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uses self.summarize options too
Build Containers #77: Commit 01bfdcf pushed by vickydaiya
November 30, 2023 20:06 8m 46s main
November 30, 2023 20:06 8m 46s
use both default and job provided options
Build Containers #76: Commit 0d52f95 pushed by vickydaiya
November 30, 2023 18:56 8m 45s main
November 30, 2023 18:56 8m 45s
Update organ-mapping.json
Build Containers #75: Commit 1e4ed89 pushed by vickydaiya
November 29, 2023 16:05 8m 50s main
November 29, 2023 16:05 8m 50s
fix for NaN gene_expr value
Build Containers #74: Commit cdba0f9 pushed by vickydaiya
November 28, 2023 23:07 8m 45s main
November 28, 2023 23:07 8m 45s
fix for count column not found
Build Containers #73: Commit 4fb1983 pushed by vickydaiya
November 28, 2023 22:10 15m 34s main
November 28, 2023 22:10 15m 34s
handles NaN gene expressions for jsonLd
Build Containers #72: Commit 6212441 pushed by vickydaiya
November 27, 2023 18:44 10m 7s main
November 27, 2023 18:44 10m 7s
Merge branch 'main' of https://github.com/hubmapconsortium/hra-workfl…
Build Containers #71: Commit 4434964 pushed by axdanbol
November 10, 2023 20:04 9m 53s main
November 10, 2023 20:04 9m 53s
Merge pull request #14 from hubmapconsortium/popv
Build Containers #70: Commit 97807db pushed by axdanbol
November 10, 2023 20:03 8m 38s main
November 10, 2023 20:03 8m 38s
Fix bug when parsing gene_expr in extract-summary
Build Containers #69: Commit 71d3367 pushed by axdanbol
November 10, 2023 18:35 8m 38s main
November 10, 2023 18:35 8m 38s
Fix gene expr serialization bug
Build Containers #68: Commit 6e453cd pushed by axdanbol
November 9, 2023 21:50 10m 4s main
November 9, 2023 21:50 10m 4s
Remove preprocess from build
Build Containers #67: Commit 71a8d44 pushed by axdanbol
November 8, 2023 14:15 9m 29s main
November 8, 2023 14:15 9m 29s
Skip further processing when annotation tool fails
Build Containers #66: Commit 110bd8d pushed by axdanbol
November 8, 2023 14:00 35s main
November 8, 2023 14:00 35s
A few tweaks to gene expression
Build Containers #65: Commit 0714f42 pushed by axdanbol
November 6, 2023 22:28 8m 40s main
November 6, 2023 22:28 8m 40s
Merge branch 'main' of https://github.com/hubmapconsortium/hra-workfl…
Build Containers #64: Commit 2e107d1 pushed by axdanbol
November 6, 2023 21:01 14m 12s main
November 6, 2023 21:01 14m 12s
Merge pull request #13 from hubmapconsortium/popv
Build Containers #63: Commit 3ac1f97 pushed by axdanbol
November 6, 2023 21:00 8m 43s main
November 6, 2023 21:00 8m 43s
Merge branch 'main' of https://github.com/hubmapconsortium/hra-workfl…
Build Containers #62: Commit b545052 pushed by axdanbol
November 3, 2023 21:18 11m 15s main
November 3, 2023 21:18 11m 15s
removed data-genes-column input (#12)
Build Containers #61: Commit e286724 pushed by axdanbol
November 3, 2023 20:47 12m 13s main
November 3, 2023 20:47 12m 13s
Fix renamed option
Build Containers #60: Commit 5e51229 pushed by axdanbol
November 3, 2023 19:48 57m 29s main
November 3, 2023 19:48 57m 29s
popv fixed (#11)
Build Containers #59: Commit 5bc65bf pushed by axdanbol
November 3, 2023 18:49 10m 35s main
November 3, 2023 18:49 10m 35s
Fix obs join in azimuth for conflicting columns
Build Containers #58: Commit 22fd51e pushed by axdanbol
October 27, 2023 17:14 12m 22s main
October 27, 2023 17:14 12m 22s
Downgrade zenodo_get in popv
Build Containers #57: Commit cd8eb3f pushed by axdanbol
October 27, 2023 15:07 12m 0s main
October 27, 2023 15:07 12m 0s
Disable parts of pipeline
Build Containers #56: Commit 1034593 pushed by axdanbol
October 26, 2023 20:11 12m 56s main
October 26, 2023 20:11 12m 56s
generates IRIs for labels not found in crosswalk (#8)
Build Containers #55: Commit a3533a9 pushed by axdanbol
October 25, 2023 17:33 13m 16s main
October 25, 2023 17:33 13m 16s
Add cleanup in docker build to reduce final image size
Build Containers #54: Commit d8d0453 pushed by axdanbol
October 25, 2023 17:16 11m 33s main
October 25, 2023 17:16 11m 33s
celltypist bug fixed: update celltypist to 1.6 (#7)
Build Containers #53: Commit 9b5856c pushed by axdanbol
October 25, 2023 16:24 15m 26s main
October 25, 2023 16:24 15m 26s