Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

OS X build + integration tests #9

Merged
merged 77 commits into from
Jul 14, 2022
Merged

Conversation

leoisl
Copy link

@leoisl leoisl commented Jul 4, 2022

This PR fixes COBS build for OS X and adds 6 integration tests to ensure it is working on Mac for the MOF paper. However, the AIO feature is removed for the OS X build (still works on linux). Closes bingmann#11

leandro and others added 30 commits July 29, 2020 22:50
* Now using bit-sized pixels;
* Redimensioning the image to a fixed width;
* Outputting split images
* Added number_of_rows_per_batch parameter;
* Removed tiff compression methods by default - png is good enough;
* Now extracting COBS header and writing it in a separate, uncompressed binary file;
…index

... and a self check mechanism when compressing the index
Support all fasta file extensions listed in Wikipedia
@leoisl
Copy link
Author

leoisl commented Jul 4, 2022

@iqbal-lab is there anyone I should add as a reviewer, or am I free to merge whenever I want?

@leoisl
Copy link
Author

leoisl commented Jul 14, 2022

Pinging you again @iqbal-lab , as I have to merge this very soon

@iqbal-lab
Copy link

go ahead!

@iqbal-lab iqbal-lab merged commit bf6058b into iqbal-lab-org:master Jul 14, 2022
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

Error when using make -j4
4 participants