dag.svg

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<!-- Title: snakemake_dag Pages: 1 -->
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<!-- 1 -->
<g id="node2" class="node">
<title>1</title>
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<!-- 1&#45;&gt;0 -->
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<title>1&#45;&gt;0</title>
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<!-- 2 -->
<g id="node3" class="node">
<title>2</title>
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<!-- 2&#45;&gt;1 -->
<g id="edge2" class="edge">
<title>2&#45;&gt;1</title>
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<!-- 3 -->
<g id="node4" class="node">
<title>3</title>
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<text text-anchor="middle" x="288" y="-231.5" font-family="sans" font-size="10.00">merge_by_clusters</text>
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<!-- 3&#45;&gt;2 -->
<g id="edge3" class="edge">
<title>3&#45;&gt;2</title>
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<!-- 4 -->
<g id="node5" class="node">
<title>4</title>
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<text text-anchor="middle" x="288" y="-303.5" font-family="sans" font-size="10.00">get_clusters</text>
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<!-- 4&#45;&gt;3 -->
<g id="edge4" class="edge">
<title>4&#45;&gt;3</title>
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<polygon fill="grey" stroke="grey" stroke-width="2" points="291.5,-262.1 288,-252.1 284.5,-262.1 291.5,-262.1"/>
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<!-- 5 -->
<g id="node6" class="node">
<title>5</title>
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<text text-anchor="middle" x="288" y="-375.5" font-family="sans" font-size="10.00">filter_cells</text>
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<!-- 5&#45;&gt;4 -->
<g id="edge5" class="edge">
<title>5&#45;&gt;4</title>
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<polygon fill="grey" stroke="grey" stroke-width="2" points="291.5,-334.1 288,-324.1 284.5,-334.1 291.5,-334.1"/>
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<!-- 6 -->
<g id="node7" class="node">
<title>6</title>
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<text text-anchor="middle" x="288" y="-447.5" font-family="sans" font-size="10.00">merge_cells</text>
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<!-- 6&#45;&gt;5 -->
<g id="edge6" class="edge">
<title>6&#45;&gt;5</title>
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<!-- 7 -->
<g id="node8" class="node">
<title>7</title>
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<text text-anchor="middle" x="288" y="-519.5" font-family="sans" font-size="10.00">generate_pileups</text>
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<!-- 7&#45;&gt;6 -->
<g id="edge7" class="edge">
<title>7&#45;&gt;6</title>
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<!-- 8 -->
<g id="node9" class="node">
<title>8</title>
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<text text-anchor="middle" x="288" y="-591.5" font-family="sans" font-size="10.00">qc_vcf_1</text>
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<!-- 8&#45;&gt;7 -->
<g id="edge8" class="edge">
<title>8&#45;&gt;7</title>
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<!-- 9 -->
<g id="node10" class="node">
<title>9</title>
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<!-- 9&#45;&gt;8 -->
<g id="edge9" class="edge">
<title>9&#45;&gt;8</title>
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<!-- 10 -->
<g id="node11" class="node">
<title>10</title>
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<text text-anchor="middle" x="288" y="-735.5" font-family="sans" font-size="10.00">freebayes_clusters_MT</text>
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<!-- 10&#45;&gt;9 -->
<g id="edge10" class="edge">
<title>10&#45;&gt;9</title>
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<!-- 11 -->
<g id="node12" class="node">
<title>11</title>
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<text text-anchor="middle" x="288" y="-807.5" font-family="sans" font-size="10.00">merge_by_clusters_MT</text>
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<!-- 11&#45;&gt;10 -->
<g id="edge11" class="edge">
<title>11&#45;&gt;10</title>
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<!-- 12 -->
<g id="node13" class="node">
<title>12</title>
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<!-- 12&#45;&gt;11 -->
<g id="edge12" class="edge">
<title>12&#45;&gt;11</title>
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<!-- 13 -->
<g id="node14" class="node">
<title>13</title>
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<!-- 13&#45;&gt;12 -->
<g id="edge13" class="edge">
<title>13&#45;&gt;12</title>
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<!-- 14 -->
<g id="node15" class="node">
<title>14</title>
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<text text-anchor="middle" x="288" y="-1023.5" font-family="sans" font-size="10.00">merge_cells_MT</text>
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<!-- 14&#45;&gt;13 -->
<g id="edge14" class="edge">
<title>14&#45;&gt;13</title>
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<!-- 15 -->
<g id="node16" class="node">
<title>15</title>
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<!-- 15&#45;&gt;14 -->
<g id="edge15" class="edge">
<title>15&#45;&gt;14</title>
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<!-- 16 -->
<g id="node17" class="node">
<title>16</title>
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<!-- 16&#45;&gt;15 -->
<g id="edge16" class="edge">
<title>16&#45;&gt;15</title>
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<!-- 17 -->
<g id="node18" class="node">
<title>17</title>
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<!-- 17&#45;&gt;16 -->
<g id="edge18" class="edge">
<title>17&#45;&gt;16</title>
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<!-- 18 -->
<g id="node19" class="node">
<title>18</title>
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<!-- 18&#45;&gt;17 -->
<g id="edge19" class="edge">
<title>18&#45;&gt;17</title>
<path fill="none" stroke="grey" stroke-width="2" d="M41.47,-1367.98C28.21,-1359.18 14.3,-1347.09 7,-1332 0.03,-1317.6 -2.32,-1309.01 7,-1296 30.27,-1263.51 74.61,-1250.7 110.08,-1245.76"/>
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<!-- 23 -->
<g id="node24" class="node">
<title>23</title>
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<!-- 18&#45;&gt;23 -->
<g id="edge29" class="edge">
<title>18&#45;&gt;23</title>
<path fill="none" stroke="grey" stroke-width="2" d="M76.97,-1367.7C78.29,-1359.98 79.88,-1350.71 81.35,-1342.11"/>
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<!-- 19 -->
<g id="node20" class="node">
<title>19</title>
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<!-- 19&#45;&gt;18 -->
<g id="edge22" class="edge">
<title>19&#45;&gt;18</title>
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<!-- 20 -->
<g id="node21" class="node">
<title>20</title>
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<!-- 19&#45;&gt;20 -->
<g id="edge25" class="edge">
<title>19&#45;&gt;20</title>
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<!-- 22 -->
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<title>22</title>
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