npmjs.org/trim-newlines/-/trim-newlines-3.0.1.tgz",
@@ -88115,6 +89495,24 @@
"integrity": "sha1-DwWkCu90+eWVHiDvv0SxGHHlZBA=",
"dev": true
},
+ "uvu": {
+ "version": "0.5.6",
+ "resolved": "https://registry.npmjs.org/uvu/-/uvu-0.5.6.tgz",
+ "integrity": "sha512-+g8ENReyr8YsOc6fv/NVJs2vFdHBnBNdfE49rshrTzDWOlUx4Gq7KOS2GD8eqhy2j+Ejq29+SbKH8yjkAqXqoA==",
+ "requires": {
+ "dequal": "^2.0.0",
+ "diff": "^5.0.0",
+ "kleur": "^4.0.3",
+ "sade": "^1.7.3"
+ },
+ "dependencies": {
+ "kleur": {
+ "version": "4.1.5",
+ "resolved": "https://registry.npmjs.org/kleur/-/kleur-4.1.5.tgz",
+ "integrity": "sha512-o+NO+8WrRiQEE4/7nwRJhN1HWpVmJm511pBHUxPLtp0BUISzlBplORYSmTclCnJvQq2tKu/sgl3xVpkc7ZWuQQ=="
+ }
+ }
+ },
"v8-compile-cache": {
"version": "2.1.1",
"resolved": "https://registry.npmjs.org/v8-compile-cache/-/v8-compile-cache-2.1.1.tgz",
diff --git a/context/package.json b/context/package.json
index a70ff5fb9c..3d0ed34b5f 100644
--- a/context/package.json
+++ b/context/package.json
@@ -51,6 +51,7 @@
"react-hook-form": "^7.38.0",
"react-intersection-observer": "^8.28.6",
"react-joyride": "^2.2.1",
+ "react-markdown": "^8.0.6",
"react-pdf": "^5.3.2",
"react-spring": "^8.0.27",
"react-vega": "^7.3.0",