From 591b684c03a6c06539d7061805800ef66122a3d7 Mon Sep 17 00:00:00 2001
From: Matthias Blum <mat.blum@gmail.com>
Date: Thu, 15 Feb 2024 20:47:47 +0000
Subject: [PATCH] Fix graph creation

---
 .../management/model/implementations/PrepareForOutputStep.java | 3 +--
 1 file changed, 1 insertion(+), 2 deletions(-)

diff --git a/core/management/src/main/java/uk/ac/ebi/interpro/scan/management/model/implementations/PrepareForOutputStep.java b/core/management/src/main/java/uk/ac/ebi/interpro/scan/management/model/implementations/PrepareForOutputStep.java
index 101e0bfa12..1982efdb94 100644
--- a/core/management/src/main/java/uk/ac/ebi/interpro/scan/management/model/implementations/PrepareForOutputStep.java
+++ b/core/management/src/main/java/uk/ac/ebi/interpro/scan/management/model/implementations/PrepareForOutputStep.java
@@ -1121,7 +1121,7 @@ public int compare(Domain d1, Domain d2) {
 
                 for (int j = 0; j < bestDomainsInGroup.size(); j++) {
                     if (i != j) {
-                        edges.add(i);
+                        edges.add(j);
                     }
                 }
 
@@ -1142,7 +1142,6 @@ public int compare(Domain d1, Domain d2) {
             }
 
             List<Set<Integer>> subgroups = new DomainResolver(graph).resolve();
-
             int maxCoverage = 0;
             int maxPfams = 0;
             List<Domain> bestSubgroup = null;