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CONTRIBUTING.md

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Contributing

Setting up a development environment

  • Install development dependencies.
python3 -m pip install -r requirements-dev.txt
python3 -m pre_commit install

Running Pylint

Use Pylint to check for some types of errors.

./lint

To disable warnings, use:

./lint --disable=W

Running Black

Use Black to format code.

black gnomad_qc

Running autopep8

Use autopep8 to format comments.

autopep8 --in-place gnomad_qc

Running isort

Use isort to format imports.

isort gnomad_qc