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Recombination map #4

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eva-sp opened this issue Jan 11, 2024 · 0 comments
Open

Recombination map #4

eva-sp opened this issue Jan 11, 2024 · 0 comments

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@eva-sp
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eva-sp commented Jan 11, 2024

Hello,

I've seen that the available recombination rate map files are based on hg19. I think it would be interesting to consider data in hg38, eg: deCODE map that was created on hg38.

I found 1KG data on hg38. I have attached the link in case it is useful for you.
1KG data: https://drive.google.com/drive/folders/1Tgt_7GsDO0-o02vcYSfwqHFd3JNF6R06 (from: https://github.com/popgenmethods/pyrho?tab=readme-ov-file#human-recombination-maps )

Best,
Eva

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