During the Biohackathon we want to work on metadata for publications in the context of BioHackrXiv.org - the markdown based pre-publishing biohackathon platform for project reporting that is used by a handful of biohackathons every year, including the Elixir and Japanese biohackathons. This has resulted in over 40 publications, so far, with 200+ authors. The number of submissions is increasing every year.
In previous years we worked on improved support for publications, including an improved preview/PDF generation experience and CiTO support. Also we mapped out future work for BioHackrXiv in this unpublished doc where we want to improve metadata handling and the publishing system itself. These are obvious topics to work on during the Elixir biohackathon 2023.
A full list of supported hackathons can be found here and a list of publications here.
Previous publications are here.
- Arun Isaac
- Tazro Ohta
- Egon Willighagen (@egonw)
- Toshiaki Katayama
- Gianluca Della Vedova (remote)
- Pjotr Prins
Long term project has been going for years. For plan see abstract above. We would like to be with 2 active team members (Pjotr & Arun) on-site to be able to write code. We will have at least one remote participant (Gianluca) and other experts that are likely in other biohackathon groups (Egon, Tazro, Toshiaki).
Pjotr Prins, Tazro Ohta, Arun Isaac