Skip errors in coverage of example notebooks

.gitignore

@@ -74,3 +74,4 @@ docs/_build
 *.bak
 .vscode/settings.json
 *.code-workspace
+xunit-result.xml

pyproject.toml

@@ -115,7 +115,7 @@ format = ["black .", "isort .", "lint",]
 test = ["pytest -n auto --dist worksteal ./src/ ./tests/",]
 fast-test = ["pytest -n auto --dist worksteal ./tests/ -m \"not slow\"",]
 coverage = [
-  "pytest --cov --cov-report term --cov-report xml --junitxml=xunit-result.xml tests/",
+  "pytest --cov --cov-report term --cov-report xml --cov-branch --junitxml=xunit-result.xml tests/",
 ]
 
 [tool.hatch.envs.docs]
@@ -145,27 +145,27 @@ markers = [
 select = [  # It would be nice to have the commented out checks working.
   "E",  # pycodestyle
   "F",  # pyflakes
-  # "B",  # flake8-bugbear
-  # "D",  # pydocstyle
+  "B",  # flake8-bugbear
+  "D",  # pydocstyle
   # "C90",  # mccabe complexity
   # "N",  # PEP8-naming
   "UP",  # pyupgrade (upgrade syntax to current syntax)
   "PLE",  # Pylint error https://github.com/charliermarsh/ruff#error-ple
   # "PLR",  # Pylint refactor (e.g. too-many-arguments)
-  # "PLW",  # Pylint warning (useless-else-on-loop)
+  "PLW",  # Pylint warning (useless-else-on-loop)
 ]
 extend-select = [
-  # "D401",  # First line should be in imperative mood
-  # "D400",  # First line should end in a period.
-  # "D404",  # First word of the docstring should not be "This"
+  "D401",  # First line should be in imperative mood
+  "D400",  # First line should end in a period.
+  "D404",  # First word of the docstring should not be "This"
   "TID252",  # No relative imports (not pep8 compliant)
 ]
 ignore = [
   "PLR2004",  # magic value used in comparson
   "E501",  # Line too long (want to have fixed
 ]
 # Allow autofix for all enabled rules (when `--fix`) is provided.
-fixable = ["E", "F", "UP", "PLE"]
+fixable = ["E", "F", "UP", "PLE", "D"]
 unfixable = []
 line-length = 88
 exclude = ["docs", "build"]

src/dtscalibration/dts_accessor.py

@@ -2411,36 +2411,6 @@ def average_monte_carlo_double_ended(
         -------
 
         """
-
-        # def create_da_ta2(no, i_splice, direction="fw", chunks=None):
-        #     """create mask array mc, o, nt"""
-
-        #     if direction == "fw":
-        #         arr = da.concatenate(
-        #             (
-        #                 da.zeros((1, i_splice, 1), chunks=(1, i_splice, 1), dtype=bool),
-        #                 da.ones(
-        #                     (1, no - i_splice, 1),
-        #                     chunks=(1, no - i_splice, 1),
-        #                     dtype=bool,
-        #                 ),
-        #             ),
-        #             axis=1,
-        #         ).rechunk((1, chunks[1], 1))
-        #     else:
-        #         arr = da.concatenate(
-        #             (
-        #                 da.ones((1, i_splice, 1), chunks=(1, i_splice, 1), dtype=bool),
-        #                 da.zeros(
-        #                     (1, no - i_splice, 1),
-        #                     chunks=(1, no - i_splice, 1),
-        #                     dtype=bool,
-        #                 ),
-        #             ),
-        #             axis=1,
-        #         ).rechunk((1, chunks[1], 1))
-        #     return arr
-
         out = xr.Dataset(
             coords={"x": self.x, "time": self.time, "trans_att": result["trans_att"]}
         ).copy()