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Developers Guide

Code Organization

The bulk of the FlexFlow source code is stored in the following folders:

  1. examples: example DNNs in C++ and Python
  2. include: the FlexFlow headers
  3. src: the FlexFlow source code
  4. python: bindings for the Python interface

The src folder is divided into the following subfolders:

  1. loss_functions: contains the implementation of all the supported loss functions, as well as the backward function to be used during training.
  2. mapper: contains the implentation of the Legion custom mapper for FlexFlow, FFMapper.
  3. metric_functions: contains the implementation of all the metrics functions, such as accuracy, categorical crossentropy, or mean squared error.
  4. ops: contains the implementation of all tensor operators.
  5. parallel_ops: contains the operators used to represent parallelization on the Parallel Computation Graph (PCG) as described in the Unity paper.
  6. recompile: support for the dynamic recompilation functionality described in this paper
  7. runtime: contains the implementation of the high-level FlexFlow runtime
  8. utils: only contains implementation of the RecordFormatter class.

In many parts of the source code you will see triplets of files with the following three different extensions: .cc, .cpp and .cu. The .cc file contains the main, high-level C++ implementation, whereas the .cpp and .cu file contain, respectively, the HIP and CUDA kernels.

The best way to familiarize with the FlexFlow codebase is to walk through one of the existing examples, then check out the relevant FlexFlow runtime functions that are used in the example. We provide examples in both Python and C++. The Python interface is the most up-to-date, and the one that is intended to be used by users. To learn how to run a DNN in FlexFlow, please refer to the scripts in the examples/python folder. The C++ interface is intended mostly for development purposes and may have some rough edges. Nevertheless, the C++ examples are the preferred ones to look at if you want to familiarize with the internals of the FlexFlow implementation.

AlexNet example (C++)

In this section, we will walk through the AlexNet C++ implementation, which can be found in the examples/cpp/AlexNet folder of the repository. You can use this example as a template to write your own C++ DNN model using FlexFlow.

You can start by taking a look at the alexnet.cc file, containing the core of the implementation. You will notice the absence of a main() function. The FlexFlow C++ interface uses the main() function defined in src/runtime/cpp_driver.cc, so you will not need to create a new one when writing a FlexFlow program. Instead, you will use a function called top_level_task and with the following signature:

void FlexFlow::top_level_task(Task const *task,
                              std::vector<PhysicalRegion> const &regions,
                              Context ctx,
                              Runtime *runtime);

Inside the top_level_task function, you will want to create a FFModel object, which is usually initialized by passing a FFConfig object to the constructor:

FFConfig ffConfig;
FFModel ff(ffConfig);

FFModel is a very large class, and is the cornerstone of every FlexFlow DNN, providing the methods required to instantiate input tensors, add layers, compile the model, etc...

Tensor creation

The typical first step in a FlexFlow DNN is to define the input tensors. You can do that using the FFModel.create_tensor function. In the case of AlexNet:

Tensor input;
{
	int const dims[] = {ffConfig.batchSize, 3, 229, 229};
	input = ff.create_tensor<4>(dims, DT_FLOAT);
}

In the case of AlexNet, the input tensor has dimension batch_size x 3 x 229 x 229, so it is a 4-dimensional tensor. To initialize the tensor, we use the templated create_tensor function, which is part of FFModel. It may be useful to know that the create_tensor function lays out the tensor's dimensions in reverse order. For instance, in the snippet above, printing the input tensor (which can be done using the instruction below) will show dimensions: [229, 229, 3, batch_size].

input->print("input tensor")

There are two versions of the create_tensor function: one (used in the last snippet above) uses a template that takes the number of tensor dimensions as its parameter; the second is a wrapper around the first, and takes the number of tensor dimensions as a regular function parameter. Both versions are implemented in model.cc, and their signature is identical, except for the number of dimensions parameter. Below, we discuss the implementation of the create_tensor wrapper, since it illustrates a common pattern among FlexFlow functions:

Tensor FFModel::create_tensor(int numdim,
                              int const dims[],
                              DataType data_type,
                              Layer const *layer,
                              int idx,
                              bool create_grad) {
  switch (numdim) {
#define DIMFUNC(DIM)                                                           \
  case DIM:                                                                    \
    return create_tensor<DIM>(dims, data_type, layer, idx, create_grad);
    LEGION_FOREACH_N(DIMFUNC)
#undef DIMFUNC
    default:
      assert(false && "Unsupported dim!");
  }
}

The LEGION_FOREACH_N(DIMFUNC) macro is defined in deps/legion/runtime/legion/legion_config.h. The preprocessor replaces the block of code between #define DIMFUNC(DIM) and #undef DIMFUNC with a case statement for each integer between 1 and the LEGION_MAX_DIM, controlled by the Legion_MAX_DIM Legion CMake variable, which in case of FlexFlow, is set equal to FF_MAX_DIM in cmake/legion.cmake. For example, in the default case, where FF_MAX_DIM is set to 4, the preprocessor will rewrite the switch loop above as follows:

switch (numdim) {
	case 1:
		return create_tensor<1>(dims, data_type, layer, idx, create_grad);
	case 2:
		return create_tensor<2>(dims, data_type, layer, idx, create_grad);
	case 3:
		return create_tensor<3>(dims, data_type, layer, idx, create_grad);
	case 4:
		return create_tensor<4>(dims, data_type, layer, idx, create_grad);
	default:
		assert(false && "Unsupported dim!");
}

In addition to the two versions of create_tensor discussed above, model.cc also offers the create_tensor_legion_ordering function, which simply creates a tensor without reversing the order of the input dimensions. The explicit template instantiations at the bottom of model.cc will ensure that functions such create_tensor are only instantiated for number of dimensions that are less or equal to FF_MAX_DIM.

Adding layers to a DNN model

Going back to the AlexNet example, after defining the input tensors, we can add each of the DNN's layers by using the corresponding method from FFModel. For instance, the first layer is added using:

t = ff.conv2d(input, 64, 11, 11, 4, 4, 2, 2, AC_MODE_RELU);

The conv2d function is defined in src/ops/conv_2d.cc. Just like the other FFModel layer functions, it creates a new Layer object, populates with all relevant properties, and then enqueues to the list of layers in the FFModel class.

Optimizer and training metrics

After adding the DNN layers, the next step before compiling the model for training is to initialize an optimizer and then create a vector with all the metrics that you want to monitor at each training step.

Model compilation

Model compilation consists of the following steps:

  1. We initialize an operator for each layer in the model, via the function create_operators_from_layers(). Layers work with Tensor input/weights/outputs, and are created directly by the user when writing a FlexFlow program. Operators work with ParallelTensor objects and they are responsible for running computations by launching kernels on GPUs.
  2. Launch the graph optimize task (GRAPH_OPTIMIZE_TASK_ID), implemented byPCG::Graph::graph_optimize_task, which returns PCG::GraphOptimalViewSerialized
    1. call deserialize_graph_optimal_view(...) to get PCG::Graph *best_graph and std::unordered_map<PCG::Node, MachineView> optimal_views from deserialized PCG::GraphOptimalViewSerialized
    2. convert_graph_to_operators()
    3. print the dot of the best graph obtained
    4. map inputs to parallel tensor and weights to parallel tensor? -> strange for loop to understand better
  3. Init performance metrics via the FFModel::update_metrics_task
  4. Perform inplace optimizations (if enabled)
  5. Loop through the operators to do the following (to be understood better):
    1. parameters.push_back(op->weights[i]); for each weight in each operator
    2. op->map_output_tensors(*this);
    3. ((ParallelOp *)op)->create_input_partition(*this); if the operator is a parallel operator
  6. Check correctness of the operator's input and output tensors' settings
  7. Perform fusion optimizations, if enabled
  8. Print all operators and their input and output regions
  9. Create the tensor for the label
  10. Initialize the optimizer
  11. In training mode, if NCCL is enabled, initialize all the communicators and other objects

Continuous Integration

We currently implement CI testing using Github Workflows. Each workflow is defined by its corresponding YAML file in the .github/workflows folder of the repo. We currently have the following workflows:

  1. build.yml: checks that the build & installation of FlexFlow succeed, using both the CMake and Makefile systems
  2. clang-format-check.yml: ensures that the source code is properly formatted.
  3. docker-build.yml: checks that the Docker containers can build and run FlexFlow properly. It also publishes a new version of the FlexFlow containers to the repo's package register for each push to the master branch
  4. gpu-ci.yml: runs all the tests that require a GPU to run.
  5. gpu-ci-daemon.yml: an helper workflow that turns on/off the GPU instance used by the test above
  6. multinode-test.yml: runs the same GPU tests from the gpu-ci.yml workflow, but using multiple (simulated) nodes. The test currently simulates two nodes, each with 2 GPUs. To run FlexFlow on multiple nodes, we compile Legion with GASNET enabled, and choose MPI as the GASNET conduit. Compared to the single-node version, this test is much more time-consuming (about 4h instead 40mins at the time of writing), so we only run the test on the FlexFlow master branch every other day.
  7. pip-deploy.yml: builds the flexflow pip package and publishes it on TestPyPI (if the repository environment variable DEPLOY_TO_TEST_PYPI is unset, or set to false) or PyPI (if DEPLOY_TO_TEST_PYPI is set to true). When deploying to PyPI, a new git tag (with the pip package version) will also be created, and associated with the commit hash that triggered the workflow. The pip-deploy.yml can only be launched manually via workflow dispatch. More on the pip packaging in the section below.
  8. pip-install.yml: checks the build & installation of FlexFlow using pip
  9. shell-check.yml: runs shellcheck on all bash scripts in the repo

We also have three placeholder workflows: build-skip.yml, docker-build-skip.yml, gpu-ci-skip and pip-install-skip.yml. These always pass and are used only in the case of skipped workflows whose status is required to merge a PR; we implement the "hack" officially recommended by Github (see here).

In the next section, we walk through an example workflow, similar to the ones found in this repo. An important thing to note is that Github workflows do not run unless they are properly linted. If you encounter a formatting/linting error, you can lint your workflow file using prettier (installation instructions here):

yarn prettier --write <filename.yml>

Github Workflow syntax

In this section, we will walk through an example workflow:

name: "build"

on:
  pull_request:
    paths:
      - "src/**"
      - ".github/workflows/build.yml"
  push:
    paths:
      - "src/**"
      - ".github/workflows/build.yml"
    branches:
      - "master"
  schedule:
    # Run weekly on Saturday at midnight PT (3am ET / 8am UTC)
    - cron: "0 8 * * 6"
  workflow_dispatch:

concurrency:
  group: build-${{ github.head_ref || github.run_id }}
  cancel-in-progress: true

jobs:
  cmake-build:
    name: Build FlexFlow with CMake
    runs-on: ubuntu-20.04
    steps:
      - name: Checkout Git Repository
        uses: actions/checkout@v3
        with:
          submodules: recursive

      - name: Install CUDA
        uses: Jimver/[email protected]
        id: cuda-toolkit
        with:
          cuda: "11.8.0"
          # Disable caching of the CUDA binaries, since it does not give us any significant performance improvement
          use-github-cache: "false"

      - name: Install FlexFlow Dependencies
        run: .github/workflows/helpers/install_dependencies.sh

The first instruction in a workflow file sets the workflow's name. The name is not required to be unique, but it is preferrable to use unique names to avoid conflicts.

Next, the on: section allows you to control what events trigger a workflow run. A full list of events that can trigger a workflow run is available here. Each trigger can take options that further filter out the scenarios where the workflow runs. In the example above, we have the following triggers:

  1. A pull_request trigger, triggering a workflow run when a PR is opened, and for each new commit to a branch associated with an open PR. The paths option allows you to choose which files in the repository need to be modified to make the workflow run. For instance, in the example, the pull_request trigger is only activated for PRs where either .github/workflows/build.yml or a file in the src folder is modified.
  2. A push trigger, triggering a run for each push, no matter if there is an open PR or not. Here, in addition to the paths option, we have a branches option, restricting the trigger to activate only for commits to the master branch, but not for commits to other branches.
  3. A schedule trigger, triggering the workflow at specific times. The syntax for chron workflows is explained here.
  4. A workflow_dispatch trigger, enabling authorized users to manually run the workflow.

There are many additional options that are not discussed here. For example, there is a paths-ignore option that allows you to run the workflow in any case except if a file at the specified paths is modified.

Next, the concurrency section allows you to control how many copies of the same workflow can run in parallel. This is useful, for example, when one pushes a new commit to a branch before the workflows for the previous commits have finished running. Since the old commit is now obsolete, there is no need to wait until the old workflow has finished running before running again on the newer commit. In the example above, for example, we use the concurrency section to cancel any queued or in-progress workflow when a newer one is triggered.

Finally, we define the jobs that will run when the workflow is triggered. Each job is specified by adding an indented entry to the jobs: section, and will run in parallel in a isolated container. Multiple jobs in the same workflow do not directly share files. The runs-on option allows you to control what type of runner to use for the job. In the example, we use runs-on: ubuntu-20.04 to run the job on a VM with Ubuntu 20.04. You can also set up the workflow to run on a self-hosted machine by using the option runs-on: self-hosted and following the instructions at this link to connect the self hosted machine to the repository.

Each step in a job will be executed sequentially, and if it fails, the remaining steps will be cancelled and the job will be marked as failed. Each step is specified by either reusing a Github action or running a shell command (or a script file). For instance, in the example above, the first step uses the Github Action actions/checkout@v3 to check out the repository, the second step uses the Jimver/[email protected] action to install CUDA, whereas the third step runs a bash script stored in the repo at the path .github/workflows/helpers/install_dependencies.sh.

Pip packages

This section illustrates how we support the automatic deployment of FlexFlow to the PyPI and Test PyPI repositories. Publishing FlexFlow on PyPI makes it possible for users to install FlexFlow on their machine by simply running:

pip install flexflow

To install from Test PyPI, on the other hand, one can use:

pip install flexflow --extra-index-url https://test.pypi.org/simple/

The installation process currently takes approximately the same time as installing from source by running the command pip install . from FF_HOME after having cloned the repo. However, installing directly from PyPI allows the user to automatically install the Python dependencies, and removes the step of having to manually clone the repo with all its submodules.

Below, we discuss some important properties of PyPI.

Packaging

When building a pip package from a repository, we can decide what files from the repository will be included in the package, and which ones will be left out. To do that, we write a MANIFEST.in file, according to the syntax from the official instructions. In particular, we manually include the submodules (which would otherwise be left out by default), we remove the .git folders, which are not needed to build FlexFlow, as well as the triton folder, whose contents are not currently in use. Finally, we request that the version.txt file, whose role is described in the section below, is included in the package distribution. Because this file is generated at build time, it would be left out by default if we didn't manually include it.

Source VS Wheel distribution

PyPI allows you to upload a source distribution, together with one (or more) binary distributions of your package. A pip package's pre-compiled binary is called a Wheel (formerly, Egg). The advantage of publishing Wheel distributions instead of just the source code is that the installation of the package will be much faster for the user, who will just need to download the binary, and extract its files in the proper locations (all of this is handled automatically when running pip install <package name>). If only the source code is available, on the other hand, pip install <package name> will first need to compile the package, and then install it.

PyPI allows you to upload multiple Wheels to support different Python versions (the Wheel compatible with version of Python installed on the user's machine is downloaded automatically when the user runs pip install <package name>), but unfortunately does not yet support uploading a Wheel for each CUDA version, and automatically downloading the relevant one depending on the user's machine configuration. Instead, one needs to upload a Wheel with a distinct name for each CUDA version, and the user will need to specify the name manually at dowload time. For this reason, to keep things simple, we only publish the source distribution at this moment, and plan to upload Wheels that are specific to each Python version and CUDA version at a later time.

Versioning

PyPI imposes some strict versioning requirements. Among other things, versions need to follow a specific format, and once a given version of a package is published, it can never be replaced. In addition, even if the publisher deletes a version, nobody can never upload a source distribution / Wheel with that same version number again. Finally, when multiple versions of the same package are published, the one with the highest version number (not the one that was uploaded last) will be installed by default.

When publishing a package on PyPI, the version attached to the upload is determined by the setup.py script. You can check which version string will be used by running python setup.py --version.

The simplest way to version a pippackage is to hard-code the version number in the setup.py script, and committing a change to the repository every time the pip package is to be updated. This approach, however, is incompatible with having a script or workflow to automatically update the pip package.

If we intend to deploy the latest code to PyPI automatically, we need a way to automatically assign a properly-formatted version string to the code we want to upload. Further, we need to ensure that the assigned version is (1) different from any version (of the same package) already published on PyPI and (2) larger than any previous version. Finally, a trickier requirement is that: (3) at any point in time, the setup.py script included in a given version of our package should output a version string that exactly matches the version string recorded in the metadata attached to the package's version at publication time. More about this below.

We follow a simple approach to automatically version the latest code: use the publication's date to generate the version string. For example, on Aug 12, 2023, we can use version string 23.08.12. Assuming that we publish at most one version per day, and that we always publish from the same timezone, we will be able to meet requirements (1) and (2). An additional enhancement to be able to support the update of the package more than once per day (which may be needed in development phase, or if a mistake is made), instead of using the day of the month (12 for August 12, 2023) for the sub-sub-version, we use an index that starts at 0 every month, and is incremented by +1 every time we upload a new version of the package within the same calendar month. So if on Aug 12, 2023 we are updating the package for the first time in the month, we will use version string 23.08.0; if later the same day (or any time before Sept 1, 2023) we wish to upload a new version, we will use string 23.08.1, and so forth.

Having illustrated the general versioning policy, we will need to implement it carefully in setup.py to ensure that we meet requirement (3). You can take a look at the compute_version() function to see how this is done in practice. The key realization is that we cannot simply compute today's date (using any of the Python libraries that let us do that) and transform it into a string, nor simply get from PyPI the latest available version of our package, and, if it was published on the same calendar month, increment the sub-subversion by +1 to generate the version string of the new upload. We can best illustrate why we cannot do that with an example:

  • Today, Aug 12, 2023, we wish to upload a new version to PyPI. As we said above, the version string is computed by setup.py. A naive way to do so in setup.py would be to compute the date using date.today(), and transform the year and month into digit form to generate the version (23) and sub-version (08) parts of the version string. We could then check on PyPI what was the latest published version of the package as of today, and if we found that it was, say, 23.08.05, we would use 5+1=6 as the sub-sub-version for the new upload (so the final version string would be 23.08.06).
  • Over the next few days, we upload 3 more versions
  • A week later, on Aug 18, 2023, a user trying to install our package, runs pip install <package name>. To determine which version it should install, the pip install script downloads the most recent X versions of <package name> on the user's machine, and, for each version, re-computes the version string by running python setup.py --version. When the script attempts to recompute the version string on the package 23.08.06 (which we uploaded on Aug 12, 2023), it will reconstruct the version string by replaying the same instructions that were run on Aug. 12, and obtain a different version string, as follows. Using the current date, the user will obtain: version=23, sub-version=08, which match the metadata. Checking the latest version of the package available on PyPI, the script finds version 23.08.09 (there were three more submissions since Aug 12). This will translate to sub-sub-version=9+1=10. Noticing that the version included in the Aug 12 package's metadata (23.08.06) does not match the recomputed version (23.08.10), the script will generate unexpected and undesired behavior.

To prevent accidentally breaking requirement (3) as illustrated in the scenario from the example above, we employ a simple hack: when computing our package's version string for the first time by running setup.py, we save the string to a file, python/flexflow/version.txt, which is added to the .gitignore and as such, never committed to the repo. As long as the version.txt exists, any subsequent run of setup.py will simply read the file, and output the same version string, no matter on which day and/or how many new versions of the package have been uploaded to PyPI since then. When packaging our code to upload it on PyPI, we ensure to delete the version.txt file, compute the version string, and then include the version.txt in the source distribution that we upload to PyPI. In this way, when the user attempts to install the package, pip install will download the most recent available versions, run setup.py from each distribution, and for each distribution, setup.py will always output the correct version string, because it will just read the string recorded in that distribution's version.txt.

Test PyPI

Given all the complexities and restrictions of PyPI, Test PyPI was created as a "copy" of PyPI to be used for testing and for being able to make mistakes without affecting the user, or forever losing the opportunity to use a given package name and/or version. We take advantage of Test PyPI as follows. If we intend to deploy to PyPI, we can first deploy to Test PyPI, check the results, fix any issue, and only later deploy to PyPI. All our pip related scripts in the repo have been designed to support both Test PyPI and PyPI. In order to let setup.py know that it should package a distribution for Test PyPI, one can simply export the following environment variable:

export DEPLOY_TO_TEST_PYPI=true

Conversely, to upload to PyPI, one can either leave DEPLOY_TO_TEST_PYPI unset, or export

export DEPLOY_TO_TEST_PYPI=false

WARNING!!! More likely than not, the latest version of the flexflow package on Test PyPI and PyPI will be out of sync. This is to be expected, because one may need to upload a few drafts on Test PyPI to detect and correct some bugs, before publishing the definitive version on PyPI. Having different latest versions on the two repositories should not cause any issue. However, after uploading to Test PyPI and before uploading to PyPI (or viceversa), it is EXTREMELY IMPORTANT to delete the python/flexflow/version.txt file.

An easy way to avoid forgetting this, is to only deploy on Test PyPI/PyPI using the pip-deploy.yml, which is designed to only upload to one of the two repositories at a given time.

Build vs install dependencies

FlexFlow requires some other Python packages in order to run. In addition, even building FlexFlow requires some packages, and you cannot run setup.py without those build requirements. There is a way for us to specify these install and build requirements in such a way that pip will detect if they are missing, and install them. We record the build requirements in the pyproject.toml file, whereas we specify the installation requirements by passing a list with each package's name to the install_requires key of the setup() function in setup.py. The installation requirements are automatically read from the requirements.txt file.

Contributing to FlexFlow

We want to make contributing to this project as easy and transparent as possible.

Formatting

We use clang-format to format our C++ code. If you make changes to the code and the Clang format CI test is failing, you can lint your code by running: ./scripts/format.sh from the main folder of this repo.

Documenting the code

We follow the Python Docstring conventions for documenting the Python code. We document the C++ code using comments in any of the conventioned supported by Doxygen see here.

Pull Requests

We actively welcome your pull requests.

  1. Fork the repo and create your branch from master.
  2. If you've added code that should be tested, add tests.
  3. If you've changed APIs, update the documentation.
  4. Ensure the test suite passes.
  5. Make sure your code lints.

Issues

We use GitHub issues to track public bugs. Please ensure your description is clear and has sufficient instructions to be able to reproduce the issue.

License

By contributing to FlexFlow, you agree that your contributions will be licensed under the LICENSE file in the root directory of this source tree.