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updade ncbifam to 16.0
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tgrego committed Nov 29, 2024
1 parent d117c2b commit 77ca0ae
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Showing 4 changed files with 5 additions and 5 deletions.
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Expand Up @@ -145,8 +145,8 @@ binary.mobidb.path=${bin.directory}/mobidb/idrpred-cli.py
mobidb.binary.cpu.switches=--threads 1

# NCBIfam
ncbifam.signature.library.release=15.0
ncbifam.hmm.path=${data.directory}/ncbifam/15.0/ncbifam.hmm
ncbifam.signature.library.release=16.0
ncbifam.hmm.path=${data.directory}/ncbifam/16.0/ncbifam.hmm
hmmer3.hmmsearch.switches.ncbifam=-Z 61295632 --cut_tc
hmmer3.hmmsearch.cpu.switch.ncbifam=--cpu 1

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Expand Up @@ -39,8 +39,8 @@ hamap.profile.models.path=data/hamap/2023_05/hamap.prf
mobidb.signature.library.release=4.0

# NCBIFam
ncbifam.signature.library.release=15.0
ncbifam.hmm.path=data/ncbifam/15.0/ncbifam.hmm
ncbifam.signature.library.release=16.0
ncbifam.hmm.path=data/ncbifam/16.0/ncbifam.hmm

# PANTHER
panther.signature.library.release=19.0
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Expand Up @@ -22,7 +22,7 @@ binary.hmmer3.path=${bin.directory}/hmmer/hmmer3/3.3
antifam.hmm.path=${data.directory}/antifam/7.0/AntiFam.hmm
gene3d.hmm.path=${data.directory}/gene3d/4.3.0/gene3d_main.hmm
hamap.hmm.path=${data.directory}/hamap/2023_05/hamap.hmm.lib
ncbifam.hmm.path=${data.directory}/ncbifam/15.0/ncbifam.hmm
ncbifam.hmm.path=${data.directory}/ncbifam/16.0/ncbifam.hmm
panther.hmm.path=${data.directory}/panther/19.0/famhmm/binHmm
pfam-a.hmm.path=${data.directory}/pfam/37.2/pfam_a.hmm
pirsf.sfhmm.path=${data.directory}/pirsf/3.10/sf_hmm_all
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