From 26faef1f229c82ba3d4bf264cda3dfad43de490d Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Sergio=20S=C3=A1nchez=20Ram=C3=ADrez?= <15837247+mofeing@users.noreply.github.com> Date: Fri, 22 Nov 2024 19:37:41 +0100 Subject: [PATCH] Move documentation to Vitepress (#256) * Update to DocumenterVitepress backend * Ignore Node packages * Temporarily disable raw HTML image inclusion * update alternatives * big docs update * more doc changes * update type hierarchy diagram * update * format code * configure vitepress * split API into sections * rename "alternatives" to "friends" * comment `baseTemp` * add icons for friends and api sections * fix versioned docs * try fix navigation bar * fix path to versions.js * add missing import --- .gitignore | 147 +++++++++- docs/.gitignore | 4 + docs/Project.toml | 5 + docs/make.jl | 53 ++-- docs/package.json | 15 + docs/src/.vitepress/config.mts | 71 +++++ docs/src/.vitepress/theme/VersionPicker.vue | 55 ++++ docs/src/.vitepress/theme/index.ts | 62 ++++ docs/src/.vitepress/theme/style.css | 266 ++++++++++++++++++ docs/src/alternatives.md | 8 - docs/src/api/ansatz.md | 7 + docs/src/{ => api}/quantum.md | 18 +- docs/src/api/tensor.md | 11 + docs/src/api/tensornetwork.md | 33 +++ docs/src/developer/cached-field.md | 1 + docs/src/developer/hypergraph.md | 0 docs/src/developer/keyword-dispatch.md | 0 docs/src/developer/type-hierarchy.md | 34 ++- docs/src/developer/unsafe-region.md | 9 + docs/src/friends.md | 9 + docs/src/index.md | 60 +++- docs/src/manual/ansatz/index.md | 1 + .../{ansatz/chain.md => manual/ansatz/mps.md} | 5 - docs/src/{ => manual}/ansatz/product.md | 0 docs/src/{ => manual}/contraction.md | 0 docs/src/manual/quantum.md | 5 + docs/src/manual/tensor-network.md | 25 ++ docs/src/{ => manual}/tensors.md | 26 +- docs/src/{ => manual}/transformations.md | 30 -- docs/src/tensor-network.md | 67 ----- 30 files changed, 823 insertions(+), 204 deletions(-) create mode 100644 docs/.gitignore create mode 100644 docs/package.json create mode 100644 docs/src/.vitepress/config.mts create mode 100644 docs/src/.vitepress/theme/VersionPicker.vue create mode 100644 docs/src/.vitepress/theme/index.ts create mode 100644 docs/src/.vitepress/theme/style.css delete mode 100644 docs/src/alternatives.md create mode 100644 docs/src/api/ansatz.md rename docs/src/{ => api}/quantum.md (67%) create mode 100644 docs/src/api/tensor.md create mode 100644 docs/src/api/tensornetwork.md create mode 100644 docs/src/developer/cached-field.md create mode 100644 docs/src/developer/hypergraph.md create mode 100644 docs/src/developer/keyword-dispatch.md create mode 100644 docs/src/developer/unsafe-region.md create mode 100644 docs/src/friends.md create mode 100644 docs/src/manual/ansatz/index.md rename docs/src/{ansatz/chain.md => manual/ansatz/mps.md} (97%) rename docs/src/{ => manual}/ansatz/product.md (100%) rename docs/src/{ => manual}/contraction.md (100%) create mode 100644 docs/src/manual/quantum.md create mode 100644 docs/src/manual/tensor-network.md rename docs/src/{ => manual}/tensors.md (87%) rename docs/src/{ => manual}/transformations.md (93%) delete mode 100644 docs/src/tensor-network.md diff --git a/.gitignore b/.gitignore index 0914aac99..e9fd35e65 100644 --- a/.gitignore +++ b/.gitignore @@ -120,15 +120,6 @@ $RECYCLE.BIN/ # Windows shortcuts *.lnk -# End of https://www.toptal.com/developers/gitignore/api/visualstudiocode,linux,julia,macos,windows - -# Custom rules (everything added below won't be overriden by 'Generate .gitignore File' if you use 'Update' option) -.vscode/settings.json -.julia -*.excalidraw -archive/ -test/.CondaPkg/ - # Byte-compiled / optimized / DLL files __pycache__/ *.py[cod] @@ -291,3 +282,141 @@ cython_debug/ # and can be added to the global gitignore or merged into this file. For a more nuclear # option (not recommended) you can uncomment the following to ignore the entire idea folder. #.idea/ + +# Logs +logs +*.log +npm-debug.log* +yarn-debug.log* +yarn-error.log* +lerna-debug.log* +.pnpm-debug.log* + +# Diagnostic reports (https://nodejs.org/api/report.html) +report.[0-9]*.[0-9]*.[0-9]*.[0-9]*.json + +# Runtime data +pids +*.pid +*.seed +*.pid.lock + +# Directory for instrumented libs generated by jscoverage/JSCover +lib-cov + +# Coverage directory used by tools like istanbul +coverage +*.lcov + +# nyc test coverage +.nyc_output + +# Grunt intermediate storage (https://gruntjs.com/creating-plugins#storing-task-files) +.grunt + +# Bower dependency directory (https://bower.io/) +bower_components + +# node-waf configuration +.lock-wscript + +# Compiled binary addons (https://nodejs.org/api/addons.html) +build/Release + +# Dependency directories +node_modules/ +jspm_packages/ + +# Snowpack dependency directory (https://snowpack.dev/) +web_modules/ + +# TypeScript cache +*.tsbuildinfo + +# Optional npm cache directory +.npm + +# Optional eslint cache +.eslintcache + +# Optional stylelint cache +.stylelintcache + +# Microbundle cache +.rpt2_cache/ +.rts2_cache_cjs/ +.rts2_cache_es/ +.rts2_cache_umd/ + +# Optional REPL history +.node_repl_history + +# Output of 'npm pack' +*.tgz + +# Yarn Integrity file +.yarn-integrity + +# dotenv environment variable files +.env +.env.development.local +.env.test.local +.env.production.local +.env.local + +# parcel-bundler cache (https://parceljs.org/) +.cache +.parcel-cache + +# Next.js build output +.next +out + +# Nuxt.js build / generate output +.nuxt +dist + +# Gatsby files +.cache/ +# Comment in the public line in if your project uses Gatsby and not Next.js +# https://nextjs.org/blog/next-9-1#public-directory-support +# public + +# vuepress build output +.vuepress/dist + +# vuepress v2.x temp and cache directory +.temp +.cache + +# Docusaurus cache and generated files +.docusaurus + +# Serverless directories +.serverless/ + +# FuseBox cache +.fusebox/ + +# DynamoDB Local files +.dynamodb/ + +# TernJS port file +.tern-port + +# Stores VSCode versions used for testing VSCode extensions +.vscode-test + +# yarn v2 +.yarn/cache +.yarn/unplugged +.yarn/build-state.yml +.yarn/install-state.gz +.pnp.* + +# Custom rules (everything added below won't be overriden by 'Generate .gitignore File' if you use 'Update' option) +.vscode/settings.json +.julia +*.excalidraw +archive/ +test/.CondaPkg/ diff --git a/docs/.gitignore b/docs/.gitignore new file mode 100644 index 000000000..0587d7400 --- /dev/null +++ b/docs/.gitignore @@ -0,0 +1,4 @@ +build/ +node_modules/ +package-lock.json +Manifest.toml \ No newline at end of file diff --git a/docs/Project.toml b/docs/Project.toml index 6ac2a8e16..b2c25ef34 100644 --- a/docs/Project.toml +++ b/docs/Project.toml @@ -2,12 +2,17 @@ CairoMakie = "13f3f980-e62b-5c42-98c6-ff1f3baf88f0" Documenter = "e30172f5-a6a5-5a46-863b-614d45cd2de4" DocumenterCitations = "daee34ce-89f3-4625-b898-19384cb65244" +DocumenterVitepress = "4710194d-e776-4893-9690-8d956a29c365" EinExprs = "b1794770-133b-4de1-afb4-526377e9f4c5" GraphMakie = "1ecd5474-83a3-4783-bb4f-06765db800d2" +Kroki = "b3565e16-c1f2-4fe9-b4ab-221c88942068" Makie = "ee78f7c6-11fb-53f2-987a-cfe4a2b5a57a" NetworkLayout = "46757867-2c16-5918-afeb-47bfcb05e46a" Tenet = "85d41934-b9cd-44e1-8730-56d86f15f3ec" +[sources] +Tenet = {path = "/Users/mofeing/Developer/Tenet.jl/docs/.."} + [compat] Documenter = "1" DocumenterCitations = "1.2" diff --git a/docs/make.jl b/docs/make.jl index 681c099e7..0474b13f7 100644 --- a/docs/make.jl +++ b/docs/make.jl @@ -1,9 +1,5 @@ -using Pkg -Pkg.activate(@__DIR__) -Pkg.develop(; path=joinpath(@__DIR__, "..")) -Pkg.instantiate() - using Documenter +using DocumenterVitepress using DocumenterCitations using Tenet using CairoMakie @@ -18,28 +14,45 @@ makedocs(; modules=[Tenet, Base.get_extension(Tenet, :TenetGraphMakieExt)], sitename="Tenet.jl", authors="Sergio Sánchez Ramírez and contributors", - pages=Any[ + pages=[ "Home" => "index.md", - "Tensors" => "tensors.md", - "Tensor Networks" => "tensor-network.md", - "Contraction" => "contraction.md", - "Transformations" => "transformations.md", - "Quantum" => [ - "Introduction" => "quantum.md", - "Ansatzes" => ["`Product` ansatz" => "ansatz/product.md", "`Chain` ansatz" => "ansatz/chain.md"], + "📖 Manual" => [ + "Tensors" => "manual/tensors.md", + "Tensor Networks" => "manual/tensor-network.md", + "Contraction" => "manual/contraction.md", + "Transformations" => "manual/transformations.md", + "Quantum" => "manual/quantum.md", + "Ansatz" => [ + "Introduction" => "manual/ansatz/index.md", + "Product ansatz" => "manual/ansatz/product.md", + "MPS/MPO ansatz" => "manual/ansatz/mps.md", + ], + "Visualization" => "visualization.md", + ], + "🫂 Friends" => "friends.md", + "🧭 API" => [ + "Tensor" => "api/tensor.md", + "TensorNetwork" => "api/tensornetwork.md", + "Quantum" => "api/quantum.md", + "Ansatz" => "api/ansatz.md", + ], + "⚒️ Developer Reference" => [ + "Hypergraph representation of `TensorNetwork`" => "developer/hypergraph.md", + "Type Hierarchy" => "developer/type-hierarchy.md", + "Unsafe region" => "developer/unsafe-region.md", + "Cached field" => "developer/cached-field.md", + "Keyword Dispatch" => "developer/keyword-dispatch.md", ], - "Visualization" => "visualization.md", - "Alternatives" => "alternatives.md", - "References" => "references.md", - "⚒️ Developer Reference" => ["`TensorNetwork` type hierarchy" => "developer/type-hierarchy.md"], ], pagesonly=true, - format=Documenter.HTML(; - prettyurls=false, assets=["assets/favicon.ico", "assets/citations.css", "assets/youtube.css"] + format=DocumenterVitepress.MarkdownVitepress(; + repo="https://github.com/bsc-quantic/Tenet.jl", + assets=["assets/favicon.ico", "assets/citations.css", "assets/youtube.css"], + # build_vitepress=false, ), plugins=[bib], checkdocs=:exports, warnonly=true, ) -deploydocs(; repo="github.com/bsc-quantic/Tenet.jl.git", devbranch="master", push_preview=true) +deploydocs(; repo="github.com/bsc-quantic/Tenet.jl.git", target="build", devbranch="master", push_preview=true) diff --git a/docs/package.json b/docs/package.json new file mode 100644 index 000000000..5633b4976 --- /dev/null +++ b/docs/package.json @@ -0,0 +1,15 @@ +{ + "scripts": { + "docs:dev": "vitepress dev build/.documenter", + "docs:build": "vitepress build build/.documenter", + "docs:preview": "vitepress preview build/.documenter" + }, + "dependencies": { + "@shikijs/transformers": "^1.1.7", + "markdown-it": "^14.1.0", + "markdown-it-footnote": "^4.0.0", + "markdown-it-mathjax3": "^4.3.2", + "vitepress": "^1.1.4", + "vitepress-plugin-tabs": "^0.5.0" + } +} diff --git a/docs/src/.vitepress/config.mts b/docs/src/.vitepress/config.mts new file mode 100644 index 000000000..bdb14a1c3 --- /dev/null +++ b/docs/src/.vitepress/config.mts @@ -0,0 +1,71 @@ +import { defineConfig } from 'vitepress' +import { tabsMarkdownPlugin } from 'vitepress-plugin-tabs' +import mathjax3 from "markdown-it-mathjax3"; +import footnote from "markdown-it-footnote"; + +const baseTemp = { + base: 'REPLACE_ME_DOCUMENTER_VITEPRESS',// TODO: replace this in makedocs! +} + +const navTemp = { + nav: 'REPLACE_ME_DOCUMENTER_VITEPRESS', +} + +const nav = [ + ...navTemp.nav, + { + component: 'VersionPicker' + } +] + +// https://vitepress.dev/reference/site-config +export default defineConfig({ + base: baseTemp.base, + title: 'REPLACE_ME_DOCUMENTER_VITEPRESS', + description: 'Documentation of Tenet.jl library', + lastUpdated: true, + cleanUrls: true, + outDir: 'REPLACE_ME_DOCUMENTER_VITEPRESS', // This is required for MarkdownVitepress to work correctly... + head: [ + ['link', { rel: 'icon', href: 'REPLACE_ME_DOCUMENTER_VITEPRESS_FAVICON' }], + ["script", { src: `/Tenet.jl/versions.js` }], + ["script", { src: `${baseTemp.base}siteinfo.js` }], + ], + ignoreDeadLinks: true, + + markdown: { + math: true, + config(md) { + md.use(tabsMarkdownPlugin), + md.use(mathjax3), + md.use(footnote) + }, + theme: { + light: "github-light", + dark: "github-dark" + } + }, + themeConfig: { + outline: 'deep', + logo: { + light: '/logo.svg', + dark: '/logo-dark.svg', + }, + search: { + provider: 'local', + options: { + detailedView: true + } + }, + nav, + sidebar: 'REPLACE_ME_DOCUMENTER_VITEPRESS', + editLink: 'REPLACE_ME_DOCUMENTER_VITEPRESS', + socialLinks: [ + { icon: 'github', link: 'REPLACE_ME_DOCUMENTER_VITEPRESS' } + ], + footer: { + message: 'Made with DocumenterVitepress.jl
', + copyright: `© Copyright ${new Date().getUTCFullYear()} Barcelona Supercomputing Center - Centro Nacional de Supercomputación` + } + } +}) diff --git a/docs/src/.vitepress/theme/VersionPicker.vue b/docs/src/.vitepress/theme/VersionPicker.vue new file mode 100644 index 000000000..b33b7a5cc --- /dev/null +++ b/docs/src/.vitepress/theme/VersionPicker.vue @@ -0,0 +1,55 @@ + + + + + + + \ No newline at end of file diff --git a/docs/src/.vitepress/theme/index.ts b/docs/src/.vitepress/theme/index.ts new file mode 100644 index 000000000..d7b0b0a2f --- /dev/null +++ b/docs/src/.vitepress/theme/index.ts @@ -0,0 +1,62 @@ +// .vitepress/theme/index.ts +import { h, watch } from 'vue' +import type { Theme } from 'vitepress' +import DefaultTheme from 'vitepress/theme' +import VersionPicker from "./VersionPicker.vue" + +import { enhanceAppWithTabs } from 'vitepress-plugin-tabs/client' +import './style.css' + +export default { + extends: DefaultTheme, + Layout() { + return h(DefaultTheme.Layout, null, { + // https://vitepress.dev/guide/extending-default-theme#layout-slots + }) + }, + enhanceApp({ app, router, siteData }) { + enhanceAppWithTabs(app) + app.component('VersionPicker', VersionPicker); + // Only run this on the client. Not during build. + // this function replaces the version in the URL with the stable prefix whenever a + // new route is navigated to. VitePress does not support relative links all over the site, + // so urls will go to v0.XY even if we start at stable. This solution is not ideal as + // there is a noticeable delay between navigating to a new page and editing the url, but it's + // currently better than nothing, as users are bound to copy versioned links to the docs otherwise + // which will lead users to outdated docs in the future. + if (typeof window !== "undefined") { + function rewriteURL() { + // DOCUMENTER_NEWEST is defined in versions.js, DOCUMENTER_CURRENT_VERSION and DOCUMENTER_STABLE + // in siteinfo.js. + if ( + window.DOCUMENTER_NEWEST === undefined || + window.DOCUMENTER_CURRENT_VERSION === undefined || + window.DOCUMENTER_STABLE === undefined + ) { + return; + } + + // Current version is newest version, so we can rewrite the url + if (window.DOCUMENTER_NEWEST === window.DOCUMENTER_CURRENT_VERSION) { + const rewritten_url = window.location.href.replace( + window.DOCUMENTER_CURRENT_VERSION, + window.DOCUMENTER_STABLE + ); + window.history.replaceState( + { additionalInformation: "URL rewritten to stable" }, + "Makie", + rewritten_url + ); + return; + } + } + + // rewrite on router changes through vitepress + watch(() => router.route.data.relativePath, rewriteURL, { + immediate: true, + }); + // also rewrite at initial load + document.addEventListener("DOMContentLoaded", rewriteURL); + } + } +} satisfies Theme \ No newline at end of file diff --git a/docs/src/.vitepress/theme/style.css b/docs/src/.vitepress/theme/style.css new file mode 100644 index 000000000..fedc81ed5 --- /dev/null +++ b/docs/src/.vitepress/theme/style.css @@ -0,0 +1,266 @@ +/* Customize default theme styling by overriding CSS variables: +https://github.com/vuejs/vitepress/blob/main/src/client/theme-default/styles/vars.css + */ + +/* Layouts */ + +/* + :root { + --vp-layout-max-width: 1440px; +} */ + +.VPHero .clip { + white-space: pre; + max-width: 500px; +} + +/* Fonts */ + +@font-face { + font-family: JuliaMono-Regular; + src: url("https://cdn.jsdelivr.net/gh/cormullion/juliamono/webfonts/JuliaMono-Regular.woff2"); +} + +:root { + /* Typography */ + --vp-font-family-base: "Barlow", "Inter var experimental", "Inter var", + -apple-system, BlinkMacSystemFont, "Segoe UI", Roboto, Oxygen, Ubuntu, + Cantarell, "Fira Sans", "Droid Sans", "Helvetica Neue", sans-serif; + + /* Code Snippet font */ + --vp-font-family-mono: JuliaMono-Regular, monospace; + +} + +/* +Disable contextual alternates (kind of like ligatures but different) in monospace, +which turns `/>` to an up arrow and `|>` (the Julia pipe symbol) to an up arrow as well. +This is pretty bad for Julia folks reading even though copy+paste retains the same text. +*/ +/* Target elements with class 'mono' */ +.mono-no-substitutions { + font-family: "JuliaMono-Light", monospace; + font-feature-settings: "calt" off; +} + +/* Alternatively, you can use the following if you prefer: */ +.mono-no-substitutions-alt { + font-family: "JuliaMono-Light", monospace; + font-variant-ligatures: none; +} + +/* If you want to apply this globally to all monospace text: */ +pre, +code { + font-family: "JuliaMono-Light", monospace; + font-feature-settings: "calt" off; +} + +/* Colors */ + +:root { + --julia-blue: #4063D8; + --julia-purple: #9558B2; + --julia-red: #CB3C33; + --julia-green: #389826; + + --vp-c-brand: #389826; + --vp-c-brand-light: #3dd027; + --vp-c-brand-lighter: #9499ff; + --vp-c-brand-lightest: #bcc0ff; + --vp-c-brand-dark: #535bf2; + --vp-c-brand-darker: #454ce1; + --vp-c-brand-dimm: #212425; +} + +/* Component: Button */ + +:root { + --vp-button-brand-border: var(--vp-c-brand-light); + --vp-button-brand-text: var(--vp-c-white); + --vp-button-brand-bg: var(--vp-c-brand); + --vp-button-brand-hover-border: var(--vp-c-brand-light); + --vp-button-brand-hover-text: var(--vp-c-white); + --vp-button-brand-hover-bg: var(--vp-c-brand-light); + --vp-button-brand-active-border: var(--vp-c-brand-light); + --vp-button-brand-active-text: var(--vp-c-white); + --vp-button-brand-active-bg: var(--vp-button-brand-bg); +} + +/* Component: Home */ + +:root { + --vp-home-hero-name-color: transparent; + --vp-home-hero-name-background: -webkit-linear-gradient(120deg, + #9558B2 30%, + #CB3C33); + + --vp-home-hero-image-background-image: linear-gradient(-45deg, + #9558B2 30%, + #389826 30%, + #CB3C33); + --vp-home-hero-image-filter: blur(40px); +} + +@media (min-width: 640px) { + :root { + --vp-home-hero-image-filter: blur(56px); + } +} + +@media (min-width: 960px) { + :root { + --vp-home-hero-image-filter: blur(72px); + } +} + +/* Component: Custom Block */ + +:root.dark { + --vp-custom-block-tip-border: var(--vp-c-brand); + --vp-custom-block-tip-text: var(--vp-c-brand-lightest); + --vp-custom-block-tip-bg: var(--vp-c-brand-dimm); + + /* // Tweak the color palette for blacks and dark grays */ + --vp-c-black: hsl(220 20% 9%); + --vp-c-black-pure: hsl(220, 24%, 4%); + --vp-c-black-soft: hsl(220 16% 13%); + --vp-c-black-mute: hsl(220 14% 17%); + --vp-c-gray: hsl(220 8% 56%); + --vp-c-gray-dark-1: hsl(220 10% 39%); + --vp-c-gray-dark-2: hsl(220 12% 28%); + --vp-c-gray-dark-3: hsl(220 12% 23%); + --vp-c-gray-dark-4: hsl(220 14% 17%); + --vp-c-gray-dark-5: hsl(220 16% 13%); + + /* // Backgrounds */ + /* --vp-c-bg: hsl(240, 2%, 11%); */ + --vp-custom-block-info-bg: hsl(220 14% 17%); + /* --vp-c-gutter: hsl(220 20% 9%); + + --vp-c-bg-alt: hsl(220 20% 9%); + --vp-c-bg-soft: hsl(220 14% 17%); + --vp-c-bg-mute: hsl(220 12% 23%); + */ +} + +/* Component: Algolia */ + +.DocSearch { + --docsearch-primary-color: var(--vp-c-brand) !important; +} + +/* Component: MathJax */ + +mjx-container>svg { + display: block; + margin: auto; +} + +mjx-container { + padding: 0.5rem 0; +} + +mjx-container { + display: inline; + margin: auto 2px -2px; +} + +mjx-container>svg { + margin: auto; + display: inline-block; +} + +/** + * Colors links + * -------------------------------------------------------------------------- */ + +:root { + --vp-c-brand-1: #CB3C33; + --vp-c-brand-2: #CB3C33; + --vp-c-brand-3: #CB3C33; + --vp-c-sponsor: #ca2971; + --vitest-c-sponsor-hover: #c13071; +} + +.dark { + --vp-c-brand-1: #91dd33; + --vp-c-brand-2: #91dd33; + --vp-c-brand-3: #91dd33; + --vp-c-sponsor: #91dd33; + --vitest-c-sponsor-hover: #e51370; +} + +/** + * Change images from light to dark theme + * -------------------------------------------------------------------------- */ + +:root:not(.dark) .dark-only { + display: none; +} + +:root:is(.dark) .light-only { + display: none; +} + +/* https://bddxg.top/article/note/vitepress优化/一些细节上的优化.html#文档页面调整-加宽 */ + +.VPDoc.has-aside .content-container { + max-width: 100% !important; +} + +.aside { + max-width: 200px !important; + padding-left: 0 !important; +} + +.VPDoc { + padding-top: 15px !important; + padding-left: 5px !important; + +} + +/* This one does the right menu */ + +.VPDocOutlineItem li { + text-overflow: ellipsis; + overflow: hidden; + white-space: nowrap; + max-width: 200px; +} + +.VPNavBar .title { + text-overflow: ellipsis; + overflow: hidden; + white-space: nowrap; +} + +@media (max-width: 960px) { + .VPDoc { + padding-left: 25px !important; + } +} + +/* This one does the left menu */ + +/* .VPSidebarItem .VPLink p { + text-overflow: ellipsis; + overflow: hidden; + white-space: nowrap; + max-width: 200px; +} */ + + +/* Component: Docstring Custom Block */ + +.jldocstring.custom-block { + border: 1px solid var(--vp-c-gray-2); + color: var(--vp-c-text-1) +} + +.jldocstring.custom-block summary { + font-weight: 700; + cursor: pointer; + user-select: none; + margin: 0 0 8px; +} \ No newline at end of file diff --git a/docs/src/alternatives.md b/docs/src/alternatives.md deleted file mode 100644 index 54f5cb858..000000000 --- a/docs/src/alternatives.md +++ /dev/null @@ -1,8 +0,0 @@ -# Alternatives - -`Tenet` is strongly opinionated. We acknowledge that it may not suit all cases (although we try 🙂). If your case doesn't fit `Tenet`'s design, you can try the following libraries: - -- [quimb](https://github.com/jcmgray/quimb) [gray2018quimb](@cite) Flexible Tensor Network written in Python. Main source of inspiration for `Tenet`. -- [tenpy](https://github.com/tenpy/tenpy) [hauschild2021tensor](@cite) Tensor Network library written in Python with a strong focus on physics. -- [ITensors.jl](https://github.com/ITensor/ITensors.jl) [itensor](@cite) Mature Tensor Network framework written in Julia. -- [tensorkrowch](https://github.com/joserapa98/tensorkrowch) [ramon2023tensorkrowch](@cite) A new Tensor Network library built on top of PyTorch. diff --git a/docs/src/api/ansatz.md b/docs/src/api/ansatz.md new file mode 100644 index 000000000..c0af2f953 --- /dev/null +++ b/docs/src/api/ansatz.md @@ -0,0 +1,7 @@ +# Ansatz + +## MPS + +```@docs +MPS +``` diff --git a/docs/src/quantum.md b/docs/src/api/quantum.md similarity index 67% rename from docs/src/quantum.md rename to docs/src/api/quantum.md index 0c8dd0302..ce3e5986d 100644 --- a/docs/src/quantum.md +++ b/docs/src/api/quantum.md @@ -1,4 +1,4 @@ -# `Quantum` Tensor Networks +# Quantum ```@docs Quantum @@ -6,34 +6,18 @@ Tenet.TensorNetwork(::Quantum) Base.adjoint(::Quantum) sites nsites -``` - -## Queries - -```@docs Tenet.inds(::Quantum; kwargs...) Tenet.tensors(::Quantum; kwargs...) -``` - -## Connecting `Quantum` Tensor Networks - -```@docs inputs outputs lanes ninputs noutputs nlanes -``` - -```@docs Socket socket(::Quantum) Scalar State Operator -``` - -```@docs Base.merge(::Quantum, ::Quantum...) ``` diff --git a/docs/src/api/tensor.md b/docs/src/api/tensor.md new file mode 100644 index 000000000..50cc9dab1 --- /dev/null +++ b/docs/src/api/tensor.md @@ -0,0 +1,11 @@ +# Tensor + +```@docs +Base.parent(::Tensor) +inds(::Tensor) +Base.size(::Tensor) +Tenet.contract(::Tensor, ::Tensor) +LinearAlgebra.svd(::Tensor) +LinearAlgebra.qr(::Tensor) +LinearAlgebra.lu(::Tensor) +``` diff --git a/docs/src/api/tensornetwork.md b/docs/src/api/tensornetwork.md new file mode 100644 index 000000000..c2da8f50a --- /dev/null +++ b/docs/src/api/tensornetwork.md @@ -0,0 +1,33 @@ +# TensorNetwork + +```@docs +TensorNetwork +inds(::Tenet.TensorNetwork) +size(::Tenet.TensorNetwork) +tensors(::Tenet.TensorNetwork) +push!(::Tenet.TensorNetwork, ::Tensor) +pop!(::Tenet.TensorNetwork, ::Tensor) +append!(::Tenet.TensorNetwork, ::Base.AbstractVecOrTuple{<:Tensor}) +merge!(::Tenet.TensorNetwork, ::Tenet.TensorNetwork) +delete!(::Tenet.TensorNetwork, ::Any) +replace! +selectdim +slice! +view(::Tenet.TensorNetwork) +Base.copy(::Tenet.TensorNetwork) +Base.rand(::Type{TensorNetwork}, n::Integer, regularity::Integer) +``` + +## Transformations + +```@docs +transform +transform! +Tenet.HyperFlatten +Tenet.HyperGroup +Tenet.ContractSimplification +Tenet.DiagonalReduction +Tenet.AntiDiagonalGauging +Tenet.Truncate +Tenet.SplitSimplificationd +``` diff --git a/docs/src/developer/cached-field.md b/docs/src/developer/cached-field.md new file mode 100644 index 000000000..7d2c5237c --- /dev/null +++ b/docs/src/developer/cached-field.md @@ -0,0 +1 @@ +# Cached field diff --git a/docs/src/developer/hypergraph.md b/docs/src/developer/hypergraph.md new file mode 100644 index 000000000..e69de29bb diff --git a/docs/src/developer/keyword-dispatch.md b/docs/src/developer/keyword-dispatch.md new file mode 100644 index 000000000..e69de29bb diff --git a/docs/src/developer/type-hierarchy.md b/docs/src/developer/type-hierarchy.md index 9c3584729..4839859f7 100644 --- a/docs/src/developer/type-hierarchy.md +++ b/docs/src/developer/type-hierarchy.md @@ -1,5 +1,9 @@ # Inheritance and Traits +```@setup kroki +using Kroki +``` + Julia (and in general, all modern languages like Rust or Go) implement Object Oriented Programming (OOP) in a rather restricted form compared to popular OOP languages like Java, C++ or Python. In particular, they forbid _structural inheritance_; i.e. inheriting fields from parent superclass(es). @@ -9,16 +13,28 @@ Julia design space on this topic is not completely clear. Julia has _abstract ty As of the time of writing, the type hierarchy of Tenet looks like this: -```mermaid -graph TD - id1(AbstractTensorNetwork) --> TensorNetwork - id1(AbstractTensorNetwork) --> id2(AbstractQuantum) - id2(AbstractQuantum) --> Quantum - id2(AbstractQuantum) --> id3(Ansatz) - id3(Ansatz) --> Product - id3(Ansatz) --> Dense - id3(Ansatz) --> Chain +```@example kroki +mermaid"""graph TD + id1(AbstractTensorNetwork) + id2(AbstractQuantum) + id3(AbstractAnsatz) + id4(AbstractMPO) + id5(AbstractMPS) + id1 -->|inherits| id2 -->|inherits| id3 -->|inherits| id4 -->|inherits| id5 + id1 -->|inherits| TensorNetwork + id2 -->|inherits| Quantum + id3 -->|inherits| Ansatz + id3 -->|inherits| Product + id4 -->|inherits| MPO + id5 -->|inherits| MPS + Ansatz -.->|contains| Quantum -.->|contains| TensorNetwork + Product -.->|contains| Ansatz + MPO -.->|contains| Ansatz + MPS -.->|contains| Ansatz style id1 stroke-dasharray: 5 5 style id2 stroke-dasharray: 5 5 style id3 stroke-dasharray: 5 5 + style id4 stroke-dasharray: 5 5 + style id5 stroke-dasharray: 5 5 +""" ``` diff --git a/docs/src/developer/unsafe-region.md b/docs/src/developer/unsafe-region.md new file mode 100644 index 000000000..a3ce36ce1 --- /dev/null +++ b/docs/src/developer/unsafe-region.md @@ -0,0 +1,9 @@ +# Unsafe regions + +There are cases in which you may want to temporarily avoid index size checks on `push!` to a [`TensorNetwork`](@ref). + +```julia +@unsafe_region tn begin + ... +end +``` diff --git a/docs/src/friends.md b/docs/src/friends.md new file mode 100644 index 000000000..c1249f916 --- /dev/null +++ b/docs/src/friends.md @@ -0,0 +1,9 @@ +# Friends + +If `Tenet`'s design doesn't fit your case, ¡no problem!. There are other nice libraries in the wild, of which we recommend to take a look at: + +- [quimb](https://github.com/jcmgray/quimb) Flexible Tensor Network written in Python. Main source of inspiration for `Tenet`. +- [tenpy](https://github.com/tenpy/tenpy) Tensor Network library written in Python with a strong focus on physics. +- [ITensors.jl](https://github.com/ITensor/ITensors.jl) and [ITensorNetworks.jl](https://github.com/ITensors/ITensorNetworks.jl) Mature Tensor Network framework written in Julia. +- [tensorkrowch](https://github.com/joserapa98/tensorkrowch) A new Tensor Network library built on top of PyTorch. +- [SeeMPS](https://github.com/juanjosegarciaripoll/seemps) diff --git a/docs/src/index.md b/docs/src/index.md index 3d7960ed7..6ef4473a6 100644 --- a/docs/src/index.md +++ b/docs/src/index.md @@ -1,4 +1,48 @@ -# Tenet.jl +```@raw html +--- +# https://vitepress.dev/reference/default-theme-home-page +layout: home + +hero: + name: Tenet.jl + text: Hackable Tensor Networks + tagline: + actions: + - theme: brand + text: Manual + link: /manual + - theme: alt + text: API Reference 📚 + link: /api/api + - theme: alt + text: View on GitHub + link: https://github.com/bsc-quantic/Tenet.jl + image: + src: /logo.svg + alt: Tenet.jl + +features: + - icon: 🚀 + title: Fast & Device Agnostic + details: Its deep integration with Reactant.jl and carefully developed code, makes it go brrrr + link: /introduction + + - icon: ∂ + title: Built-In MLIR AD + details: Leverage Enzyme-Powered Automatic Differentiation to Differentiate MLIR Functions + link: /introduction + + - icon: 🧩 + title: Carefully crafted + details: + link: /introduction + + - icon: 🫂 + title: Compatible with friends + details: + link: /alternatives +--- +``` !!! info "BSC-Quantic's Registry" `Tenet` and some of its dependencies are located in our [own Julia registry](https://github.com/bsc-quantic/Registry). @@ -9,20 +53,6 @@ pkg"registry add https://github.com/bsc-quantic/Registry" ``` -A Julia library for **_Ten_**sor **_Net_**works. `Tenet` can be executed both at local environments and on large supercomputers. Its goals are, - -- **Expressiveness** _Simple to use_ 👶 -- **Flexibility** _Extend it to your needs_ 🔧 -- **Performance** _Goes brr... fast_ 🏎️ - -A video of its presentation at JuliaCon 2023 can be seen here: - -```@raw html -
- -
-``` - ## Features - Optimized Tensor Network contraction, powered by [`EinExprs`](https://github.com/bsc-quantic/EinExprs.jl) diff --git a/docs/src/manual/ansatz/index.md b/docs/src/manual/ansatz/index.md new file mode 100644 index 000000000..d36fb337e --- /dev/null +++ b/docs/src/manual/ansatz/index.md @@ -0,0 +1 @@ +# Ansatz diff --git a/docs/src/ansatz/chain.md b/docs/src/manual/ansatz/mps.md similarity index 97% rename from docs/src/ansatz/chain.md rename to docs/src/manual/ansatz/mps.md index 37d32cfd4..91190139e 100644 --- a/docs/src/ansatz/chain.md +++ b/docs/src/manual/ansatz/mps.md @@ -51,8 +51,3 @@ fig # hide ``` In `Tenet`, the generic `MatrixProduct` ansatz implements this topology. Type variables are used to address their functionality (`State` or `Operator`) and their boundary conditions (`Open` or `Periodic`). - -```@docs -MatrixProduct -MatrixProduct(::Any) -``` diff --git a/docs/src/ansatz/product.md b/docs/src/manual/ansatz/product.md similarity index 100% rename from docs/src/ansatz/product.md rename to docs/src/manual/ansatz/product.md diff --git a/docs/src/contraction.md b/docs/src/manual/contraction.md similarity index 100% rename from docs/src/contraction.md rename to docs/src/manual/contraction.md diff --git a/docs/src/manual/quantum.md b/docs/src/manual/quantum.md new file mode 100644 index 000000000..4ecd0f012 --- /dev/null +++ b/docs/src/manual/quantum.md @@ -0,0 +1,5 @@ +# `Quantum` Tensor Networks + +## Queries + +## Connecting `Quantum` Tensor Networks diff --git a/docs/src/manual/tensor-network.md b/docs/src/manual/tensor-network.md new file mode 100644 index 000000000..11c57855b --- /dev/null +++ b/docs/src/manual/tensor-network.md @@ -0,0 +1,25 @@ +# Tensor Networks + +Tensor Networks (TN) are a graphical notation for representing complex multi-linear functions. For example, the following equation + +```math +\sum_{ijklmnop} A_{im} B_{ijp} C_{njk} D_{pkl} E_{mno} F_{ol} +``` + +can be represented visually as + +The graph's nodes represent tensors and edges represent tensor indices. + +In `Tenet`, these objects are represented by the [`TensorNetwork`](@ref) type. + +Information about a `TensorNetwork` can be queried with the following functions. + +## Query information + +## Modification + +### Add/Remove tensors + +### Replace existing elements + +## Slicing diff --git a/docs/src/tensors.md b/docs/src/manual/tensors.md similarity index 87% rename from docs/src/tensors.md rename to docs/src/manual/tensors.md index 7d6b725dc..023522b9e 100644 --- a/docs/src/tensors.md +++ b/docs/src/manual/tensors.md @@ -4,6 +4,8 @@ using Tenet ``` +If you have reached here, you probably know wha a tensor is. Nevertheless, we are gonna give a brief remainder. + There are many jokes[^1] about how to define a _tensor_. The definition we are giving here might not be the most correct one, but it is good enough for our use case (don't kill me please, mathematicians). A tensor $T$ of order[^2] $n$ is a multilinear[^3] application between $n$ vector spaces over a field $\mathcal{F}$. @@ -23,10 +25,6 @@ T(\mathbf{v}^{(1)}, \dots, \mathbf{v}^{(n)}) = c \in \mathcal{F} \qquad\qquad \f Tensor algebra is a higher-order generalization of linear algebra, where scalar numbers can be viewed as _order-0 tensors_, vectors as _order-1 tensors_, matrices as _order-2 tensors_, ... -```@raw html - -``` - Letters are used to identify each of the vector spaces the tensor relates to. In computer science, you would intuitively think of tensors as "_n-dimensional arrays with named dimensions_". @@ -46,28 +44,8 @@ Tᵢⱼₖ = Tensor(rand(3,5,2), (:i,:j,:k)) The _dimensionality_ or size of each index can be consulted using the `size` function. -```@docs -Base.size(::Tensor) -``` - ```@repl tensor size(Tᵢⱼₖ) size(Tᵢⱼₖ, :j) length(Tᵢⱼₖ) ``` - -## Operations - -### Contraction - -```@docs -Tenet.contract(::Tensor, ::Tensor) -``` - -### Factorizations - -```@docs -LinearAlgebra.svd(::Tensor) -LinearAlgebra.qr(::Tensor) -LinearAlgebra.lu(::Tensor) -``` diff --git a/docs/src/transformations.md b/docs/src/manual/transformations.md similarity index 93% rename from docs/src/transformations.md rename to docs/src/manual/transformations.md index a2b6e7e58..5a2c97885 100644 --- a/docs/src/transformations.md +++ b/docs/src/manual/transformations.md @@ -17,26 +17,12 @@ Our approach is based in [gray2021hyper](@cite), which can also be found in [qui In Tenet, we provide a set of predefined transformations which you can apply to your `TensorNetwork` using both the `transform`/`transform!` functions. -```@docs -transform -transform! -``` - ## Available transformations ### Hyperindex converter -```@docs -Tenet.HyperFlatten -Tenet.HyperGroup -``` - ### Contraction simplification -```@docs -Tenet.ContractSimplification -``` - ```@example plot set_theme!(resolution=(800,200)) # hide fig = Figure() #hide @@ -60,10 +46,6 @@ fig #hide ### Diagonal reduction -```@docs -Tenet.DiagonalReduction -``` - ```@example plot set_theme!(resolution=(800,200)) # hide fig = Figure() #hide @@ -95,16 +77,8 @@ fig #hide ### Anti-diagonal reduction -```@docs -Tenet.AntiDiagonalGauging -``` - ### Dimension truncation -```@docs -Tenet.Truncate -``` - ```@example plot set_theme!(resolution=(800,200)) # hide fig = Figure() #hide @@ -130,10 +104,6 @@ fig #hide ### Split simplification -```@docs -Tenet.SplitSimplification -``` - ```@example plot set_theme!(resolution=(800,200)) # hide fig = Figure() #hide diff --git a/docs/src/tensor-network.md b/docs/src/tensor-network.md deleted file mode 100644 index b5b48ebe8..000000000 --- a/docs/src/tensor-network.md +++ /dev/null @@ -1,67 +0,0 @@ -# Tensor Networks - -Tensor Networks (TN) are a graphical notation for representing complex multi-linear functions. For example, the following equation - -```math -\sum_{ijklmnop} A_{im} B_{ijp} C_{njk} D_{pkl} E_{mno} F_{ol} -``` - -can be represented visually as - -```@raw html -
-Sketch of a Tensor Network -
Sketch of a Tensor Network
-
-``` - -The graph's nodes represent tensors and edges represent tensor indices. - -In `Tenet`, these objects are represented by the [`TensorNetwork`](@ref) type. - -```@docs -TensorNetwork -``` - -Information about a `TensorNetwork` can be queried with the following functions. - -## Query information - -```@docs -inds(::Tenet.TensorNetwork) -size(::Tenet.TensorNetwork) -tensors(::Tenet.TensorNetwork) -``` - -## Modification - -### Add/Remove tensors - -```@docs -push!(::Tenet.TensorNetwork, ::Tensor) -append!(::Tenet.TensorNetwork, ::Base.AbstractVecOrTuple{<:Tensor}) -merge!(::Tenet.TensorNetwork, ::Tenet.TensorNetwork) -pop!(::Tenet.TensorNetwork, ::Tensor) -delete!(::Tenet.TensorNetwork, ::Any) -``` - -### Replace existing elements - -```@docs -replace! -``` - -## Slicing - -```@docs -selectdim -slice! -view(::Tenet.TensorNetwork) -``` - -## Miscelaneous - -```@docs -Base.copy(::Tenet.TensorNetwork) -Base.rand(::Type{TensorNetwork}, n::Integer, regularity::Integer) -```