pkgcheck results - main

[github-actions]

Checks for tidyterra (v0.4.0)

git hash: aa5eeb01

• ✔️ Package is already on CRAN.
• ✔️ has a 'codemeta.json' file.
• ✔️ has a 'contributing' file.
• ✖️ The following function has no documented return value: [summarise.SpatVector]
• ✔️ uses 'roxygen2'.
• ✔️ 'DESCRIPTION' has a URL field.
• ✔️ 'DESCRIPTION' has a BugReports field.
• ✔️ Package has at least one HTML vignette
• ✔️ All functions have examples.
• ✔️ Package has continuous integration checks.
• ✔️ Package coverage is 99.3%.
• ✔️ R CMD check found no errors.
• ✔️ R CMD check found no warnings.
• 👀 Function names are duplicated in other packages

Important: All failing checks above must be addressed prior to proceeding

(Checks marked with 👀 may be optionally addressed.)

Package License: MIT + file LICENSE

---

1. Package Dependencies

Details of Package Dependency Usage (click to open)

The table below tallies all function calls to all packages ('ncalls'), both internal (r-base + recommended, along with the package itself), and external (imported and suggested packages). 'NA' values indicate packages to which no identified calls to R functions could be found. Note that these results are generated by an automated code-tagging system which may not be entirely accurate.

type	package	ncalls
internal	base	498
internal	tidyterra	236
internal	grDevices	71
internal	stats	50
internal	graphics	5
imports	dplyr	95
imports	ggplot2	57
imports	terra	56
imports	tibble	36
imports	sf	16
imports	scales	11
imports	tidyr	7
imports	rlang	6
imports	cli	5
imports	data.table	3
suggests	isoband	NA
suggests	knitr	NA
suggests	lifecycle	NA
suggests	maptiles	NA
suggests	rmarkdown	NA
suggests	s2	NA
suggests	testthat	NA
suggests	vdiffr	NA
linking_to	NA	NA

Click below for tallies of functions used in each package. Locations of each call within this package may be generated locally by running 's <- pkgstats::pkgstats(<path/to/repo>)', and examining the 'external_calls' table.

base

c (29), by (28), range (26), names (25), nrow (22), lapply (21), as.character (20), length (20), as.integer (19), seq_len (17), sort (15), setdiff (14), unique (14), attributes (13), drop (13), seq (10), levels (9), ncol (9), unlist (9), vapply (9), cbind (8), lengths (8), list (8), replace (8), rev (8), for (7), data.frame (6), max (6), min (6), as.data.frame (5), diff (5), all (4), as.list (4), attr (4), class (4), factor (4), integer (4), mean (4), rep (4), do.call (3), matrix (3), round (3), as.double (2), as.numeric (2), as.vector (2), character (2), format (2), gsub (2), is.na (2), is.numeric (2), logical (2), paste (2), seq_along (2), sprintf (2), sum (2), switch (2), tolower (2), any (1), as.logical (1), as.matrix (1), is.factor (1), make.names (1), q (1), remove (1), signif (1), unname (1), which (1)

tidyterra

extract_pal (18), as_tbl_internal (15), make_safe_index (12), as_spat_internal (11), as_coordinates (10), pull_crs (9), cross_blended_hypsometric_tints_db (6), hypsometric_tints_db (6), compute_group (4), compute_layer (4), pivot_longer_spat (4), tidyterra_ramp (4), isoband_z_matrix (3), override_aesthetics (3), prepare_aes_spatraster (3), cleanup_aesthetics (2), cross_blended.colors (2), cross_blended.colors2 (2), hypso.colors (2), hypso.colors2 (2), iso_to_path (2), iso_to_polygon (2), make_hexcol (2), restore_attr (2), terrain_pal (2), tidyterra_ramp2 (2), wiki_pal (2), across_all_of (1), allow_lambda (1), anti_join.SpatVector (1), arrange.SpatVector (1), as_sf (1), as_spatrast_attr (1), as_spatraster (1), as_spatvect_attr (1), as_spatvector (1), as_spatvector.data.frame (1), as_spatvector.sf (1), as_spatvector.sfc (1), as_spatvector.SpatVector (1), as_tbl_spat_attr (1), as_tbl_vector_internal (1), as_tibble.SpatRaster (1), as_tibble.SpatVector (1), autoplot.SpatRaster (1), autoplot.SpatVector (1), bind_spat_cols (1), bind_spat_rows (1), check_mixed_cols (1), check_regroups (1), compare_spatrasters (1), contour_breaks (1), count.SpatVector (1), cross_blended_pal (1), cross_blended_pal2 (1), crs_compare (1), distinct.SpatVector (1), draw_panel (1), drop_na.SpatRaster (1), drop_na.SpatVector (1), error_spat_join (1), filter.SpatRaster (1), filter.SpatVector (1), fortify.SpatRaster (1), fortify.SpatVector (1), full_join.SpatVector (1), geom_spatraster (1), geom_spatraster_contour (1), geom_spatraster_contour_filled (1), geom_spatraster_rgb (1), geom_spatvector (1), geom_spatvector_label (1), geom_spatvector_text (1), glimpse.SpatRaster (1), glimpse.SpatVector (1), group_by.SpatVector (1), group_data.SpatVector (1), group_indices.SpatVector (1), group_keys.SpatVector (1), group_prepare_spat (1), group_size.SpatVector (1), group_vars.SpatVector (1), groups.SpatVector (1), hypso_pal (1), hypso_pal2 (1), inner_join.SpatVector (1), is_grouped_spatvector (1), is_regular_grid (1), is_rowwise_df (1), is_rowwise_spatvector (1), left_join.SpatVector (1), make_safe_names (1), mutate.SpatRaster (1), mutate.SpatVector (1), n_groups.SpatVector (1), pretty_isoband_levels (1), pull.SpatRaster (1), pull.SpatVector (1), relocate.SpatRaster (1), relocate.SpatVector (1), remove_columns (1), rename_with.SpatRaster (1), rename_with.SpatVector (1), rename.SpatRaster (1), rename.SpatVector (1), replace_na.SpatRaster (1), replace_na.SpatVector (1), reproject_raster_on_stat (1), resample_spat (1), right_join.SpatVector (1), rowwise.SpatVector (1), scale_colour_cross_blended_b (1), scale_colour_cross_blended_c (1), scale_colour_cross_blended_d (1), scale_colour_cross_blended_tint_b (1), scale_colour_cross_blended_tint_c (1), scale_colour_cross_blended_tint_d (1), scale_colour_hypso_b (1), scale_colour_hypso_c (1), scale_colour_hypso_d (1), scale_colour_hypso_tint_b (1), slice_cols (1), slice_rows (1), whitebox.colors (1), wiki.colors (1), xyz_to_isobands (1), xyz_to_isolines (1)

dplyr

left_join (9), select (9), group_vars (7), groups (7), bind_cols (6), slice (6), count (5), inner_join (4), everything (2), filter (2), group_by (2), mutate (2), relocate (2), rename (2), rename_with (2), slice_head (2), slice_max (2), slice_min (2), slice_sample (2), slice_tail (2), tally (2), transmute (2), ungroup (2), all_of (1), anti_join (1), arrange (1), bind_rows (1), distinct (1), full_join (1), group_size (1), pull (1), right_join (1), rowwise (1), semi_join (1), summarise (1)

grDevices

palette (45), colors (23), as.raster (2), terrain.colors (1)

ggplot2

alpha (18), aes (15), after_stat (8), ggproto (6), layer (5), ggplot (2), resolution (2), GeomRaster (1)

terra

as.data.frame (11), nlyr (10), aggregate (7), vect (7), subset (4), rast (3), crs (2), ext (2), minmax (2), ncell (2), project (2), res (2), rowColFromCell (1), trim (1)

stats

df (43), dist (3), end (2), var (2)

tibble

as_tibble (30), tibble (6)

sf

st_point (5), st_sfc (5), st_as_sf (2), st_as_text (1), st_drop_geometry (1), st_geometry (1), st_is_empty (1)

scales

rescale (8), gradient_n_pal (2), colour_ramp (1)

tidyr

drop_na (4), replace_na (2), pivot_longer (1)

rlang

list2 (4), as_label (2)

cli

cli_bullets (4), style_bold (1)

graphics

layout (4), title (1)

data.table

as.data.table (3)

---

2. Statistical Properties

This package features some noteworthy statistical properties which may need to be clarified by a handling editor prior to progressing.

Details of statistical properties (click to open)

The package has:

• code in R (100% in 47 files) and
• 1 authors
• 4 vignettes
• 3 internal data files
• 11 imported packages
• 161 exported functions (median 11 lines of code)
• 292 non-exported functions in R (median 15 lines of code)

---

Statistical properties of package structure as distributional percentiles in relation to all current CRAN packages
The following terminology is used:

• loc = "Lines of Code"
• fn = "function"
• exp/not_exp = exported / not exported

All parameters are explained as tooltips in the locally-rendered HTML version of this report generated by the checks_to_markdown() function

The final measure (fn_call_network_size) is the total number of calls between functions (in R), or more abstract relationships between code objects in other languages. Values are flagged as "noteworthy" when they lie in the upper or lower 5th percentile.

measure	value	percentile	noteworthy
files_R	47	95.1
files_vignettes	7	98.5
files_tests	52	99.2
loc_R	3682	92.8
loc_vignettes	1017	91.0
loc_tests	6689	98.7	TRUE
num_vignettes	4	96.6	TRUE
data_size_total	68032	81.2
data_size_median	6432	76.2
n_fns_r	453	96.8	TRUE
n_fns_r_exported	161	97.8	TRUE
n_fns_r_not_exported	292	96.2	TRUE
n_fns_per_file_r	5	67.8
num_params_per_fn	4	54.6
loc_per_fn_r	12	36.1
loc_per_fn_r_exp	11	25.1
loc_per_fn_r_not_exp	15	49.5
rel_whitespace_R	32	96.6	TRUE
rel_whitespace_vignettes	26	90.2
rel_whitespace_tests	45	99.8	TRUE
doclines_per_fn_exp	173	97.9	TRUE
doclines_per_fn_not_exp	0	0.0	TRUE
fn_call_network_size	279	91.6

---

2a. Network visualisation

An interactive visualisation of calls between objects in the package has been uploaded as a workflow artefact. To view it, click on results from the latest 'pkgcheck' action, scroll to the bottom, and click on the 'visual-network' artefact.

---

3. goodpractice and other checks

Details of goodpractice checks (click to open)

3a. Continuous Integration Badges

GitHub Workflow Results

id	name	conclusion	sha	run_number	date
5713075531	Clean pkgdown manually	success	238cb2	28	2023-07-31
5713398923	CRAN Status Monitor	success	238cb2	73	2023-07-31
5731360721	lintr	success	aa5eeb	4	2023-08-01
5731479882	pages build and deployment	success	6cd54c	263	2023-08-01
5731366868	pkgcheck	NA	aa5eeb	1	2023-08-01
5731360724	pkgdown-gh-pages	success	aa5eeb	205	2023-08-01
5731360725	R-CMD-check	success	aa5eeb	442	2023-08-01
5726041115	R-CMD-check-terra-devel	failure	fc5871	101	2023-08-01
5731360740	test-coverage	success	aa5eeb	314	2023-08-01

---

3b. goodpractice results

R CMD check with rcmdcheck

rcmdcheck found no errors, warnings, or notes

Test coverage with covr

Package coverage: 99.32

Cyclocomplexity with cyclocomp

Error : Failed to install 'tidyterra' from local:
can't convert package data.table with RemoteType 'any' to remote

Static code analyses with lintr

lintr found the following 39 potential issues:

message	number of times
Avoid library() and require() calls in packages	31
Lines should not be more than 80 characters.	8

---

4. Other Checks

Details of other checks (click to open)

✖️ The following 2 function names are duplicated in other packages:

• • as_sf from rmapzen
• • slice_rows from purrrlyr

---

Package Versions

package	version
pkgstats	0.1.3.4
pkgcheck	0.1.2.1

[github-actions]

Checks for tidyterra (v0.4.0)

git hash: 395c1d1d

• ✔️ Package is already on CRAN.
• ✔️ has a 'codemeta.json' file.
• ✔️ has a 'contributing' file.
• ✔️ uses 'roxygen2'.
• ✔️ 'DESCRIPTION' has a URL field.
• ✔️ 'DESCRIPTION' has a BugReports field.
• ✔️ Package has at least one HTML vignette
• ✔️ All functions have examples.
• ✔️ Package has continuous integration checks.
• ✔️ Package coverage is 99.3%.
• ✔️ R CMD check found no errors.
• ✔️ R CMD check found no warnings.
• 👀 Function names are duplicated in other packages

(Checks marked with 👀 may be optionally addressed.)

Package License: MIT + file LICENSE

---

1. Package Dependencies

Details of Package Dependency Usage (click to open)

The table below tallies all function calls to all packages ('ncalls'), both internal (r-base + recommended, along with the package itself), and external (imported and suggested packages). 'NA' values indicate packages to which no identified calls to R functions could be found. Note that these results are generated by an automated code-tagging system which may not be entirely accurate.

type	package	ncalls
internal	base	498
internal	tidyterra	236
internal	grDevices	71
internal	stats	50
internal	graphics	5
imports	dplyr	95
imports	ggplot2	57
imports	terra	56
imports	tibble	36
imports	sf	16
imports	scales	11
imports	tidyr	7
imports	rlang	6
imports	cli	5
imports	data.table	3
suggests	isoband	NA
suggests	knitr	NA
suggests	lifecycle	NA
suggests	maptiles	NA
suggests	rmarkdown	NA
suggests	s2	NA
suggests	testthat	NA
suggests	vdiffr	NA
linking_to	NA	NA

Click below for tallies of functions used in each package. Locations of each call within this package may be generated locally by running 's <- pkgstats::pkgstats(<path/to/repo>)', and examining the 'external_calls' table.

base

c (29), by (28), range (26), names (25), nrow (22), lapply (21), as.character (20), length (20), as.integer (19), seq_len (17), sort (15), setdiff (14), unique (14), attributes (13), drop (13), seq (10), levels (9), ncol (9), unlist (9), vapply (9), cbind (8), lengths (8), list (8), replace (8), rev (8), for (7), data.frame (6), max (6), min (6), as.data.frame (5), diff (5), all (4), as.list (4), attr (4), class (4), factor (4), integer (4), mean (4), rep (4), do.call (3), matrix (3), round (3), as.double (2), as.numeric (2), as.vector (2), character (2), format (2), gsub (2), is.na (2), is.numeric (2), logical (2), paste (2), seq_along (2), sprintf (2), sum (2), switch (2), tolower (2), any (1), as.logical (1), as.matrix (1), is.factor (1), make.names (1), q (1), remove (1), signif (1), unname (1), which (1)

tidyterra

extract_pal (18), as_tbl_internal (15), make_safe_index (12), as_spat_internal (11), as_coordinates (10), pull_crs (9), cross_blended_hypsometric_tints_db (6), hypsometric_tints_db (6), compute_group (4), compute_layer (4), pivot_longer_spat (4), tidyterra_ramp (4), isoband_z_matrix (3), override_aesthetics (3), prepare_aes_spatraster (3), cleanup_aesthetics (2), cross_blended.colors (2), cross_blended.colors2 (2), hypso.colors (2), hypso.colors2 (2), iso_to_path (2), iso_to_polygon (2), make_hexcol (2), restore_attr (2), terrain_pal (2), tidyterra_ramp2 (2), wiki_pal (2), across_all_of (1), allow_lambda (1), anti_join.SpatVector (1), arrange.SpatVector (1), as_sf (1), as_spatrast_attr (1), as_spatraster (1), as_spatvect_attr (1), as_spatvector (1), as_spatvector.data.frame (1), as_spatvector.sf (1), as_spatvector.sfc (1), as_spatvector.SpatVector (1), as_tbl_spat_attr (1), as_tbl_vector_internal (1), as_tibble.SpatRaster (1), as_tibble.SpatVector (1), autoplot.SpatRaster (1), autoplot.SpatVector (1), bind_spat_cols (1), bind_spat_rows (1), check_mixed_cols (1), check_regroups (1), compare_spatrasters (1), contour_breaks (1), count.SpatVector (1), cross_blended_pal (1), cross_blended_pal2 (1), crs_compare (1), distinct.SpatVector (1), draw_panel (1), drop_na.SpatRaster (1), drop_na.SpatVector (1), error_spat_join (1), filter.SpatRaster (1), filter.SpatVector (1), fortify.SpatRaster (1), fortify.SpatVector (1), full_join.SpatVector (1), geom_spatraster (1), geom_spatraster_contour (1), geom_spatraster_contour_filled (1), geom_spatraster_rgb (1), geom_spatvector (1), geom_spatvector_label (1), geom_spatvector_text (1), glimpse.SpatRaster (1), glimpse.SpatVector (1), group_by.SpatVector (1), group_data.SpatVector (1), group_indices.SpatVector (1), group_keys.SpatVector (1), group_prepare_spat (1), group_size.SpatVector (1), group_vars.SpatVector (1), groups.SpatVector (1), hypso_pal (1), hypso_pal2 (1), inner_join.SpatVector (1), is_grouped_spatvector (1), is_regular_grid (1), is_rowwise_df (1), is_rowwise_spatvector (1), left_join.SpatVector (1), make_safe_names (1), mutate.SpatRaster (1), mutate.SpatVector (1), n_groups.SpatVector (1), pretty_isoband_levels (1), pull.SpatRaster (1), pull.SpatVector (1), relocate.SpatRaster (1), relocate.SpatVector (1), remove_columns (1), rename_with.SpatRaster (1), rename_with.SpatVector (1), rename.SpatRaster (1), rename.SpatVector (1), replace_na.SpatRaster (1), replace_na.SpatVector (1), reproject_raster_on_stat (1), resample_spat (1), right_join.SpatVector (1), rowwise.SpatVector (1), scale_colour_cross_blended_b (1), scale_colour_cross_blended_c (1), scale_colour_cross_blended_d (1), scale_colour_cross_blended_tint_b (1), scale_colour_cross_blended_tint_c (1), scale_colour_cross_blended_tint_d (1), scale_colour_hypso_b (1), scale_colour_hypso_c (1), scale_colour_hypso_d (1), scale_colour_hypso_tint_b (1), slice_cols (1), slice_rows (1), whitebox.colors (1), wiki.colors (1), xyz_to_isobands (1), xyz_to_isolines (1)

dplyr

left_join (9), select (9), group_vars (7), groups (7), bind_cols (6), slice (6), count (5), inner_join (4), everything (2), filter (2), group_by (2), mutate (2), relocate (2), rename (2), rename_with (2), slice_head (2), slice_max (2), slice_min (2), slice_sample (2), slice_tail (2), tally (2), transmute (2), ungroup (2), all_of (1), anti_join (1), arrange (1), bind_rows (1), distinct (1), full_join (1), group_size (1), pull (1), right_join (1), rowwise (1), semi_join (1), summarise (1)

grDevices

palette (45), colors (23), as.raster (2), terrain.colors (1)

ggplot2

alpha (18), aes (15), after_stat (8), ggproto (6), layer (5), ggplot (2), resolution (2), GeomRaster (1)

terra

as.data.frame (11), nlyr (10), aggregate (7), vect (7), subset (4), rast (3), crs (2), ext (2), minmax (2), ncell (2), project (2), res (2), rowColFromCell (1), trim (1)

stats

df (43), dist (3), end (2), var (2)

tibble

as_tibble (30), tibble (6)

sf

st_point (5), st_sfc (5), st_as_sf (2), st_as_text (1), st_drop_geometry (1), st_geometry (1), st_is_empty (1)

scales

rescale (8), gradient_n_pal (2), colour_ramp (1)

tidyr

drop_na (4), replace_na (2), pivot_longer (1)

rlang

list2 (4), as_label (2)

cli

cli_bullets (4), style_bold (1)

graphics

layout (4), title (1)

data.table

as.data.table (3)

---

2. Statistical Properties

This package features some noteworthy statistical properties which may need to be clarified by a handling editor prior to progressing.

Details of statistical properties (click to open)

The package has:

• code in R (100% in 47 files) and
• 1 authors
• 4 vignettes
• 3 internal data files
• 11 imported packages
• 161 exported functions (median 11 lines of code)
• 292 non-exported functions in R (median 15 lines of code)

---

Statistical properties of package structure as distributional percentiles in relation to all current CRAN packages
The following terminology is used:

• loc = "Lines of Code"
• fn = "function"
• exp/not_exp = exported / not exported

All parameters are explained as tooltips in the locally-rendered HTML version of this report generated by the checks_to_markdown() function

The final measure (fn_call_network_size) is the total number of calls between functions (in R), or more abstract relationships between code objects in other languages. Values are flagged as "noteworthy" when they lie in the upper or lower 5th percentile.

measure	value	percentile	noteworthy
files_R	47	95.1
files_vignettes	7	98.5
files_tests	52	99.2
loc_R	3682	92.8
loc_vignettes	1015	90.9
loc_tests	6689	98.7	TRUE
num_vignettes	4	96.6	TRUE
data_size_total	69709	81.4
data_size_median	8120	77.8
n_fns_r	453	96.8	TRUE
n_fns_r_exported	161	97.8	TRUE
n_fns_r_not_exported	292	96.2	TRUE
n_fns_per_file_r	5	67.8
num_params_per_fn	4	54.6
loc_per_fn_r	12	36.1
loc_per_fn_r_exp	11	25.1
loc_per_fn_r_not_exp	15	49.5
rel_whitespace_R	32	96.6	TRUE
rel_whitespace_vignettes	26	90.2
rel_whitespace_tests	45	99.8	TRUE
doclines_per_fn_exp	173	97.9	TRUE
doclines_per_fn_not_exp	0	0.0	TRUE
fn_call_network_size	279	91.6

---

2a. Network visualisation

An interactive visualisation of calls between objects in the package has been uploaded as a workflow artefact. To view it, click on results from the latest 'pkgcheck' action, scroll to the bottom, and click on the 'visual-network' artefact.

---

3. goodpractice and other checks

Details of goodpractice checks (click to open)

3a. Continuous Integration Badges

GitHub Workflow Results

id	name	conclusion	sha	run_number	date
5731737025	lintr	success	0e9be1	6	2023-08-01
5731895606	pages build and deployment	success	88d6df	265	2023-08-01
5731895772	pkgcheck	NA	395c1d	2	2023-08-01
5731705055	pkgdown-gh-pages	success	60a36c	206	2023-08-01
5731737026	R-CMD-check	success	0e9be1	444	2023-08-01
5726041115	R-CMD-check-terra-devel	failure	fc5871	101	2023-08-01
5731737031	test-coverage	success	0e9be1	316	2023-08-01
5731709672	update-docs	success	60a36c	63	2023-08-01

---

3b. goodpractice results

R CMD check with rcmdcheck

rcmdcheck found no errors, warnings, or notes

Test coverage with covr

Package coverage: 99.32

Cyclocomplexity with cyclocomp

Error : Failed to install 'tidyterra' from local:
can't convert package data.table with RemoteType 'any' to remote

Static code analyses with lintr

lintr found the following 39 potential issues:

message	number of times
Avoid library() and require() calls in packages	31
Lines should not be more than 80 characters.	8

---

4. Other Checks

Details of other checks (click to open)

✖️ The following 2 function names are duplicated in other packages:

• • as_sf from rmapzen
• • slice_rows from purrrlyr

---

Package Versions

package	version
pkgstats	0.1.3.4
pkgcheck	0.1.2.1

[github-actions]

Checks for tidyterra (v0.4.0)

git hash: 4cd0c7a1

• ✔️ Package is already on CRAN.
• ✔️ has a 'codemeta.json' file.
• ✔️ has a 'contributing' file.
• ✔️ uses 'roxygen2'.
• ✔️ 'DESCRIPTION' has a URL field.
• ✔️ 'DESCRIPTION' has a BugReports field.
• ✔️ Package has at least one HTML vignette
• ✔️ All functions have examples.
• ✔️ Package has continuous integration checks.
• ✔️ Package coverage is 99.3%.
• ✔️ R CMD check found no errors.
• ✔️ R CMD check found no warnings.
• 👀 Function names are duplicated in other packages

(Checks marked with 👀 may be optionally addressed.)

Package License: MIT + file LICENSE

---

1. Package Dependencies

Details of Package Dependency Usage (click to open)

The table below tallies all function calls to all packages ('ncalls'), both internal (r-base + recommended, along with the package itself), and external (imported and suggested packages). 'NA' values indicate packages to which no identified calls to R functions could be found. Note that these results are generated by an automated code-tagging system which may not be entirely accurate.

type	package	ncalls
internal	base	498
internal	tidyterra	236
internal	grDevices	71
internal	stats	50
internal	graphics	5
imports	dplyr	95
imports	ggplot2	57
imports	terra	56
imports	tibble	36
imports	sf	16
imports	scales	11
imports	tidyr	7
imports	rlang	6
imports	cli	5
imports	data.table	3
suggests	isoband	NA
suggests	knitr	NA
suggests	lifecycle	NA
suggests	maptiles	NA
suggests	rmarkdown	NA
suggests	s2	NA
suggests	testthat	NA
suggests	vdiffr	NA
linking_to	NA	NA

Click below for tallies of functions used in each package. Locations of each call within this package may be generated locally by running 's <- pkgstats::pkgstats(<path/to/repo>)', and examining the 'external_calls' table.

base

c (29), by (28), range (26), names (25), nrow (22), lapply (21), as.character (20), length (20), as.integer (19), seq_len (17), sort (15), setdiff (14), unique (14), attributes (13), drop (13), seq (10), levels (9), ncol (9), unlist (9), vapply (9), cbind (8), lengths (8), list (8), replace (8), rev (8), for (7), data.frame (6), max (6), min (6), as.data.frame (5), diff (5), all (4), as.list (4), attr (4), class (4), factor (4), integer (4), mean (4), rep (4), do.call (3), matrix (3), round (3), as.double (2), as.numeric (2), as.vector (2), character (2), format (2), gsub (2), is.na (2), is.numeric (2), logical (2), paste (2), seq_along (2), sprintf (2), sum (2), switch (2), tolower (2), any (1), as.logical (1), as.matrix (1), is.factor (1), make.names (1), q (1), remove (1), signif (1), unname (1), which (1)

tidyterra

extract_pal (18), as_tbl_internal (15), make_safe_index (12), as_spat_internal (11), as_coordinates (10), pull_crs (9), cross_blended_hypsometric_tints_db (6), hypsometric_tints_db (6), compute_group (4), compute_layer (4), pivot_longer_spat (4), tidyterra_ramp (4), isoband_z_matrix (3), override_aesthetics (3), prepare_aes_spatraster (3), cleanup_aesthetics (2), cross_blended.colors (2), cross_blended.colors2 (2), hypso.colors (2), hypso.colors2 (2), iso_to_path (2), iso_to_polygon (2), make_hexcol (2), restore_attr (2), terrain_pal (2), tidyterra_ramp2 (2), wiki_pal (2), across_all_of (1), allow_lambda (1), anti_join.SpatVector (1), arrange.SpatVector (1), as_sf (1), as_spatrast_attr (1), as_spatraster (1), as_spatvect_attr (1), as_spatvector (1), as_spatvector.data.frame (1), as_spatvector.sf (1), as_spatvector.sfc (1), as_spatvector.SpatVector (1), as_tbl_spat_attr (1), as_tbl_vector_internal (1), as_tibble.SpatRaster (1), as_tibble.SpatVector (1), autoplot.SpatRaster (1), autoplot.SpatVector (1), bind_spat_cols (1), bind_spat_rows (1), check_mixed_cols (1), check_regroups (1), compare_spatrasters (1), contour_breaks (1), count.SpatVector (1), cross_blended_pal (1), cross_blended_pal2 (1), crs_compare (1), distinct.SpatVector (1), draw_panel (1), drop_na.SpatRaster (1), drop_na.SpatVector (1), error_spat_join (1), filter.SpatRaster (1), filter.SpatVector (1), fortify.SpatRaster (1), fortify.SpatVector (1), full_join.SpatVector (1), geom_spatraster (1), geom_spatraster_contour (1), geom_spatraster_contour_filled (1), geom_spatraster_rgb (1), geom_spatvector (1), geom_spatvector_label (1), geom_spatvector_text (1), glimpse.SpatRaster (1), glimpse.SpatVector (1), group_by.SpatVector (1), group_data.SpatVector (1), group_indices.SpatVector (1), group_keys.SpatVector (1), group_prepare_spat (1), group_size.SpatVector (1), group_vars.SpatVector (1), groups.SpatVector (1), hypso_pal (1), hypso_pal2 (1), inner_join.SpatVector (1), is_grouped_spatvector (1), is_regular_grid (1), is_rowwise_df (1), is_rowwise_spatvector (1), left_join.SpatVector (1), make_safe_names (1), mutate.SpatRaster (1), mutate.SpatVector (1), n_groups.SpatVector (1), pretty_isoband_levels (1), pull.SpatRaster (1), pull.SpatVector (1), relocate.SpatRaster (1), relocate.SpatVector (1), remove_columns (1), rename_with.SpatRaster (1), rename_with.SpatVector (1), rename.SpatRaster (1), rename.SpatVector (1), replace_na.SpatRaster (1), replace_na.SpatVector (1), reproject_raster_on_stat (1), resample_spat (1), right_join.SpatVector (1), rowwise.SpatVector (1), scale_colour_cross_blended_b (1), scale_colour_cross_blended_c (1), scale_colour_cross_blended_d (1), scale_colour_cross_blended_tint_b (1), scale_colour_cross_blended_tint_c (1), scale_colour_cross_blended_tint_d (1), scale_colour_hypso_b (1), scale_colour_hypso_c (1), scale_colour_hypso_d (1), scale_colour_hypso_tint_b (1), slice_cols (1), slice_rows (1), whitebox.colors (1), wiki.colors (1), xyz_to_isobands (1), xyz_to_isolines (1)

dplyr

left_join (9), select (9), group_vars (7), groups (7), bind_cols (6), slice (6), count (5), inner_join (4), everything (2), filter (2), group_by (2), mutate (2), relocate (2), rename (2), rename_with (2), slice_head (2), slice_max (2), slice_min (2), slice_sample (2), slice_tail (2), tally (2), transmute (2), ungroup (2), all_of (1), anti_join (1), arrange (1), bind_rows (1), distinct (1), full_join (1), group_size (1), pull (1), right_join (1), rowwise (1), semi_join (1), summarise (1)

grDevices

palette (45), colors (23), as.raster (2), terrain.colors (1)

ggplot2

alpha (18), aes (15), after_stat (8), ggproto (6), layer (5), ggplot (2), resolution (2), GeomRaster (1)

terra

as.data.frame (11), nlyr (10), aggregate (7), vect (7), subset (4), rast (3), crs (2), ext (2), minmax (2), ncell (2), project (2), res (2), rowColFromCell (1), trim (1)

stats

df (43), dist (3), end (2), var (2)

tibble

as_tibble (30), tibble (6)

sf

st_point (5), st_sfc (5), st_as_sf (2), st_as_text (1), st_drop_geometry (1), st_geometry (1), st_is_empty (1)

scales

rescale (8), gradient_n_pal (2), colour_ramp (1)

tidyr

drop_na (4), replace_na (2), pivot_longer (1)

rlang

list2 (4), as_label (2)

cli

cli_bullets (4), style_bold (1)

graphics

layout (4), title (1)

data.table

as.data.table (3)

---

2. Statistical Properties

This package features some noteworthy statistical properties which may need to be clarified by a handling editor prior to progressing.

Details of statistical properties (click to open)

The package has:

• code in R (100% in 47 files) and
• 1 authors
• 4 vignettes
• 3 internal data files
• 11 imported packages
• 161 exported functions (median 11 lines of code)
• 292 non-exported functions in R (median 15 lines of code)

---

Statistical properties of package structure as distributional percentiles in relation to all current CRAN packages
The following terminology is used:

• loc = "Lines of Code"
• fn = "function"
• exp/not_exp = exported / not exported

All parameters are explained as tooltips in the locally-rendered HTML version of this report generated by the checks_to_markdown() function

The final measure (fn_call_network_size) is the total number of calls between functions (in R), or more abstract relationships between code objects in other languages. Values are flagged as "noteworthy" when they lie in the upper or lower 5th percentile.

measure	value	percentile	noteworthy
files_R	47	95.1
files_vignettes	7	98.5
files_tests	52	99.2
loc_R	3682	92.8
loc_vignettes	1015	90.9
loc_tests	6689	98.7	TRUE
num_vignettes	4	96.6	TRUE
data_size_total	69709	81.4
data_size_median	8120	77.8
n_fns_r	453	96.8	TRUE
n_fns_r_exported	161	97.8	TRUE
n_fns_r_not_exported	292	96.2	TRUE
n_fns_per_file_r	5	67.8
num_params_per_fn	4	54.6
loc_per_fn_r	12	36.1
loc_per_fn_r_exp	11	25.1
loc_per_fn_r_not_exp	15	49.5
rel_whitespace_R	32	96.6	TRUE
rel_whitespace_vignettes	26	90.2
rel_whitespace_tests	45	99.8	TRUE
doclines_per_fn_exp	173	97.9	TRUE
doclines_per_fn_not_exp	0	0.0	TRUE
fn_call_network_size	279	91.6

---

2a. Network visualisation

An interactive visualisation of calls between objects in the package has been uploaded as a workflow artefact. To view it, click on results from the latest 'pkgcheck' action, scroll to the bottom, and click on the 'visual-network' artefact.

---

3. goodpractice and other checks

Details of goodpractice checks (click to open)

3a. Continuous Integration Badges

GitHub Workflow Results

id	name	conclusion	sha	run_number	date
5807705136	CRAN Status Monitor	success	395c1d	77	2023-08-09
5822606949	lintr	success	4cd0c7	10	2023-08-10
5822722308	pages build and deployment	success	9c28fc	269	2023-08-10
5822621787	pkgcheck	NA	4cd0c7	3	2023-08-10
5822606966	pkgdown-gh-pages	success	4cd0c7	210	2023-08-10
5822606967	R-CMD-check	NA	4cd0c7	449	2023-08-10
5796188481	R-CMD-check-terra-devel	failure	395c1d	103	2023-08-08
5822627676	revdepcheck	NA	4cd0c7	14	2023-08-10
5822606958	test-coverage	success	4cd0c7	318	2023-08-10

---

3b. goodpractice results

R CMD check with rcmdcheck

rcmdcheck found no errors, warnings, or notes

Test coverage with covr

Package coverage: 99.32

Cyclocomplexity with cyclocomp

Error : Failed to install 'tidyterra' from local:
can't convert package data.table with RemoteType 'any' to remote

Static code analyses with lintr

lintr found the following 39 potential issues:

message	number of times
Avoid library() and require() calls in packages	31
Lines should not be more than 80 characters.	8

---

4. Other Checks

Details of other checks (click to open)

✖️ The following 2 function names are duplicated in other packages:

• • as_sf from rmapzen
• • slice_rows from purrrlyr

---

Package Versions

package	version
pkgstats	0.1.3.4
pkgcheck	0.1.2.1