intel.yml

name: intel
on: [push, pull_request]

# Use custom shell with -l so .bash_profile is sourced which loads intel/oneapi/setvars.sh
# without having to do it in manually every step
defaults:
  run:
    shell: bash -leo pipefail {0}

jobs:
  intel-build-and-test:
    runs-on: ${{ matrix.os }}
    env:
      CC: icc
      FC: ifort
      CXX: icpc
    strategy:
      matrix:
        os: [ubuntu-20.04]

    steps:

    # See https://software.intel.com/content/www/us/en/develop/articles/oneapi-repo-instructions.html
    - name: install-intel
      run: |
        cd /tmp
        wget https://apt.repos.intel.com/intel-gpg-keys/GPG-PUB-KEY-INTEL-SW-PRODUCTS.PUB
        sudo apt-key add GPG-PUB-KEY-INTEL-SW-PRODUCTS.PUB
        rm GPG-PUB-KEY-INTEL-SW-PRODUCTS.PUB
        echo "deb https://apt.repos.intel.com/oneapi all main" | sudo tee /etc/apt/sources.list.d/oneAPI.list
        sudo apt-get update
        sudo apt-get install intel-oneapi-dev-utilities intel-oneapi-mpi-devel intel-oneapi-openmp intel-oneapi-compiler-fortran intel-oneapi-compiler-dpcpp-cpp-and-cpp-classic
        echo "source /opt/intel/oneapi/setvars.sh" >> ~/.bash_profile

    - name: cache-netcdf
      id: cache-netcdf
      uses: actions/cache@v2
      with:
        path: ~/netcdf
        key: netcdf-c-$4.7.4-{{ runner.os }}-intel

    - name: build-hdf5
      if: steps.cache-netcdf.outputs.cache-hit != 'true'
      run: |
        export CC=mpiicc
        wget https://support.hdfgroup.org/ftp/HDF5/releases/hdf5-1.10/hdf5-1.10.7/src/hdf5-1.10.7.tar.gz &> /dev/null
        tar -xzf hdf5-1.10.7.tar.gz
        pushd hdf5-1.10.7
        ./configure --prefix=${HOME}/netcdf --enable-parallel --disable-tools --disable-fortran --disable-cxx --enable-parallel-tests
        make -j2
        make install
           
    - name: build-netcdf-c
      if: steps.cache-netcdf.outputs.cache-hit != 'true'
      run: |
        export CC=mpiicc
        export CPPFLAGS=-I${HOME}/netcdf/include
        export LDFLAGS=-L${HOME}/netcdf/lib
        wget https://www.unidata.ucar.edu/downloads/netcdf/ftp/netcdf-c-4.7.4.tar.gz &> /dev/null
        tar -xzf netcdf-c-4.7.4.tar.gz
        pushd netcdf-c-4.7.4
        ./configure --prefix=${HOME}/netcdf --disable-dap --disable-utilities
        make -j2
        make install

    - name: build-netcdf-fortran
      if: steps.cache-netcdf.outputs.cache-hit != 'true'
      run: |
        export LD_LIBRARY_PATH="$LD_LIBRARY_PATH:${HOME}/netcdf/lib"
        export PATH="${HOME}/netcdf/bin:$PATH"
        export CC=mpiicc
        export FC=mpiifort
        export CPPFLAGS=-I${HOME}/netcdf/include
        export LDFLAGS=-L${HOME}/netcdf/lib
        wget https://github.com/Unidata/netcdf-fortran/archive/v4.5.3.tar.gz &> /dev/null
        tar -xzf v4.5.3.tar.gz
        pushd netcdf-fortran-4.5.3
        ./configure --prefix=${HOME}/netcdf
        make -j2
        make install

    - name: cache-esmf
      id: cache-esmf
      uses: actions/cache@v2
      with:
        path: ~/esmf
        key: esmf-8.0.1-${{ runner.os }}-intel

    - name: build-esmf
      if: steps.cache-esmf.outputs.cache-hit != 'true'
      run: |
        pushd ~
        export ESMF_DIR=~/esmf-ESMF_8_0_1
        wget https://github.com/esmf-org/esmf/archive/ESMF_8_0_1.tar.gz &> /dev/null
        tar zxf ESMF_8_0_1.tar.gz
        cd esmf-ESMF_8_0_1
        export ESMF_COMM=intelmpi
        export ESMF_INSTALL_BINDIR=bin
        export ESMF_INSTALL_LIBDIR=lib
        export ESMF_INSTALL_MODDIR=mod
        export ESMF_COMPILER=intel
        export ESMF_INSTALL_PREFIX=~/esmf
        export ESMF_NETCDF=split
        export ESMF_NETCDF_INCLUDE=${HOME}/netcdf/include
        export ESMF_NETCDF_LIBPATH=${HOME}/netcdf/lib
        make -j2
        make install

    - name: cache-jasper
      id: cache-jasper
      uses: actions/cache@v2
      with:
        path: ~/jasper
        key: jasper-2.0.25-${{ runner.os }}-intel

    - name: build-jasper
      if: steps.cache-jasper.outputs.cache-hit != 'true'
      run: |
        wget https://github.com/jasper-software/jasper/archive/version-2.0.25.tar.gz &> /dev/null
        tar zxf version-2.0.25.tar.gz
        cd jasper-version-2.0.25
        mkdir build-jasper && cd build-jasper
        cmake .. -DCMAKE_INSTALL_PREFIX=~/jasper
        make -j2
        make install

    - name: checkout-nceplibs
      uses: actions/checkout@v2
      with:
        repository: NOAA-EMC/NCEPLIBS
        path: nceplibs

    - name: cache-nceplibs
      id: cache-nceplibs
      uses: actions/cache@v2
      with:
        path: ~/nceplibs
        key: nceplibs-1.3.0-${{ runner.os }}-intel

    - name: build-nceplibs
      if: steps.cache-nceplibs.outputs.cache-hit != 'true'
      run: |
        export ESMFMKFILE=~/esmf/lib/esmf.mk
        wget https://github.com/NOAA-EMC/NCEPLIBS/archive/v1.3.0.tar.gz &> /dev/null
        tar zxf v1.3.0.tar.gz
        cd NCEPLIBS-1.3.0
        mkdir build && cd build
        cmake .. -DCMAKE_PREFIX_PATH='~;~/jasper;~/netcdf' -DCMAKE_INSTALL_PREFIX='~/nceplibs' -DFLAT=ON
        make -j2
       
    - name: checkout-ufs-utils
      uses: actions/checkout@v2
      with: 
        path: ufs_utils

    - name: build
      run: |
        export ESMFMKFILE=~/esmf/lib/esmf.mk
        cd ufs_utils
        mkdir build && cd build
        cmake .. -DCMAKE_BUILD_TYPE=Debug -DCMAKE_PREFIX_PATH='~;~/jasper;~/nceplibs;~/netcdf'
        make -j2
    
    - name: test
      run: |
        cd ufs_utils/build/tests
        wget -i ./chgres_cube/data/files.txt -P ./chgres_cube/data
        wget -i ./sfc_climo_gen/data/files.txt -P ./sfc_climo_gen/data
        cd ../
        ctest --rerun-failed --output-on-failure