03_LNcluster.bsub

#!/bin/bash
#BSUB -q long                          #Set you submission
#BSUB -J LNcluster                     #Name of the job
#BSUB -n 1                             #Request a core
#BSUB -R "rusage[mem=32GB]"            #Request a total memory limit of 32GB for the job
#BSUB -o /your/out/dir/LN_cluster.out  #Give path for the out file
#BSUB -e /your/err/dir/LN_cluster.err  #Give path for the err file


# Load modules
module load R/4.3.0


# set script dir
cd /scripts
# Rscript

Rscript --slave --no-restore --no-save scripts/00_compare_hclust_methods.R
Rscript --slave --no-restore --no-save scripts/01_phenocluster.R