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Support more fasta file extensions #20

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jnalanko opened this issue Nov 20, 2021 · 1 comment
Open

Support more fasta file extensions #20

jnalanko opened this issue Nov 20, 2021 · 1 comment

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@jnalanko
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Hi, COBS is slightly inconvenient for me to use because it does not recognize the .fna file extension for fasta files. I suggest supporting all common fasta file extensions. For example, Wikipedia lists the extensions .fasta, .fna, .ffn, .faa, .frn and .fa.
@bingmann
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Good idea. Please open a PR.

leoisl added a commit to leoisl/cobs that referenced this issue Dec 7, 2023
@leoisl
Now enabling querying reads from fastq.gz files
8a08867 
Closes bingmann#20
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@jnalanko @bingmann