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Neuropixels Project Notes #3

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weiglszonja opened this issue Jul 31, 2024 · 0 comments

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weiglszonja commented Jul 31, 2024 •

edited

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Neuropixels Project

The ecephys recording is in OpenEphys binary format and has multiple streams (NIDAQ, AP, LF)

managed to write the raw, and LFP traces with OpenEphysRecordingInterface
TODO: add NIDAQ stream

We also have a J076_12-06.json file in the example recording folder:

{
      "specification": "probeinterface",
      "version": "0.2.2dev0",
      "probes": [
        {
          "ndim": 2,
          "si_units": "um",
          "annotations": {
            "name": ""
          },
          "contact_positions": [
            [
              11.0,
              860.0
            ],
            [ ...

can read with probeinterface

probegroup = read_probeinterface('J076_12-06.json')

Screenshot 2024-07-31 at 12 14 06 (2)

ask how many probes

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