Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Support for indexed OME-TIFF file output #95

Open
JohnGrime opened this issue Jan 19, 2023 · 3 comments
Open

Support for indexed OME-TIFF file output #95

JohnGrime opened this issue Jan 19, 2023 · 3 comments
Labels
enhancement New feature or request

Comments

@JohnGrime
Copy link

Hello!

Is it possible to add support for generating "indexed" OME TIFF file output? I'd like to generate some test data for use with the Viv system (specifically the Avivator web viewer) and this platform seems to recommend indexed OME TIFF data. The index file is a separate json data set:

https://github.com/hms-dbmi/viv
https://www.youtube.com/watch?v=cGB2TsSnfbo

Thanks!

John.

@melissalinkert
Copy link
Member

I believe this similar to what @joshmoore requested in #60, which we had started to implement in #61. https://github.com/hms-dbmi/generate-tiff-offsets#readme appears to be the specification.

It's unlikely that we'll have time to revisit this feature in the near future, but happy to review a pull request if you're interested in implementing this @JohnGrime.

@JohnGrime
Copy link
Author

I'll take a look and see - hopefully it's a fairly simple addition and may be within my limited skills to implement! :)

@joshmoore
Copy link
Contributor

@JohnGrime: 👍

I'll also cc: @manzt and link kerchunk in case you haven't seen the more general version of Trevor & co's TIFF index.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
enhancement New feature or request
Projects
Status: Inbox
Development

No branches or pull requests

3 participants