ccf-validation-tools/Anatomical_Systems/comments/

[giscus[bot]]

ccf-validation-tools/Anatomical_Systems/comments/

https://hubmapconsortium.github.io/ccf-validation-tools/Anatomical_Systems/comments/

[emquardokus]

anatomical-systems-DRAFT-v1.0
https://docs.google.com/spreadsheets/d/1oB3m_IOMEcDsdQoDicXd9KXXz7oytIPIPiu9lq88quU/edit#gid=2028977062
Different labels
fixed circulatory system UBERON:0001009

Blank ontology ID

• In row 18, no term id was found for the name/label liver.
  Added labels for liver UBERON:0002107
• IIn row 36, no term id was found for the name/label upper respiratory system.
  Change to upper respiratory tract UBERON:0001557
• IIn row 37, no term id was found for the name/label lower respiratory system.
  Change to lower respiratory tract UBERON:0001558

[emquardokus]

anatomical-systems-v1.1_DRAFT
https://docs.google.com/spreadsheets/d/13qyyCHS4lxgIfVtQJ_aVxB-aWch7oJG-psrZn4ZoFEM/edit#gid=2028977062

Different labels
Rows 49-55 Changed skeletal muscle organ to skeletal muscle organ, vertebrate

[emquardokus]

anatomical-systems-v1.1_DRAFT
https://docs.google.com/spreadsheets/d/13qyyCHS4lxgIfVtQJ_aVxB-aWch7oJG-psrZn4ZoFEM/edit?gid=2028977062#gid=2028977062

Different labels

1. FIXED kidney UBERON:0002113; The term UBERON:0011143 has a different name/label in the source ontology in the following 2 rows 44, 44. The name/label in the ASCT+B table is kidney and the one in the ontology is upper urinary tract. For reference, the given name/label by SMEs is kidney. Please correct it in the columns AS/N/LABEL or CT/N/LABEL in the ASCT+B table.