🦠 Model Request: Antimicrobial class specificity prediction

[miquelduranfrigola]

Model Name

Antimicrobial class specificity prediction

Model Description

Prediction of antimicrobial class specificity using simple machine learning methods applied to an antimicrobial knowledge graph. The knowledge graph is built on ChEMBL, Co-ADD and SPARK. Endpoints are broad terms such as activity agains gram-positive or gram-negative bacteria.

Slug

antimicrobial-kg-ml

Tag

Antimicrobial activity

Publication

https://www.biorxiv.org/content/10.1101/2024.12.02.626313v1.full

Source Code

https://github.com/IMI-COMBINE/broad_spectrum_prediction

License

MIT

[miquelduranfrigola]

/approve

[DhanshreeA]

/approve

[github-actions]

New Model Repository Created! 🎉

@miquelduranfrigola ersilia model respository has been successfully created and is available at:

🔗 ersilia-os/eos74km

Next Steps ⭐

Now that your new model respository has been created, you are ready to start contributing to it!

Here are some brief starter steps for contributing to your new model repository:

Note: Many of the bullet points below will have extra links if this is your first time contributing to a GitHub repository

• 🍴 Get started by creating a fork of your new model repository - docs
• 👯 Clone your forked repository - docs
• ✏️ Make edits to your new forked model repository - docs - Edits might include:
  • Updating the README.md file to accurately describe your model
  • Add source code for your model
  • Adding documentation for your model
• 🚀 Open a Pull Request from your forked repository to the original repository. This will allow you to bring your local changes into the new ersilia model repository that was just created! - docs

Additional Resources 📚

• CONTRIBUTING.md
• About Pull Requests
• About Forks

If you have any questions, please feel free to open an issue and get support from the community!

[github-actions]

Workflow Failure ❌

@ (or other maintainers) the /approve workflow has failed. View the logs here for more information:

🔗 Workflow logs

You may need to delete the following repo that was created via this workflow run since the run was not fully successful: ersilia-os/eos2fr7

[miquelduranfrigola]

Note: The eos2fr7 repository has been deleted since the workflow failed.

I am working in the eos74km repository. Actions are failing

[DhanshreeA]

I will update the actions @miquelduranfrigola.